RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 NISCHQ9Y2I1 1504 aa38.28■■■■□ 3.72
CROCCP2-202ENST00000412962 CCDC180Q9P1Z9 1646 aa33.03■■■□□ 2.88
CROCCP2-202ENST00000412962 ZCCHC6Q5VYS8 1495 aaKnown RBP32.27■■■□□ 2.76
CROCCP2-202ENST00000412962 SHROOM4Q9ULL8 1493 aa31.87■■■□□ 2.69
CROCCP2-202ENST00000412962 DCAF8L2P0C7V8 631 aa31.64■■■□□ 2.66
CROCCP2-202ENST00000412962 DCAF1Q9Y4B6 1507 aa31.54■■■□□ 2.64
CROCCP2-202ENST00000412962 SUPT5HO00267 1087 aaKnown RBP30.93■■■□□ 2.54
CROCCP2-202ENST00000412962 ABCC9O60706 1549 aa30.91■■■□□ 2.54
CROCCP2-202ENST00000412962 MYO15BQ96JP2 1530 aa30.91■■■□□ 2.54
CROCCP2-202ENST00000412962 SCRIBQ14160 1630 aa30.64■■■□□ 2.5
CROCCP2-202ENST00000412962 NACADO15069 1562 aa30.64■■■□□ 2.5
CROCCP2-202ENST00000412962 RB1CC1Q8TDY2 1594 aa30.27■■■□□ 2.44
CROCCP2-202ENST00000412962 RSF1Q96T23 1441 aaPredicted RBP29.96■■■□□ 2.39
CROCCP2-202ENST00000412962 CHIC1Q5VXU3 224 aa29.82■■■□□ 2.36
CROCCP2-202ENST00000412962 CECR2Q9BXF3 1484 aa29.79■■■□□ 2.36
CROCCP2-202ENST00000412962 UNC13AQ9UPW8 1703 aa29.78■■■□□ 2.36
CROCCP2-202ENST00000412962 MROH2BQ7Z745 1585 aa29.67■■■□□ 2.34
CROCCP2-202ENST00000412962 BAZ1AQ9NRL2 1556 aaPredicted RBP29.49■■■□□ 2.31
CROCCP2-202ENST00000412962 WIZO95785 1651 aa29.48■■■□□ 2.31
CROCCP2-202ENST00000412962 BICRAQ9NZM4 1560 aa29.41■■■□□ 2.3
CROCCP2-202ENST00000412962 SMARCA4P51532 1647 aa29.33■■■□□ 2.29
CROCCP2-202ENST00000412962 PABPN1Q86U42 306 aaKnown RBP eCLIP29.32■■■□□ 2.284e-13■□□□□ 10.5
CROCCP2-202ENST00000412962 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
CROCCP2-202ENST00000412962 TRIM41Q8WV44 630 aa28.95■■■□□ 2.22
CROCCP2-202ENST00000412962 SMARCA2P51531 1590 aa28.88■■■□□ 2.21
CROCCP2-202ENST00000412962 EIF4G1Q04637 1599 aaKnown RBP28.87■■■□□ 2.21
CROCCP2-202ENST00000412962 CCDC88BA6NC98 1476 aa28.86■■■□□ 2.21
CROCCP2-202ENST00000412962 PEG3Q9GZU2 1588 aa28.86■■■□□ 2.21
CROCCP2-202ENST00000412962 LOC105371045A0A1W2PR82 267 aa28.8■■■□□ 2.2
CROCCP2-202ENST00000412962 ATAD2BQ9ULI0 1458 aa28.69■■■□□ 2.18
CROCCP2-202ENST00000412962 BAZ1BQ9UIG0 1483 aaKnown RBP28.58■■■□□ 2.17
CROCCP2-202ENST00000412962 FAM9AQ8IZU1 332 aaPredicted RBP28.56■■■□□ 2.16
CROCCP2-202ENST00000412962 ABCC8Q09428 1581 aa28.52■■■□□ 2.16
CROCCP2-202ENST00000412962 HMGXB3Q12766 1538 aa28.3■■■□□ 2.12
CROCCP2-202ENST00000412962 NCAPD3P42695 1498 aa28.29■■■□□ 2.12
CROCCP2-202ENST00000412962 EHMT2Q96KQ7 1210 aa28.24■■■□□ 2.11
CROCCP2-202ENST00000412962 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
CROCCP2-202ENST00000412962 PCGF6Q9BYE7 350 aa28.1■■■□□ 2.09
CROCCP2-202ENST00000412962 SOGA1O94964 1423 aa28.09■■■□□ 2.09
CROCCP2-202ENST00000412962 SYNJ1O43426 1573 aa28.08■■■□□ 2.09
CROCCP2-202ENST00000412962 EEA1Q15075 1411 aa27.99■■■□□ 2.07
CROCCP2-202ENST00000412962 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
CROCCP2-202ENST00000412962 CC2D2AQ9P2K1 1620 aa27.93■■■□□ 2.06
CROCCP2-202ENST00000412962 CSRNP3Q8WYN3 585 aa27.88■■■□□ 2.05
CROCCP2-202ENST00000412962 TOP2BQ02880 1626 aa27.86■■■□□ 2.05
CROCCP2-202ENST00000412962 CFTRP13569 1480 aa27.86■■■□□ 2.05
CROCCP2-202ENST00000412962 TRIM26Q12899 539 aaPredicted RBP27.83■■■□□ 2.05
CROCCP2-202ENST00000412962 BIVM-ERCC5R4GMW8 1640 aa27.8■■■□□ 2.04
CROCCP2-202ENST00000412962 PRDM2Q13029 1718 aa27.74■■■□□ 2.03
CROCCP2-202ENST00000412962 TNIKQ9UKE5 1360 aa27.72■■■□□ 2.03
CROCCP2-202ENST00000412962 GOLGA3Q08378 1498 aa27.71■■■□□ 2.03
CROCCP2-202ENST00000412962 HRCP23327 699 aa27.69■■■□□ 2.02
CROCCP2-202ENST00000412962 CUX1P39880 1505 aa27.69■■■□□ 2.02
CROCCP2-202ENST00000412962 CEP162Q5TB80 1403 aa27.68■■■□□ 2.02
CROCCP2-202ENST00000412962 UBTFP17480 764 aaKnown RBP27.65■■■□□ 2.02
CROCCP2-202ENST00000412962 KIF21BO75037 1637 aa27.65■■■□□ 2.02
CROCCP2-202ENST00000412962 CADPSQ9ULU8 1353 aa27.65■■■□□ 2.02
CROCCP2-202ENST00000412962 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.02
CROCCP2-202ENST00000412962 PPARGC1BQ86YN6 1023 aaKnown RBP27.62■■■□□ 2.01
CROCCP2-202ENST00000412962 RAPGEF2Q9Y4G8 1499 aa27.48■■□□□ 1.99
CROCCP2-202ENST00000412962 KIF27Q86VH2 1401 aa27.4■■□□□ 1.98
CROCCP2-202ENST00000412962 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
CROCCP2-202ENST00000412962 PRXQ9BXM0 1461 aa27.35■■□□□ 1.97
CROCCP2-202ENST00000412962 ERICH3Q5RHP9 1530 aa27.34■■□□□ 1.97
CROCCP2-202ENST00000412962 NESP48681 1621 aa27.34■■□□□ 1.97
CROCCP2-202ENST00000412962 CLIP1P30622 1438 aa27.33■■□□□ 1.96
CROCCP2-202ENST00000412962 FGD5Q6ZNL6 1462 aa27.3■■□□□ 1.96
CROCCP2-202ENST00000412962 CUX2O14529 1486 aa27.25■■□□□ 1.95
CROCCP2-202ENST00000412962 LAMC3Q9Y6N6 1575 aa27.24■■□□□ 1.95
CROCCP2-202ENST00000412962 DNMBPQ6XZF7 1577 aa27.21■■□□□ 1.95
CROCCP2-202ENST00000412962 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
CROCCP2-202ENST00000412962 TTBK1Q5TCY1 1321 aaPredicted RBP27.18■■□□□ 1.94
CROCCP2-202ENST00000412962 RANGAP1P46060 587 aaPredicted RBP27.16■■□□□ 1.94
CROCCP2-202ENST00000412962 TOPBP1Q92547 1522 aa27.15■■□□□ 1.94
CROCCP2-202ENST00000412962 VPS8Q8N3P4 1428 aa27.14■■□□□ 1.94
CROCCP2-202ENST00000412962 IGF1RP08069 1367 aa27.1■■□□□ 1.93
CROCCP2-202ENST00000412962 POLA1P09884 1462 aaPredicted RBP27.07■■□□□ 1.92
CROCCP2-202ENST00000412962 RAD54L2Q9Y4B4 1467 aa27.05■■□□□ 1.92
CROCCP2-202ENST00000412962 PDS5BQ9NTI5 1447 aa27.03■■□□□ 1.92
CROCCP2-202ENST00000412962 URB2Q14146 1524 aaKnown RBP27.02■■□□□ 1.92
CROCCP2-202ENST00000412962 ABCA10Q8WWZ4 1543 aa27.01■■□□□ 1.91
CROCCP2-202ENST00000412962 CARMIL1Q5VZK9 1371 aa26.99■■□□□ 1.91
CROCCP2-202ENST00000412962 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
CROCCP2-202ENST00000412962 KIF21AQ7Z4S6 1674 aa26.97■■□□□ 1.91
CROCCP2-202ENST00000412962 ZEB1P37275 1124 aaPredicted RBP26.96■■□□□ 1.91
CROCCP2-202ENST00000412962 APLP2Q06481 763 aa26.92■■□□□ 1.9
CROCCP2-202ENST00000412962 WDR97A6NE52 1622 aa26.89■■□□□ 1.89
CROCCP2-202ENST00000412962 ARHGAP35Q9NRY4 1499 aa26.87■■□□□ 1.89
CROCCP2-202ENST00000412962 CUL7Q14999 1698 aa26.8■■□□□ 1.88
CROCCP2-202ENST00000412962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.78■■□□□ 1.88
CROCCP2-202ENST00000412962 ABCA5Q8WWZ7 1642 aa26.76■■□□□ 1.87
CROCCP2-202ENST00000412962 TDRD9Q8NDG6 1382 aaKnown RBP26.73■■□□□ 1.87
CROCCP2-202ENST00000412962 CCER1Q8TC90 406 aaPredicted RBP26.7■■□□□ 1.87
CROCCP2-202ENST00000412962 GAPVD1Q14C86 1478 aa26.69■■□□□ 1.86
CROCCP2-202ENST00000412962 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
CROCCP2-202ENST00000412962 MRC2Q9UBG0 1479 aa26.67■■□□□ 1.86
CROCCP2-202ENST00000412962 CTTNBP2Q8WZ74 1663 aa26.64■■□□□ 1.85
CROCCP2-202ENST00000412962 KANK4Q5T7N3 995 aaPredicted RBP26.63■■□□□ 1.85
CROCCP2-202ENST00000412962 HNRNPUL2Q1KMD3 747 aaKnown RBP26.58■■□□□ 1.84
CROCCP2-202ENST00000412962 PELP1Q8IZL8 1130 aaKnown RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms