RNA–Protein interactions for RNA: ENST00000409587.5

PLD3-206, Transcript of phospholipase D family member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PLD3, Length 2,180 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-206ENST00000409587 NISCHQ9Y2I1 1504 aa38.94■■■■□ 3.82
PLD3-206ENST00000409587 CCDC180Q9P1Z9 1646 aa33.54■■■□□ 2.96
PLD3-206ENST00000409587 ZCCHC6Q5VYS8 1495 aaKnown RBP32.84■■■□□ 2.85
PLD3-206ENST00000409587 SHROOM4Q9ULL8 1493 aa32.41■■■□□ 2.78
PLD3-206ENST00000409587 DCAF1Q9Y4B6 1507 aa32.1■■■□□ 2.73
PLD3-206ENST00000409587 DCAF8L2P0C7V8 631 aa32.08■■■□□ 2.73
PLD3-206ENST00000409587 SUPT5HO00267 1087 aaKnown RBP31.49■■■□□ 2.63
PLD3-206ENST00000409587 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
PLD3-206ENST00000409587 ABCC9O60706 1549 aa31.3■■■□□ 2.6
PLD3-206ENST00000409587 NACADO15069 1562 aa31.1■■■□□ 2.57
PLD3-206ENST00000409587 SCRIBQ14160 1630 aa31.1■■■□□ 2.57
PLD3-206ENST00000409587 RB1CC1Q8TDY2 1594 aa30.68■■■□□ 2.5
PLD3-206ENST00000409587 RSF1Q96T23 1441 aaPredicted RBP30.52■■■□□ 2.48
PLD3-206ENST00000409587 CHIC1Q5VXU3 224 aa30.47■■■□□ 2.47
PLD3-206ENST00000409587 CECR2Q9BXF3 1484 aa30.32■■■□□ 2.44
PLD3-206ENST00000409587 UNC13AQ9UPW8 1703 aa30.24■■■□□ 2.43
PLD3-206ENST00000409587 MROH2BQ7Z745 1585 aa30.18■■■□□ 2.42
PLD3-206ENST00000409587 WIZO95785 1651 aa29.99■■■□□ 2.39
PLD3-206ENST00000409587 BAZ1AQ9NRL2 1556 aaPredicted RBP29.97■■■□□ 2.39
PLD3-206ENST00000409587 BICRAQ9NZM4 1560 aa29.87■■■□□ 2.37
PLD3-206ENST00000409587 SMARCA4P51532 1647 aa29.8■■■□□ 2.36
PLD3-206ENST00000409587 PABPN1Q86U42 306 aaKnown RBP eCLIP29.72■■■□□ 2.35
PLD3-206ENST00000409587 TOP2AP11388 1531 aaKnown RBP29.58■■■□□ 2.33
PLD3-206ENST00000409587 TRIM41Q8WV44 630 aa29.47■■■□□ 2.31
PLD3-206ENST00000409587 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
PLD3-206ENST00000409587 LOC105371045A0A1W2PR82 267 aa29.42■■■□□ 2.3
PLD3-206ENST00000409587 SMARCA2P51531 1590 aa29.38■■■□□ 2.29
PLD3-206ENST00000409587 CCDC88BA6NC98 1476 aa29.37■■■□□ 2.29
PLD3-206ENST00000409587 PEG3Q9GZU2 1588 aa29.36■■■□□ 2.29
PLD3-206ENST00000409587 ATAD2BQ9ULI0 1458 aa29.15■■■□□ 2.26
PLD3-206ENST00000409587 FAM9AQ8IZU1 332 aaPredicted RBP29.07■■■□□ 2.24
PLD3-206ENST00000409587 ABCC8Q09428 1581 aa29.02■■■□□ 2.24
PLD3-206ENST00000409587 BAZ1BQ9UIG0 1483 aaKnown RBP29■■■□□ 2.23
PLD3-206ENST00000409587 NCAPD3P42695 1498 aa28.75■■■□□ 2.19
PLD3-206ENST00000409587 HMGXB3Q12766 1538 aa28.73■■■□□ 2.19
PLD3-206ENST00000409587 PCGF6Q9BYE7 350 aa28.73■■■□□ 2.19
PLD3-206ENST00000409587 EHMT2Q96KQ7 1210 aa28.71■■■□□ 2.19
PLD3-206ENST00000409587 WRNQ14191 1432 aaPredicted RBP eCLIP28.66■■■□□ 2.18
PLD3-206ENST00000409587 SOGA1O94964 1423 aa28.62■■■□□ 2.17
PLD3-206ENST00000409587 SYNJ1O43426 1573 aa28.58■■■□□ 2.17
PLD3-206ENST00000409587 EEA1Q15075 1411 aa28.51■■■□□ 2.15
PLD3-206ENST00000409587 RUSC2Q8N2Y8 1516 aa28.51■■■□□ 2.15
PLD3-206ENST00000409587 TRIM26Q12899 539 aaPredicted RBP28.46■■■□□ 2.15
PLD3-206ENST00000409587 CSRNP3Q8WYN3 585 aa28.41■■■□□ 2.14
PLD3-206ENST00000409587 HRCP23327 699 aa28.4■■■□□ 2.14
PLD3-206ENST00000409587 TOP2BQ02880 1626 aa28.34■■■□□ 2.13
PLD3-206ENST00000409587 CFTRP13569 1480 aa28.32■■■□□ 2.12
PLD3-206ENST00000409587 CC2D2AQ9P2K1 1620 aa28.31■■■□□ 2.12
PLD3-206ENST00000409587 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
PLD3-206ENST00000409587 TNIKQ9UKE5 1360 aa28.27■■■□□ 2.12
PLD3-206ENST00000409587 GOLGA3Q08378 1498 aa28.21■■■□□ 2.11
PLD3-206ENST00000409587 CEP162Q5TB80 1403 aa28.21■■■□□ 2.11
PLD3-206ENST00000409587 PRDM2Q13029 1718 aa28.17■■■□□ 2.1
PLD3-206ENST00000409587 KIF21BO75037 1637 aa28.17■■■□□ 2.1
PLD3-206ENST00000409587 CUX1P39880 1505 aa28.16■■■□□ 2.1
PLD3-206ENST00000409587 CEP164Q9UPV0 1460 aa28.14■■■□□ 2.1
PLD3-206ENST00000409587 UBTFP17480 764 aaKnown RBP28.13■■■□□ 2.09
PLD3-206ENST00000409587 CADPSQ9ULU8 1353 aa28.08■■■□□ 2.09
PLD3-206ENST00000409587 PPARGC1BQ86YN6 1023 aaKnown RBP28.01■■■□□ 2.08
PLD3-206ENST00000409587 RAPGEF2Q9Y4G8 1499 aa27.98■■■□□ 2.07
PLD3-206ENST00000409587 PRXQ9BXM0 1461 aa27.87■■■□□ 2.05
PLD3-206ENST00000409587 KIF27Q86VH2 1401 aa27.85■■■□□ 2.05
PLD3-206ENST00000409587 ERICH3Q5RHP9 1530 aa27.84■■■□□ 2.05
PLD3-206ENST00000409587 CLIP1P30622 1438 aa27.82■■■□□ 2.04
PLD3-206ENST00000409587 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
PLD3-206ENST00000409587 NESP48681 1621 aa27.73■■■□□ 2.03
PLD3-206ENST00000409587 FGD5Q6ZNL6 1462 aa27.73■■■□□ 2.03
PLD3-206ENST00000409587 CUX2O14529 1486 aa27.68■■■□□ 2.02
PLD3-206ENST00000409587 VPS8Q8N3P4 1428 aa27.66■■■□□ 2.02
PLD3-206ENST00000409587 TTBK1Q5TCY1 1321 aaPredicted RBP27.64■■■□□ 2.02
PLD3-206ENST00000409587 DNMBPQ6XZF7 1577 aa27.62■■■□□ 2.01
PLD3-206ENST00000409587 LAMC3Q9Y6N6 1575 aa27.62■■■□□ 2.01
PLD3-206ENST00000409587 IGF1RP08069 1367 aa27.6■■■□□ 2.01
PLD3-206ENST00000409587 DNAJC5BQ9UF47 199 aa27.59■■■□□ 2.01
PLD3-206ENST00000409587 RANGAP1P46060 587 aaPredicted RBP27.58■■■□□ 2.01
PLD3-206ENST00000409587 ZEB1P37275 1124 aaPredicted RBP27.58■■■□□ 2
PLD3-206ENST00000409587 TOPBP1Q92547 1522 aa27.57■■■□□ 2
PLD3-206ENST00000409587 POLA1P09884 1462 aaPredicted RBP27.5■■□□□ 1.99
PLD3-206ENST00000409587 ARAP1Q96P48 1450 aa27.5■■□□□ 1.99
PLD3-206ENST00000409587 RAD54L2Q9Y4B4 1467 aa27.47■■□□□ 1.99
PLD3-206ENST00000409587 ABCA10Q8WWZ4 1543 aa27.46■■□□□ 1.99
PLD3-206ENST00000409587 CARMIL1Q5VZK9 1371 aa27.45■■□□□ 1.98
PLD3-206ENST00000409587 URB2Q14146 1524 aaKnown RBP27.44■■□□□ 1.98
PLD3-206ENST00000409587 PDS5BQ9NTI5 1447 aa27.4■■□□□ 1.98
PLD3-206ENST00000409587 ARHGAP35Q9NRY4 1499 aa27.37■■□□□ 1.97
PLD3-206ENST00000409587 APLP2Q06481 763 aa27.36■■□□□ 1.97
PLD3-206ENST00000409587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.35■■□□□ 1.97
PLD3-206ENST00000409587 KIF21AQ7Z4S6 1674 aa27.35■■□□□ 1.97
PLD3-206ENST00000409587 WDR97A6NE52 1622 aa27.32■■□□□ 1.96
PLD3-206ENST00000409587 CCER1Q8TC90 406 aaPredicted RBP27.25■■□□□ 1.95
PLD3-206ENST00000409587 CUL7Q14999 1698 aa27.23■■□□□ 1.95
PLD3-206ENST00000409587 ABCA5Q8WWZ7 1642 aa27.19■■□□□ 1.94
PLD3-206ENST00000409587 KANK4Q5T7N3 995 aaPredicted RBP27.16■■□□□ 1.94
PLD3-206ENST00000409587 TDRD9Q8NDG6 1382 aaKnown RBP27.15■■□□□ 1.94
PLD3-206ENST00000409587 TARBP1Q13395 1621 aaKnown RBP27.11■■□□□ 1.93
PLD3-206ENST00000409587 GAPVD1Q14C86 1478 aa27.1■■□□□ 1.93
PLD3-206ENST00000409587 HNRNPUL2Q1KMD3 747 aaKnown RBP27.08■■□□□ 1.93
PLD3-206ENST00000409587 CTTNBP2Q8WZ74 1663 aa27.07■■□□□ 1.92
PLD3-206ENST00000409587 MRC2Q9UBG0 1479 aa27.03■■□□□ 1.92
PLD3-206ENST00000409587 MAP3K1Q13233 1512 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms