RNA–Protein interactions for RNA: ENST00000411861.5

H19-202, H19, imprinted maternally expressed transcript, humanhuman

TSL 2

Gene H19, Length 1,771 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H19-202ENST00000411861 NISCHQ9Y2I1 1504 aa50.01■■■■■ 5.6
H19-202ENST00000411861 CCDC180Q9P1Z9 1646 aa43.35■■■■■ 4.53
H19-202ENST00000411861 ZCCHC6Q5VYS8 1495 aaKnown RBP42.12■■■■■ 4.33
H19-202ENST00000411861 ABCC9O60706 1549 aa41.73■■■■■ 4.27
H19-202ENST00000411861 DCAF1Q9Y4B6 1507 aa41.4■■■■■ 4.22
H19-202ENST00000411861 SHROOM4Q9ULL8 1493 aa41.07■■■■■ 4.16
H19-202ENST00000411861 DCAF8L2P0C7V8 631 aa41.02■■■■■ 4.16
H19-202ENST00000411861 MYO15BQ96JP2 1530 aa40.72■■■■■ 4.11
H19-202ENST00000411861 NACADO15069 1562 aa40.34■■■■■ 4.05
H19-202ENST00000411861 RB1CC1Q8TDY2 1594 aa40.22■■■■■ 4.03
H19-202ENST00000411861 SCRIBQ14160 1630 aa39.88■■■■□ 3.97
H19-202ENST00000411861 SUPT5HO00267 1087 aaKnown RBP39.81■■■■□ 3.96
H19-202ENST00000411861 UNC13AQ9UPW8 1703 aa39.36■■■■□ 3.89
H19-202ENST00000411861 PABPN1Q86U42 306 aaKnown RBP eCLIP39.24■■■■□ 3.87
H19-202ENST00000411861 BICRAQ9NZM4 1560 aa39.1■■■■□ 3.85
H19-202ENST00000411861 RSF1Q96T23 1441 aaPredicted RBP39.01■■■■□ 3.83
H19-202ENST00000411861 CECR2Q9BXF3 1484 aa38.79■■■■□ 3.8
H19-202ENST00000411861 MROH2BQ7Z745 1585 aa38.63■■■■□ 3.78
H19-202ENST00000411861 BAZ1AQ9NRL2 1556 aaPredicted RBP38.56■■■■□ 3.76
H19-202ENST00000411861 CHIC1Q5VXU3 224 aa38.46■■■■□ 3.75
H19-202ENST00000411861 WIZO95785 1651 aa38.32■■■■□ 3.73
H19-202ENST00000411861 SMARCA4P51532 1647 aa38.31■■■■□ 3.72
H19-202ENST00000411861 EIF4G1Q04637 1599 aaKnown RBP37.98■■■■□ 3.67
H19-202ENST00000411861 TOP2AP11388 1531 aaKnown RBP37.98■■■■□ 3.67
H19-202ENST00000411861 PEG3Q9GZU2 1588 aa37.87■■■■□ 3.65
H19-202ENST00000411861 DNAJC5BQ9UF47 199 aa37.8■■■■□ 3.64
H19-202ENST00000411861 CC2D2AQ9P2K1 1620 aa37.67■■■■□ 3.62
H19-202ENST00000411861 SMARCA2P51531 1590 aa37.63■■■■□ 3.62
H19-202ENST00000411861 CCDC88BA6NC98 1476 aa37.6■■■■□ 3.61
H19-202ENST00000411861 ATAD2BQ9ULI0 1458 aa37.57■■■■□ 3.6
H19-202ENST00000411861 TRIM41Q8WV44 630 aa37.43■■■■□ 3.58
H19-202ENST00000411861 BAZ1BQ9UIG0 1483 aaKnown RBP37.36■■■■□ 3.57
H19-202ENST00000411861 NCAPD3P42695 1498 aa37.29■■■■□ 3.56
H19-202ENST00000411861 HMGXB3Q12766 1538 aa37.16■■■■□ 3.54
H19-202ENST00000411861 LOC105371045A0A1W2PR82 267 aa36.96■■■■□ 3.51
H19-202ENST00000411861 ABCC8Q09428 1581 aa36.93■■■■□ 3.5
H19-202ENST00000411861 FAM9AQ8IZU1 332 aaPredicted RBP36.69■■■■□ 3.46
H19-202ENST00000411861 WRNQ14191 1432 aaPredicted RBP eCLIP36.69■■■■□ 3.46
H19-202ENST00000411861 EEA1Q15075 1411 aa36.49■■■■□ 3.43
H19-202ENST00000411861 CFTRP13569 1480 aa36.49■■■■□ 3.43
H19-202ENST00000411861 SYNJ1O43426 1573 aa36.49■■■■□ 3.43
H19-202ENST00000411861 SOGA1O94964 1423 aa36.38■■■■□ 3.41
H19-202ENST00000411861 NESP48681 1621 aa36.35■■■■□ 3.41
H19-202ENST00000411861 TOP2BQ02880 1626 aa36.33■■■■□ 3.41
H19-202ENST00000411861 CADPSQ9ULU8 1353 aa36.29■■■■□ 3.4
H19-202ENST00000411861 PRDM2Q13029 1718 aa36.29■■■■□ 3.4
H19-202ENST00000411861 BIVM-ERCC5R4GMW8 1640 aa36.28■■■■□ 3.4
H19-202ENST00000411861 CSRNP3Q8WYN3 585 aa36.2■■■■□ 3.39
H19-202ENST00000411861 RUSC2Q8N2Y8 1516 aa36.2■■■■□ 3.39
H19-202ENST00000411861 LAMC3Q9Y6N6 1575 aa36.12■■■■□ 3.37
H19-202ENST00000411861 EHMT2Q96KQ7 1210 aa36.1■■■■□ 3.37
H19-202ENST00000411861 CUX1P39880 1505 aa36.09■■■■□ 3.37
H19-202ENST00000411861 TNIKQ9UKE5 1360 aa35.99■■■■□ 3.35
H19-202ENST00000411861 GOLGA3Q08378 1498 aa35.96■■■■□ 3.35
H19-202ENST00000411861 KIF21BO75037 1637 aa35.95■■■■□ 3.35
H19-202ENST00000411861 CEP164Q9UPV0 1460 aa35.93■■■■□ 3.34
H19-202ENST00000411861 PDS5BQ9NTI5 1447 aa35.91■■■■□ 3.34
H19-202ENST00000411861 FANCD2Q9BXW9 1451 aa35.88■■■■□ 3.33
H19-202ENST00000411861 PCGF6Q9BYE7 350 aa35.82■■■■□ 3.33
H19-202ENST00000411861 ERCC6Q03468 1493 aa35.81■■■■□ 3.32
H19-202ENST00000411861 CEP162Q5TB80 1403 aa35.79■■■■□ 3.32
H19-202ENST00000411861 KIF21AQ7Z4S6 1674 aa35.79■■■■□ 3.32
H19-202ENST00000411861 TRIM26Q12899 539 aaPredicted RBP35.75■■■■□ 3.31
H19-202ENST00000411861 UBTFP17480 764 aaKnown RBP35.74■■■■□ 3.31
H19-202ENST00000411861 KIF27Q86VH2 1401 aa35.72■■■■□ 3.31
H19-202ENST00000411861 PRXQ9BXM0 1461 aa35.63■■■■□ 3.29
H19-202ENST00000411861 ERICH3Q5RHP9 1530 aa35.63■■■■□ 3.29
H19-202ENST00000411861 RAPGEF2Q9Y4G8 1499 aa35.62■■■■□ 3.29
H19-202ENST00000411861 DNMBPQ6XZF7 1577 aa35.61■■■■□ 3.29
H19-202ENST00000411861 FGD5Q6ZNL6 1462 aa35.6■■■■□ 3.29
H19-202ENST00000411861 MRC2Q9UBG0 1479 aa35.52■■■■□ 3.28
H19-202ENST00000411861 URB2Q14146 1524 aaKnown RBP35.5■■■■□ 3.27
H19-202ENST00000411861 TOPBP1Q92547 1522 aa35.5■■■■□ 3.27
H19-202ENST00000411861 CUX2O14529 1486 aa35.47■■■■□ 3.27
H19-202ENST00000411861 THOC2Q8NI27 1593 aaKnown RBP35.47■■■■□ 3.27
H19-202ENST00000411861 CLIP1P30622 1438 aa35.41■■■■□ 3.26
H19-202ENST00000411861 POLA1P09884 1462 aaPredicted RBP35.37■■■■□ 3.25
H19-202ENST00000411861 IGF1RP08069 1367 aa35.36■■■■□ 3.25
H19-202ENST00000411861 WDR62O43379 1518 aa35.35■■■■□ 3.25
H19-202ENST00000411861 ABCA10Q8WWZ4 1543 aa35.34■■■■□ 3.25
H19-202ENST00000411861 HRCP23327 699 aa35.28■■■■□ 3.24
H19-202ENST00000411861 RAD54L2Q9Y4B4 1467 aa35.24■■■■□ 3.23
H19-202ENST00000411861 VPS8Q8N3P4 1428 aa35.19■■■■□ 3.22
H19-202ENST00000411861 CARMIL1Q5VZK9 1371 aa35.18■■■■□ 3.22
H19-202ENST00000411861 WDR97A6NE52 1622 aa35.15■■■■□ 3.22
H19-202ENST00000411861 PPARGC1BQ86YN6 1023 aaKnown RBP35.11■■■■□ 3.21
H19-202ENST00000411861 CUL7Q14999 1698 aa35.02■■■■□ 3.2
H19-202ENST00000411861 ARAP1Q96P48 1450 aa34.99■■■■□ 3.19
H19-202ENST00000411861 ABCA5Q8WWZ7 1642 aa34.99■■■■□ 3.19
H19-202ENST00000411861 TARBP1Q13395 1621 aaKnown RBP34.93■■■■□ 3.18
H19-202ENST00000411861 IFT140Q96RY7 1462 aa34.92■■■■□ 3.18
H19-202ENST00000411861 RANGAP1P46060 587 aaPredicted RBP34.91■■■■□ 3.18
H19-202ENST00000411861 ARHGAP35Q9NRY4 1499 aa34.89■■■■□ 3.18
H19-202ENST00000411861 GAPVD1Q14C86 1478 aa34.88■■■■□ 3.17
H19-202ENST00000411861 ZNF608Q9ULD9 1512 aaPredicted RBP34.86■■■■□ 3.17
H19-202ENST00000411861 TDRD9Q8NDG6 1382 aaKnown RBP34.85■■■■□ 3.17
H19-202ENST00000411861 APLP2Q06481 763 aa34.82■■■■□ 3.16
H19-202ENST00000411861 AQRO60306 1485 aaKnown RBP eCLIP34.77■■■■□ 3.16
H19-202ENST00000411861 TTBK1Q5TCY1 1321 aaPredicted RBP34.7■■■■□ 3.15
H19-202ENST00000411861 CTTNBP2Q8WZ74 1663 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms