RNA–Protein interactions for RNA: ENST00000409789.5

CNPPD1-202, Transcript of cyclin Pas1/PHO80 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNPPD1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNPPD1-202ENST00000409789 NISCHQ9Y2I1 1504 aa32.81■■■□□ 2.84
CNPPD1-202ENST00000409789 CCDC180Q9P1Z9 1646 aa28.57■■■□□ 2.16
CNPPD1-202ENST00000409789 ZCCHC6Q5VYS8 1495 aaKnown RBP27.5■■□□□ 1.99
CNPPD1-202ENST00000409789 ABCC9O60706 1549 aa27.43■■□□□ 1.98
CNPPD1-202ENST00000409789 DCAF8L2P0C7V8 631 aa27.36■■□□□ 1.97
CNPPD1-202ENST00000409789 SHROOM4Q9ULL8 1493 aa27.03■■□□□ 1.92
CNPPD1-202ENST00000409789 DCAF1Q9Y4B6 1507 aa27.01■■□□□ 1.91
CNPPD1-202ENST00000409789 SUPT5HO00267 1087 aaKnown RBP26.76■■□□□ 1.87
CNPPD1-202ENST00000409789 MYO15BQ96JP2 1530 aa26.73■■□□□ 1.87
CNPPD1-202ENST00000409789 NACADO15069 1562 aa26.69■■□□□ 1.86
CNPPD1-202ENST00000409789 RB1CC1Q8TDY2 1594 aa26.52■■□□□ 1.84
CNPPD1-202ENST00000409789 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
CNPPD1-202ENST00000409789 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
CNPPD1-202ENST00000409789 HRCP23327 699 aa26.33■■□□□ 1.81
CNPPD1-202ENST00000409789 UNC13AQ9UPW8 1703 aa26.1■■□□□ 1.77
CNPPD1-202ENST00000409789 PABPN1Q86U42 306 aaKnown RBP eCLIP25.92■■□□□ 1.74
CNPPD1-202ENST00000409789 PCGF6Q9BYE7 350 aa25.86■■□□□ 1.73
CNPPD1-202ENST00000409789 BICRAQ9NZM4 1560 aa25.85■■□□□ 1.73
CNPPD1-202ENST00000409789 CECR2Q9BXF3 1484 aa25.64■■□□□ 1.69
CNPPD1-202ENST00000409789 TRIM26Q12899 539 aaPredicted RBP25.48■■□□□ 1.67
CNPPD1-202ENST00000409789 LOC105371045A0A1W2PR82 267 aa25.47■■□□□ 1.67
CNPPD1-202ENST00000409789 PPARGC1BQ86YN6 1023 aaKnown RBP25.46■■□□□ 1.67
CNPPD1-202ENST00000409789 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
CNPPD1-202ENST00000409789 MROH2BQ7Z745 1585 aa25.42■■□□□ 1.66
CNPPD1-202ENST00000409789 BAZ1AQ9NRL2 1556 aaPredicted RBP25.29■■□□□ 1.64
CNPPD1-202ENST00000409789 SMARCA4P51532 1647 aa25.25■■□□□ 1.63
CNPPD1-202ENST00000409789 ZEB1P37275 1124 aaPredicted RBP25.24■■□□□ 1.63
CNPPD1-202ENST00000409789 WIZO95785 1651 aa25.2■■□□□ 1.62
CNPPD1-202ENST00000409789 EIF4G1Q04637 1599 aaKnown RBP25.06■■□□□ 1.6
CNPPD1-202ENST00000409789 TRIM41Q8WV44 630 aa25.03■■□□□ 1.6
CNPPD1-202ENST00000409789 ATAD2BQ9ULI0 1458 aa24.93■■□□□ 1.58
CNPPD1-202ENST00000409789 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
CNPPD1-202ENST00000409789 TOP2AP11388 1531 aaKnown RBP24.82■■□□□ 1.56
CNPPD1-202ENST00000409789 SMARCA2P51531 1590 aa24.8■■□□□ 1.56
CNPPD1-202ENST00000409789 CC2D2AQ9P2K1 1620 aa24.76■■□□□ 1.55
CNPPD1-202ENST00000409789 PELP1Q8IZL8 1130 aaKnown RBP24.74■■□□□ 1.55
CNPPD1-202ENST00000409789 BAZ1BQ9UIG0 1483 aaKnown RBP24.74■■□□□ 1.55
CNPPD1-202ENST00000409789 NCAPD3P42695 1498 aa24.7■■□□□ 1.54
CNPPD1-202ENST00000409789 CCDC88BA6NC98 1476 aa24.66■■□□□ 1.54
CNPPD1-202ENST00000409789 FAM9AQ8IZU1 332 aaPredicted RBP24.65■■□□□ 1.54
CNPPD1-202ENST00000409789 HMGXB3Q12766 1538 aa24.59■■□□□ 1.53
CNPPD1-202ENST00000409789 DNAJC5BQ9UF47 199 aa24.53■■□□□ 1.52
CNPPD1-202ENST00000409789 SCAF1Q9H7N4 1312 aaKnown RBP24.41■■□□□ 1.5
CNPPD1-202ENST00000409789 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
CNPPD1-202ENST00000409789 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
CNPPD1-202ENST00000409789 CCER1Q8TC90 406 aaPredicted RBP24.23■■□□□ 1.47
CNPPD1-202ENST00000409789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.17■■□□□ 1.46
CNPPD1-202ENST00000409789 ACIN1Q9UKV3 1341 aaKnown RBP24.15■■□□□ 1.46
CNPPD1-202ENST00000409789 ABCC8Q09428 1581 aa24.13■■□□□ 1.45
CNPPD1-202ENST00000409789 CFTRP13569 1480 aa24.11■■□□□ 1.45
CNPPD1-202ENST00000409789 EEA1Q15075 1411 aa24.11■■□□□ 1.45
CNPPD1-202ENST00000409789 TNIKQ9UKE5 1360 aa24.1■■□□□ 1.45
CNPPD1-202ENST00000409789 CADPSQ9ULU8 1353 aa24.08■■□□□ 1.45
CNPPD1-202ENST00000409789 CEP162Q5TB80 1403 aa24.06■■□□□ 1.44
CNPPD1-202ENST00000409789 NESP48681 1621 aa24.06■■□□□ 1.44
CNPPD1-202ENST00000409789 DIEXFQ68CQ4 756 aaKnown RBP24.02■■□□□ 1.44
CNPPD1-202ENST00000409789 CENPBP07199 599 aaPredicted RBP24.01■■□□□ 1.43
CNPPD1-202ENST00000409789 NEUROD1Q13562 356 aa23.97■■□□□ 1.43
CNPPD1-202ENST00000409789 CSRNP3Q8WYN3 585 aa23.91■■□□□ 1.42
CNPPD1-202ENST00000409789 SOGA1O94964 1423 aa23.9■■□□□ 1.42
CNPPD1-202ENST00000409789 PRDM2Q13029 1718 aa23.88■■□□□ 1.41
CNPPD1-202ENST00000409789 GOLGA3Q08378 1498 aa23.85■■□□□ 1.41
CNPPD1-202ENST00000409789 SYNJ1O43426 1573 aa23.85■■□□□ 1.41
CNPPD1-202ENST00000409789 LAMC3Q9Y6N6 1575 aa23.85■■□□□ 1.41
CNPPD1-202ENST00000409789 FANCD2Q9BXW9 1451 aa23.83■■□□□ 1.4
CNPPD1-202ENST00000409789 ZNF316A6NFI3 1004 aaPredicted RBP23.8■■□□□ 1.4
CNPPD1-202ENST00000409789 GTF3C3Q9Y5Q9 886 aa23.79■■□□□ 1.4
CNPPD1-202ENST00000409789 CUX1P39880 1505 aa23.75■■□□□ 1.39
CNPPD1-202ENST00000409789 UBTFP17480 764 aaKnown RBP23.74■■□□□ 1.39
CNPPD1-202ENST00000409789 RUSC2Q8N2Y8 1516 aa23.73■■□□□ 1.39
CNPPD1-202ENST00000409789 MYT1Q01538 1121 aa23.7■■□□□ 1.38
CNPPD1-202ENST00000409789 TOP2BQ02880 1626 aa23.69■■□□□ 1.38
CNPPD1-202ENST00000409789 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
CNPPD1-202ENST00000409789 CEP164Q9UPV0 1460 aa23.69■■□□□ 1.38
CNPPD1-202ENST00000409789 KIF21BO75037 1637 aa23.69■■□□□ 1.38
CNPPD1-202ENST00000409789 KIF21AQ7Z4S6 1674 aa23.67■■□□□ 1.38
CNPPD1-202ENST00000409789 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
CNPPD1-202ENST00000409789 TTBK1Q5TCY1 1321 aaPredicted RBP23.63■■□□□ 1.37
CNPPD1-202ENST00000409789 URB2Q14146 1524 aaKnown RBP23.57■■□□□ 1.36
CNPPD1-202ENST00000409789 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
CNPPD1-202ENST00000409789 CLIP1P30622 1438 aa23.54■■□□□ 1.36
CNPPD1-202ENST00000409789 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
CNPPD1-202ENST00000409789 FGD5Q6ZNL6 1462 aa23.51■■□□□ 1.35
CNPPD1-202ENST00000409789 DNMBPQ6XZF7 1577 aa23.51■■□□□ 1.35
CNPPD1-202ENST00000409789 ERCC6Q03468 1493 aa23.46■■□□□ 1.35
CNPPD1-202ENST00000409789 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
CNPPD1-202ENST00000409789 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
CNPPD1-202ENST00000409789 CLSPNQ9HAW4 1339 aa23.41■■□□□ 1.34
CNPPD1-202ENST00000409789 MRC2Q9UBG0 1479 aa23.41■■□□□ 1.34
CNPPD1-202ENST00000409789 HNRNPUL2Q1KMD3 747 aaKnown RBP23.4■■□□□ 1.34
CNPPD1-202ENST00000409789 APLP2Q06481 763 aa23.39■■□□□ 1.34
CNPPD1-202ENST00000409789 MIER1Q8N108 512 aa23.39■■□□□ 1.34
CNPPD1-202ENST00000409789 CUX2O14529 1486 aa23.33■■□□□ 1.32
CNPPD1-202ENST00000409789 RAPGEF2Q9Y4G8 1499 aa23.33■■□□□ 1.32
CNPPD1-202ENST00000409789 THOC2Q8NI27 1593 aaKnown RBP23.3■■□□□ 1.32
CNPPD1-202ENST00000409789 WDR62O43379 1518 aa23.29■■□□□ 1.32
CNPPD1-202ENST00000409789 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
CNPPD1-202ENST00000409789 YTHDC1Q96MU7 727 aaKnown RBP23.28■■□□□ 1.32
CNPPD1-202ENST00000409789 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
CNPPD1-202ENST00000409789 ABCA10Q8WWZ4 1543 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms