RNA–Protein interactions for RNA: ENST00000409735.8

PLD3-207, Transcript of phospholipase D family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLD3, Length 2,140 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-207ENST00000409735 NISCHQ9Y2I1 1504 aa39.85■■■■□ 3.97
PLD3-207ENST00000409735 CCDC180Q9P1Z9 1646 aa34.65■■■■□ 3.14
PLD3-207ENST00000409735 ZCCHC6Q5VYS8 1495 aaKnown RBP33.57■■■□□ 2.96
PLD3-207ENST00000409735 SHROOM4Q9ULL8 1493 aa32.98■■■□□ 2.87
PLD3-207ENST00000409735 ABCC9O60706 1549 aa32.92■■■□□ 2.86
PLD3-207ENST00000409735 DCAF8L2P0C7V8 631 aa32.92■■■□□ 2.86
PLD3-207ENST00000409735 DCAF1Q9Y4B6 1507 aa32.87■■■□□ 2.85
PLD3-207ENST00000409735 MYO15BQ96JP2 1530 aa32.46■■■□□ 2.79
PLD3-207ENST00000409735 NACADO15069 1562 aa32.3■■■□□ 2.76
PLD3-207ENST00000409735 RB1CC1Q8TDY2 1594 aa32.05■■■□□ 2.72
PLD3-207ENST00000409735 SUPT5HO00267 1087 aaKnown RBP31.95■■■□□ 2.71
PLD3-207ENST00000409735 SCRIBQ14160 1630 aa31.93■■■□□ 2.7
PLD3-207ENST00000409735 UNC13AQ9UPW8 1703 aa31.42■■■□□ 2.62
PLD3-207ENST00000409735 RSF1Q96T23 1441 aaPredicted RBP31.13■■■□□ 2.57
PLD3-207ENST00000409735 BICRAQ9NZM4 1560 aa31.12■■■□□ 2.57
PLD3-207ENST00000409735 PABPN1Q86U42 306 aaKnown RBP eCLIP31.06■■■□□ 2.56
PLD3-207ENST00000409735 CECR2Q9BXF3 1484 aa31■■■□□ 2.55
PLD3-207ENST00000409735 MROH2BQ7Z745 1585 aa30.86■■■□□ 2.53
PLD3-207ENST00000409735 CHIC1Q5VXU3 224 aa30.82■■■□□ 2.52
PLD3-207ENST00000409735 BAZ1AQ9NRL2 1556 aaPredicted RBP30.69■■■□□ 2.5
PLD3-207ENST00000409735 WIZO95785 1651 aa30.65■■■□□ 2.5
PLD3-207ENST00000409735 SMARCA4P51532 1647 aa30.57■■■□□ 2.48
PLD3-207ENST00000409735 TOP2AP11388 1531 aaKnown RBP30.26■■■□□ 2.43
PLD3-207ENST00000409735 EIF4G1Q04637 1599 aaKnown RBP30.19■■■□□ 2.42
PLD3-207ENST00000409735 PEG3Q9GZU2 1588 aa30.19■■■□□ 2.42
PLD3-207ENST00000409735 ATAD2BQ9ULI0 1458 aa30.1■■■□□ 2.41
PLD3-207ENST00000409735 SMARCA2P51531 1590 aa30.05■■■□□ 2.4
PLD3-207ENST00000409735 CCDC88BA6NC98 1476 aa30.01■■■□□ 2.4
PLD3-207ENST00000409735 TRIM41Q8WV44 630 aa29.95■■■□□ 2.38
PLD3-207ENST00000409735 BAZ1BQ9UIG0 1483 aaKnown RBP29.93■■■□□ 2.38
PLD3-207ENST00000409735 NCAPD3P42695 1498 aa29.84■■■□□ 2.37
PLD3-207ENST00000409735 HMGXB3Q12766 1538 aa29.78■■■□□ 2.36
PLD3-207ENST00000409735 CC2D2AQ9P2K1 1620 aa29.77■■■□□ 2.36
PLD3-207ENST00000409735 LOC105371045A0A1W2PR82 267 aa29.73■■■□□ 2.35
PLD3-207ENST00000409735 ABCC8Q09428 1581 aa29.58■■■□□ 2.33
PLD3-207ENST00000409735 FAM9AQ8IZU1 332 aaPredicted RBP29.49■■■□□ 2.31
PLD3-207ENST00000409735 WRNQ14191 1432 aaPredicted RBP eCLIP29.26■■■□□ 2.28
PLD3-207ENST00000409735 SYNJ1O43426 1573 aa29.17■■■□□ 2.26
PLD3-207ENST00000409735 CFTRP13569 1480 aa29.17■■■□□ 2.26
PLD3-207ENST00000409735 DNAJC5BQ9UF47 199 aa29.14■■■□□ 2.25
PLD3-207ENST00000409735 SOGA1O94964 1423 aa29.13■■■□□ 2.25
PLD3-207ENST00000409735 EHMT2Q96KQ7 1210 aa29.12■■■□□ 2.25
PLD3-207ENST00000409735 CADPSQ9ULU8 1353 aa29.09■■■□□ 2.25
PLD3-207ENST00000409735 EEA1Q15075 1411 aa29.03■■■□□ 2.24
PLD3-207ENST00000409735 RUSC2Q8N2Y8 1516 aa29.02■■■□□ 2.24
PLD3-207ENST00000409735 TOP2BQ02880 1626 aa28.96■■■□□ 2.23
PLD3-207ENST00000409735 PRDM2Q13029 1718 aa28.96■■■□□ 2.23
PLD3-207ENST00000409735 BIVM-ERCC5R4GMW8 1640 aa28.92■■■□□ 2.22
PLD3-207ENST00000409735 CSRNP3Q8WYN3 585 aa28.91■■■□□ 2.22
PLD3-207ENST00000409735 NESP48681 1621 aa28.9■■■□□ 2.22
PLD3-207ENST00000409735 PCGF6Q9BYE7 350 aa28.85■■■□□ 2.21
PLD3-207ENST00000409735 LAMC3Q9Y6N6 1575 aa28.82■■■□□ 2.2
PLD3-207ENST00000409735 CUX1P39880 1505 aa28.8■■■□□ 2.2
PLD3-207ENST00000409735 FANCD2Q9BXW9 1451 aa28.77■■■□□ 2.2
PLD3-207ENST00000409735 TNIKQ9UKE5 1360 aa28.72■■■□□ 2.19
PLD3-207ENST00000409735 GOLGA3Q08378 1498 aa28.7■■■□□ 2.19
PLD3-207ENST00000409735 KIF21BO75037 1637 aa28.68■■■□□ 2.18
PLD3-207ENST00000409735 TRIM26Q12899 539 aaPredicted RBP28.66■■■□□ 2.18
PLD3-207ENST00000409735 CEP164Q9UPV0 1460 aa28.65■■■□□ 2.18
PLD3-207ENST00000409735 CEP162Q5TB80 1403 aa28.64■■■□□ 2.17
PLD3-207ENST00000409735 PDS5BQ9NTI5 1447 aa28.62■■■□□ 2.17
PLD3-207ENST00000409735 UBTFP17480 764 aaKnown RBP28.6■■■□□ 2.17
PLD3-207ENST00000409735 KIF21AQ7Z4S6 1674 aa28.5■■■□□ 2.15
PLD3-207ENST00000409735 RAPGEF2Q9Y4G8 1499 aa28.49■■■□□ 2.15
PLD3-207ENST00000409735 DNMBPQ6XZF7 1577 aa28.47■■■□□ 2.15
PLD3-207ENST00000409735 KIF27Q86VH2 1401 aa28.45■■■□□ 2.15
PLD3-207ENST00000409735 TOPBP1Q92547 1522 aa28.45■■■□□ 2.14
PLD3-207ENST00000409735 FGD5Q6ZNL6 1462 aa28.44■■■□□ 2.14
PLD3-207ENST00000409735 URB2Q14146 1524 aaKnown RBP28.42■■■□□ 2.14
PLD3-207ENST00000409735 PRXQ9BXM0 1461 aa28.42■■■□□ 2.14
PLD3-207ENST00000409735 HRCP23327 699 aa28.39■■■□□ 2.13
PLD3-207ENST00000409735 ERICH3Q5RHP9 1530 aa28.38■■■□□ 2.13
PLD3-207ENST00000409735 PPARGC1BQ86YN6 1023 aaKnown RBP28.32■■■□□ 2.12
PLD3-207ENST00000409735 POLA1P09884 1462 aaPredicted RBP28.32■■■□□ 2.12
PLD3-207ENST00000409735 CUX2O14529 1486 aa28.31■■■□□ 2.12
PLD3-207ENST00000409735 CLIP1P30622 1438 aa28.29■■■□□ 2.12
PLD3-207ENST00000409735 MRC2Q9UBG0 1479 aa28.26■■■□□ 2.11
PLD3-207ENST00000409735 RAD54L2Q9Y4B4 1467 aa28.24■■■□□ 2.11
PLD3-207ENST00000409735 ERCC6Q03468 1493 aa28.22■■■□□ 2.11
PLD3-207ENST00000409735 IGF1RP08069 1367 aa28.2■■■□□ 2.11
PLD3-207ENST00000409735 ABCA10Q8WWZ4 1543 aa28.17■■■□□ 2.1
PLD3-207ENST00000409735 WDR62O43379 1518 aa28.11■■■□□ 2.09
PLD3-207ENST00000409735 VPS8Q8N3P4 1428 aa28.1■■■□□ 2.09
PLD3-207ENST00000409735 RANGAP1P46060 587 aaPredicted RBP28.07■■■□□ 2.08
PLD3-207ENST00000409735 WDR97A6NE52 1622 aa28.07■■■□□ 2.08
PLD3-207ENST00000409735 THOC2Q8NI27 1593 aaKnown RBP28.05■■■□□ 2.08
PLD3-207ENST00000409735 CARMIL1Q5VZK9 1371 aa28.05■■■□□ 2.08
PLD3-207ENST00000409735 TARBP1Q13395 1621 aaKnown RBP28.02■■■□□ 2.08
PLD3-207ENST00000409735 TTBK1Q5TCY1 1321 aaPredicted RBP27.98■■■□□ 2.07
PLD3-207ENST00000409735 TDRD9Q8NDG6 1382 aaKnown RBP27.98■■■□□ 2.07
PLD3-207ENST00000409735 ARAP1Q96P48 1450 aa27.98■■■□□ 2.07
PLD3-207ENST00000409735 ABCA5Q8WWZ7 1642 aa27.94■■■□□ 2.06
PLD3-207ENST00000409735 GAPVD1Q14C86 1478 aa27.9■■■□□ 2.06
PLD3-207ENST00000409735 IFT140Q96RY7 1462 aa27.89■■■□□ 2.06
PLD3-207ENST00000409735 CUL7Q14999 1698 aa27.88■■■□□ 2.05
PLD3-207ENST00000409735 ARHGAP35Q9NRY4 1499 aa27.88■■■□□ 2.05
PLD3-207ENST00000409735 AQRO60306 1485 aaKnown RBP eCLIP27.81■■■□□ 2.044e-8■■■■■ 31.9
PLD3-207ENST00000409735 APLP2Q06481 763 aa27.8■■■□□ 2.04
PLD3-207ENST00000409735 ZNF608Q9ULD9 1512 aaPredicted RBP27.8■■■□□ 2.04
PLD3-207ENST00000409735 PBRM1Q86U86 1689 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms