RNA–Protein interactions for RNA: ENST00000406629.1

MTMR3-205, Transcript of myotubularin related protein 3, humanhuman

TSL 5 BASIC

Gene MTMR3, Length 3,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR3-205ENST00000406629 DCAF8L2P0C7V8 631 aa15.55■□□□□ 0.08
MTMR3-205ENST00000406629 NISCHQ9Y2I1 1504 aa15.31■□□□□ 0.04
MTMR3-205ENST00000406629 SHROOM4Q9ULL8 1493 aa14.71□□□□□ -0.05
MTMR3-205ENST00000406629 SUPT5HO00267 1087 aaKnown RBP14.63□□□□□ -0.07
MTMR3-205ENST00000406629 EHMT2Q96KQ7 1210 aa14.26□□□□□ -0.13
MTMR3-205ENST00000406629 PCGF6Q9BYE7 350 aa13.88□□□□□ -0.19
MTMR3-205ENST00000406629 FAM9AQ8IZU1 332 aaPredicted RBP13.83□□□□□ -0.2
MTMR3-205ENST00000406629 PPARGC1BQ86YN6 1023 aaKnown RBP13.71□□□□□ -0.21
MTMR3-205ENST00000406629 TTBK1Q5TCY1 1321 aaPredicted RBP13.65□□□□□ -0.22
MTMR3-205ENST00000406629 HRCP23327 699 aa13.63□□□□□ -0.23
MTMR3-205ENST00000406629 RANGAP1P46060 587 aaPredicted RBP13.58□□□□□ -0.24
MTMR3-205ENST00000406629 CHIC1Q5VXU3 224 aa13.52□□□□□ -0.24
MTMR3-205ENST00000406629 LOC105371045A0A1W2PR82 267 aa13.51□□□□□ -0.25
MTMR3-205ENST00000406629 ABCC9O60706 1549 aa13.46□□□□□ -0.26
MTMR3-205ENST00000406629 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
MTMR3-205ENST00000406629 TRIM41Q8WV44 630 aa13.36□□□□□ -0.27
MTMR3-205ENST00000406629 MYO15BQ96JP2 1530 aa13.29□□□□□ -0.28
MTMR3-205ENST00000406629 ATP1B4Q9UN42 357 aaPredicted RBP13.18□□□□□ -0.3
MTMR3-205ENST00000406629 UBTFP17480 764 aaKnown RBP13.15□□□□□ -0.3
MTMR3-205ENST00000406629 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.3
MTMR3-205ENST00000406629 APLP2Q06481 763 aa13.12□□□□□ -0.31
MTMR3-205ENST00000406629 CCER1Q8TC90 406 aaPredicted RBP12.95□□□□□ -0.34
MTMR3-205ENST00000406629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.93□□□□□ -0.34
MTMR3-205ENST00000406629 ZEB1P37275 1124 aaPredicted RBP12.92□□□□□ -0.34
MTMR3-205ENST00000406629 SCAF1Q9H7N4 1312 aaKnown RBP12.87□□□□□ -0.35
MTMR3-205ENST00000406629 YTHDC1Q96MU7 727 aaKnown RBP12.86□□□□□ -0.35
MTMR3-205ENST00000406629 ZCCHC6Q5VYS8 1495 aaKnown RBP12.84□□□□□ -0.35
MTMR3-205ENST00000406629 ITGAEP38570 1179 aa12.83□□□□□ -0.35
MTMR3-205ENST00000406629 PELP1Q8IZL8 1130 aaKnown RBP12.81□□□□□ -0.36
MTMR3-205ENST00000406629 DCAF1Q9Y4B6 1507 aa12.76□□□□□ -0.37
MTMR3-205ENST00000406629 SCRIBQ14160 1630 aa12.74□□□□□ -0.37
MTMR3-205ENST00000406629 HNRNPUL2Q1KMD3 747 aaKnown RBP12.72□□□□□ -0.37
MTMR3-205ENST00000406629 GTF3C3Q9Y5Q9 886 aa12.72□□□□□ -0.37
MTMR3-205ENST00000406629 CENPBP07199 599 aaPredicted RBP12.7□□□□□ -0.38
MTMR3-205ENST00000406629 NEUROD1Q13562 356 aa12.68□□□□□ -0.38
MTMR3-205ENST00000406629 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
MTMR3-205ENST00000406629 ACIN1Q9UKV3 1341 aaKnown RBP12.62□□□□□ -0.39
MTMR3-205ENST00000406629 ARID3CA6NKF2 412 aa12.6□□□□□ -0.39
MTMR3-205ENST00000406629 FBLN2P98095 1184 aa12.59□□□□□ -0.39
MTMR3-205ENST00000406629 P3H3Q8IVL6 736 aa12.56□□□□□ -0.4
MTMR3-205ENST00000406629 CNGB1Q14028 1251 aaPredicted RBP12.52□□□□□ -0.41
MTMR3-205ENST00000406629 MYT1LQ9UL68 1186 aa12.51□□□□□ -0.41
MTMR3-205ENST00000406629 CCDC180Q9P1Z9 1646 aa12.45□□□□□ -0.42
MTMR3-205ENST00000406629 RSF1Q96T23 1441 aaPredicted RBP12.41□□□□□ -0.42
MTMR3-205ENST00000406629 FAM50AQ14320 339 aaKnown RBP12.4□□□□□ -0.42
MTMR3-205ENST00000406629 POLR3GLQ9BT43 218 aa12.4□□□□□ -0.42
MTMR3-205ENST00000406629 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
MTMR3-205ENST00000406629 ZNF316A6NFI3 1004 aaPredicted RBP12.36□□□□□ -0.43
MTMR3-205ENST00000406629 MIER1Q8N108 512 aa12.34□□□□□ -0.43
MTMR3-205ENST00000406629 CECR2Q9BXF3 1484 aa12.32□□□□□ -0.44
MTMR3-205ENST00000406629 RB1CC1Q8TDY2 1594 aa12.25□□□□□ -0.45
MTMR3-205ENST00000406629 BCANQ96GW7 911 aa12.24□□□□□ -0.45
MTMR3-205ENST00000406629 TRIM52Q96A61 297 aa12.21□□□□□ -0.45
MTMR3-205ENST00000406629 MYT1Q01538 1121 aa12.2□□□□□ -0.46
MTMR3-205ENST00000406629 ZNF777Q9ULD5 760 aaPredicted RBP12.18□□□□□ -0.46
MTMR3-205ENST00000406629 ZNF326Q5BKZ1 582 aaKnown RBP12.17□□□□□ -0.46
MTMR3-205ENST00000406629 CEP162Q5TB80 1403 aa12.11□□□□□ -0.47
MTMR3-205ENST00000406629 NACADO15069 1562 aa12.09□□□□□ -0.47
MTMR3-205ENST00000406629 SOGA1O94964 1423 aa12.08□□□□□ -0.48
MTMR3-205ENST00000406629 SLC4A1APQ9BWU0 796 aaKnown RBP12.07□□□□□ -0.48
MTMR3-205ENST00000406629 PLPPR3Q6T4P5 718 aa12.06□□□□□ -0.48
MTMR3-205ENST00000406629 CHIC2Q9UKJ5 165 aa12.06□□□□□ -0.48
MTMR3-205ENST00000406629 MROH2BQ7Z745 1585 aa12.05□□□□□ -0.48
MTMR3-205ENST00000406629 BAZ1BQ9UIG0 1483 aaKnown RBP12.04□□□□□ -0.48
MTMR3-205ENST00000406629 SENP3Q9H4L4 574 aaPredicted RBP12.03□□□□□ -0.48
MTMR3-205ENST00000406629 CCDC88BA6NC98 1476 aa12.03□□□□□ -0.48
MTMR3-205ENST00000406629 ABCC8Q09428 1581 aa12.02□□□□□ -0.48
MTMR3-205ENST00000406629 HIRIP3Q9BW71 556 aaPredicted RBP12.02□□□□□ -0.49
MTMR3-205ENST00000406629 CHMP7Q8WUX9 453 aaPredicted RBP12□□□□□ -0.49
MTMR3-205ENST00000406629 NEFLP07196 543 aa11.97□□□□□ -0.49
MTMR3-205ENST00000406629 WRNQ14191 1432 aaPredicted RBP eCLIP11.97□□□□□ -0.49
MTMR3-205ENST00000406629 SUPT16HQ9Y5B9 1047 aaKnown RBP11.96□□□□□ -0.49
MTMR3-205ENST00000406629 RUSC2Q8N2Y8 1516 aa11.96□□□□□ -0.49
MTMR3-205ENST00000406629 FKBP8Q14318 412 aa11.96□□□□□ -0.5
MTMR3-205ENST00000406629 DDX10Q13206 875 aaKnown RBP11.95□□□□□ -0.5
MTMR3-205ENST00000406629 KCNH8Q96L42 1107 aa11.95□□□□□ -0.5
MTMR3-205ENST00000406629 WIZO95785 1651 aa11.94□□□□□ -0.5
MTMR3-205ENST00000406629 TNIKQ9UKE5 1360 aa11.93□□□□□ -0.5
MTMR3-205ENST00000406629 BAZ1AQ9NRL2 1556 aaPredicted RBP11.9□□□□□ -0.5
MTMR3-205ENST00000406629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.54e-6■■□□□ 11.5
MTMR3-205ENST00000406629 CLIP1P30622 1438 aa11.89□□□□□ -0.51
MTMR3-205ENST00000406629 ERICH6Q7L0X2 663 aa11.88□□□□□ -0.51
MTMR3-205ENST00000406629 RRP7BPQ9NSQ0 103 aa11.86□□□□□ -0.51
MTMR3-205ENST00000406629 IRX6P78412 446 aaPredicted RBP11.85□□□□□ -0.51
MTMR3-205ENST00000406629 CHGAP10645 457 aaKnown RBP11.85□□□□□ -0.51
MTMR3-205ENST00000406629 KANK4Q5T7N3 995 aaPredicted RBP11.84□□□□□ -0.51
MTMR3-205ENST00000406629 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
MTMR3-205ENST00000406629 TDRD9Q8NDG6 1382 aaKnown RBP11.83□□□□□ -0.52
MTMR3-205ENST00000406629 CDK11AQ9UQ88 783 aaPredicted RBP11.82□□□□□ -0.52
MTMR3-205ENST00000406629 MTUS2Q5JR59 1369 aa11.82□□□□□ -0.52
MTMR3-205ENST00000406629 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
MTMR3-205ENST00000406629 GOLGA3Q08378 1498 aa11.81□□□□□ -0.52
MTMR3-205ENST00000406629 SIN3AQ96ST3 1273 aa11.81□□□□□ -0.52
MTMR3-205ENST00000406629 SENP3-EIF4A1A0A087X0R7 540 aa11.79□□□□□ -0.52
MTMR3-205ENST00000406629 NPM1P06748 294 aaKnown RBP eCLIP11.78□□□□□ -0.52
MTMR3-205ENST00000406629 ANP32EQ9BTT0 268 aa11.78□□□□□ -0.52
MTMR3-205ENST00000406629 KDM2AQ9Y2K7 1162 aa11.78□□□□□ -0.52
MTMR3-205ENST00000406629 CUX2O14529 1486 aa11.77□□□□□ -0.53
MTMR3-205ENST00000406629 KIF27Q86VH2 1401 aa11.76□□□□□ -0.53
MTMR3-205ENST00000406629 ANP32CO43423 234 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms