RNA–Protein interactions for RNA: ENST00000411612.5

GSE1-204, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-204ENST00000411612 PUM1Q14671 1186 aaKnown RBP eCLIP22.55■■□□□ 1.23e-14■□□□□ 10.5
GSE1-204ENST00000411612 SF3A3Q12874 501 aaKnown RBP eCLIP19.13■□□□□ 0.656e-14■■■■■ 52
GSE1-204ENST00000411612 YBX3P16989 372 aaKnown RBP eCLIP28.65■■■□□ 2.181e-13■□□□□ 10
GSE1-204ENST00000411612 PUS1Q9Y606 427 aaKnown RBP eCLIP16.25■□□□□ 0.194e-12■■■■■ 30
GSE1-204ENST00000411612 ILF3Q12906 894 aaKnown RBP eCLIP21.67■■□□□ 1.066e-10■■■□□ 17.1
GSE1-204ENST00000411612 AQRO60306 1485 aaKnown RBP eCLIP38.48■■■■□ 3.751e-9■■■■■ 32.1
GSE1-204ENST00000411612 PCBP1Q15365 356 aaKnown RBP eCLIP24.31■■□□□ 1.482e-9■■■■□ 26.7
GSE1-204ENST00000411612 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.22■■□□□ 1.153e-9■■□□□ 14.2
GSE1-204ENST00000411612 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.93■■□□□ 1.586e-9■■□□□ 13.8
GSE1-204ENST00000411612 EWSR1Q01844 656 aaKnown RBP eCLIP15.88■□□□□ 0.137e-9■■■■■ 34.3
GSE1-204ENST00000411612 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.31■■□□□ 12e-8■■■■□ 24.9
GSE1-204ENST00000411612 NPM1P06748 294 aaKnown RBP eCLIP36.54■■■■□ 3.445e-8■■■■■ 57.5
GSE1-204ENST00000411612 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.58■□□□□ 0.578e-8■■■□□ 18.1
GSE1-204ENST00000411612 SF3B4Q15427 424 aaKnown RBP eCLIP19.89■□□□□ 0.771e-7■■■□□ 19.2
GSE1-204ENST00000411612 TARDBPQ13148 414 aaKnown RBP eCLIP21.72■■□□□ 1.071e-7■■■□□ 16.8
GSE1-204ENST00000411612 XRCC6P12956 609 aaKnown RBP eCLIP24.4■■□□□ 1.51e-7■■■■□ 19.5
GSE1-204ENST00000411612 SAFB2Q14151 953 aaKnown RBP eCLIP31.44■■■□□ 2.622e-7■□□□□ 9.6
GSE1-204ENST00000411612 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.41■■□□□ 1.822e-7■■□□□ 12.2
GSE1-204ENST00000411612 PCBP2Q15366 365 aaKnown RBP eCLIP20.51■□□□□ 0.872e-7■■■■■ 38
GSE1-204ENST00000411612 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.46■■□□□ 1.832e-7■□□□□ 9.3
GSE1-204ENST00000411612 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.25■□□□□ 0.832e-7■■■■■ 39.6
GSE1-204ENST00000411612 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.39■□□□□ 0.854e-7■■■■□ 20.3
GSE1-204ENST00000411612 NONOQ15233 471 aaKnown RBP eCLIP24.7■■□□□ 1.544e-7■■■■□ 23
GSE1-204ENST00000411612 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.57■■■□□ 2.964e-7■■■■■ 77.9
GSE1-204ENST00000411612 GTF2F1P35269 517 aaKnown RBP eCLIP24■■□□□ 1.434e-7■■■■□ 22
GSE1-204ENST00000411612 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.63■□□□□ 0.734e-7■■■■□ 25.4
GSE1-204ENST00000411612 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.1■■□□□ 1.135e-7■■■□□ 17.8
GSE1-204ENST00000411612 PPIGQ13427 754 aaKnown RBP eCLIP25.01■■□□□ 1.595e-7■□□□□ 8.2
GSE1-204ENST00000411612 EFTUD2Q15029 972 aaKnown RBP eCLIP20.59■□□□□ 0.895e-7■■■■■ 31.4
GSE1-204ENST00000411612 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.96■■□□□ 1.276e-7■■■■□ 19.3
GSE1-204ENST00000411612 RBM22Q9NW64 420 aaKnown RBP eCLIP21.88■■□□□ 1.096e-7■■■■□ 20.6
GSE1-204ENST00000411612 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.61■■□□□ 1.376e-7■■■■□ 19.7
GSE1-204ENST00000411612 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.07■■□□□ 1.287e-7■■■■■ 122.1
GSE1-204ENST00000411612 DDX6P26196 483 aaKnown RBP eCLIP23.28■■□□□ 1.327e-7■■■■■ 111.7
GSE1-204ENST00000411612 RBFOX2O43251 390 aaKnown RBP eCLIP16.87■□□□□ 0.297e-7■■■■■ 60.6
GSE1-204ENST00000411612 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.77■■□□□ 1.727e-7■■■□□ 18.1
GSE1-204ENST00000411612 LSM11P83369 360 aaKnown RBP eCLIP18.88■□□□□ 0.617e-7■■■■□ 21.3
GSE1-204ENST00000411612 FTOQ9C0B1 505 aaKnown RBP eCLIP24.75■■□□□ 1.557e-7■■■□□ 18.9
GSE1-204ENST00000411612 TIA1P31483 386 aaKnown RBP eCLIP20.12■□□□□ 0.817e-7■■□□□ 14.5
GSE1-204ENST00000411612 ZC3H11AO75152 810 aaKnown RBP eCLIP24.04■■□□□ 1.448e-7■■□□□ 13.7
GSE1-204ENST00000411612 AGGF1Q8N302 714 aaeCLIP21.08■□□□□ 0.978e-7■■■□□ 15.2
GSE1-204ENST00000411612 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.74■■□□□ 1.718e-7■■■■■ 30.9
GSE1-204ENST00000411612 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.65■■□□□ 1.228e-7■■■□□ 18.9
GSE1-204ENST00000411612 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.14■□□□□ 0.499e-7■■■■□ 20.4
GSE1-204ENST00000411612 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.57■■□□□ 1.29e-7■■■□□ 18.9
GSE1-204ENST00000411612 SMNDC1O75940 238 aaKnown RBP eCLIP19.49■□□□□ 0.719e-7■■■■□ 26.7
GSE1-204ENST00000411612 FUSP35637 526 aaKnown RBP eCLIP14.42□□□□□ -0.19e-7■■■□□ 16.9
GSE1-204ENST00000411612 PTBP1P26599 531 aaKnown RBP eCLIP16.69■□□□□ 0.269e-7■■■■□ 20.2
GSE1-204ENST00000411612 NKRFO15226 690 aaKnown RBP eCLIP25.27■■□□□ 1.641e-6■■■□□ 15.3
GSE1-204ENST00000411612 EIF4G2P78344 907 aaKnown RBP eCLIP30.4■■■□□ 2.461e-6■■■□□ 15
GSE1-204ENST00000411612 EIF3DO15371 548 aaKnown RBP eCLIP23.67■■□□□ 1.381e-6■■□□□ 12
GSE1-204ENST00000411612 SFPQP23246 707 aaKnown RBP eCLIP24.32■■□□□ 1.481e-6■■■□□ 16.1
GSE1-204ENST00000411612 AARSP49588 968 aaKnown RBP eCLIP23.68■■□□□ 1.381e-6■■■■□ 24.4
GSE1-204ENST00000411612 SF3B1O75533 1304 aaKnown RBP eCLIP23.85■■□□□ 1.411e-6■■■■■ 69.6
GSE1-204ENST00000411612 YWHAGP61981 247 aaKnown RBP eCLIP22.88■■□□□ 1.251e-6■■□□□ 12.3
GSE1-204ENST00000411612 TAF15Q92804 592 aaKnown RBP eCLIP17.67■□□□□ 0.421e-6■■□□□ 14.3
GSE1-204ENST00000411612 FKBP4Q02790 459 aaKnown RBP eCLIP28.02■■■□□ 2.081e-6■■■■□ 23.5
GSE1-204ENST00000411612 LARP4Q71RC2 724 aaKnown RBP eCLIP19.9■□□□□ 0.781e-6■■□□□ 13.9
GSE1-204ENST00000411612 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.05■□□□□ 0.961e-6■■■□□ 15.5
GSE1-204ENST00000411612 HNRNPKP61978 463 aaKnown RBP eCLIP21.95■■□□□ 1.12e-6■■■■□ 23.8
GSE1-204ENST00000411612 ZRANB2O95218 330 aaKnown RBP eCLIP21.83■■□□□ 1.092e-6■■■□□ 16.9
GSE1-204ENST00000411612 METAP2P50579 478 aaKnown RBP eCLIP25.06■■□□□ 1.62e-6■■■□□ 17.2
GSE1-204ENST00000411612 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21■□□□□ 0.952e-6■■■□□ 15.1
GSE1-204ENST00000411612 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.45■□□□□ 0.862e-6■■■■■ 50.5
GSE1-204ENST00000411612 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.55■□□□□ 0.882e-6■■■■■ 164.5
GSE1-204ENST00000411612 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.26■■■■□ 3.232e-6■■■■□ 22.3
GSE1-204ENST00000411612 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.41■■□□□ 1.52e-6■■■■■ 28.4
GSE1-204ENST00000411612 HNRNPMP52272 730 aaKnown RBP eCLIP34.41■■■■□ 3.12e-6■■■□□ 16.3
GSE1-204ENST00000411612 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.81■□□□□ 0.762e-6■■■■□ 23.1
GSE1-204ENST00000411612 NOLC1Q14978 699 aaKnown RBP eCLIP23.85■■□□□ 1.412e-6■■□□□ 12.3
GSE1-204ENST00000411612 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.7■■■□□ 2.832e-6■■■■■ 45.3
GSE1-204ENST00000411612 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.92■■□□□ 1.742e-6■■■■□ 23.7
GSE1-204ENST00000411612 RBM5P52756 815 aaKnown RBP eCLIP26.98■■□□□ 1.912e-6■■■□□ 18.2
GSE1-204ENST00000411612 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.66■■□□□ 1.222e-6■■■□□ 18.9
GSE1-204ENST00000411612 NCBP2P52298 156 aaKnown RBP eCLIP19.97■□□□□ 0.792e-6■■■■■ 27.5
GSE1-204ENST00000411612 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.02■■□□□ 1.283e-6■■■■□ 19.3
GSE1-204ENST00000411612 NIPBLQ6KC79 2804 aaeCLIP19.07■□□□□ 0.643e-6■■■□□ 17.4
GSE1-204ENST00000411612 FXR2P51116 673 aaKnown RBP eCLIP24.32■■□□□ 1.483e-6■□□□□ 9
GSE1-204ENST00000411612 AATFQ9NY61 560 aaKnown RBP eCLIP26.53■■□□□ 1.843e-6■■■□□ 16.8
GSE1-204ENST00000411612 WRNQ14191 1432 aaPredicted RBP eCLIP38.33■■■■□ 3.733e-6■■■■□ 26.6
GSE1-204ENST00000411612 AKAP1Q92667 903 aaKnown RBP eCLIP19.15■□□□□ 0.664e-6■■■□□ 17.7
GSE1-204ENST00000411612 TROVE2P10155 538 aaKnown RBP eCLIP19.35■□□□□ 0.694e-6■□□□□ 9.4
GSE1-204ENST00000411612 DDX21Q9NR30 783 aaKnown RBP eCLIP28.36■■■□□ 2.134e-6■■□□□ 12.5
GSE1-204ENST00000411612 CDC40O60508 579 aaKnown RBP eCLIP20■□□□□ 0.794e-6■■□□□ 12.3
GSE1-204ENST00000411612 SUB1P53999 127 aaKnown RBP eCLIP16.42■□□□□ 0.224e-6■■□□□ 11.8
GSE1-204ENST00000411612 PRPF4O43172 522 aaKnown RBP eCLIP20.78■□□□□ 0.924e-6■■■□□ 18.4
GSE1-204ENST00000411612 WDR43Q15061 677 aaKnown RBP eCLIP28.76■■■□□ 2.195e-6■■■□□ 18.8
GSE1-204ENST00000411612 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.9■■□□□ 1.267e-6■■■■■ 27.7
GSE1-204ENST00000411612 DDX42Q86XP3 938 aaKnown RBP eCLIP23.06■■□□□ 1.289e-6■□□□□ 9.6
Retrieved 89 of 89 RNA–protein pairs in 12 ms