RNA–Protein interactions for RNA: ENST00000405853.7

NR1H3-203, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-203ENST00000405853 NISCHQ9Y2I1 1504 aa34.21■■■■□ 3.07
NR1H3-203ENST00000405853 CCDC180Q9P1Z9 1646 aa30.01■■■□□ 2.39
NR1H3-203ENST00000405853 ZCCHC6Q5VYS8 1495 aaKnown RBP28.77■■■□□ 2.2
NR1H3-203ENST00000405853 DCAF1Q9Y4B6 1507 aa28.47■■■□□ 2.15
NR1H3-203ENST00000405853 MYO15BQ96JP2 1530 aa28.16■■■□□ 2.1
NR1H3-203ENST00000405853 ABCC9O60706 1549 aa27.94■■■□□ 2.06
NR1H3-203ENST00000405853 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
NR1H3-203ENST00000405853 NACADO15069 1562 aa27.86■■■□□ 2.05
NR1H3-203ENST00000405853 RB1CC1Q8TDY2 1594 aa27.58■■■□□ 2.01
NR1H3-203ENST00000405853 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
NR1H3-203ENST00000405853 SCRIBQ14160 1630 aa27.3■■□□□ 1.96
NR1H3-203ENST00000405853 UNC13AQ9UPW8 1703 aa27.01■■□□□ 1.91
NR1H3-203ENST00000405853 BICRAQ9NZM4 1560 aa26.65■■□□□ 1.86
NR1H3-203ENST00000405853 SUPT5HO00267 1087 aaKnown RBP26.6■■□□□ 1.85
NR1H3-203ENST00000405853 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
NR1H3-203ENST00000405853 BAZ1AQ9NRL2 1556 aaPredicted RBP26.47■■□□□ 1.83
NR1H3-203ENST00000405853 CECR2Q9BXF3 1484 aa26.41■■□□□ 1.82
NR1H3-203ENST00000405853 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.81
NR1H3-203ENST00000405853 SMARCA4P51532 1647 aa26.31■■□□□ 1.8
NR1H3-203ENST00000405853 PABPN1Q86U42 306 aaKnown RBP eCLIP26.23■■□□□ 1.79
NR1H3-203ENST00000405853 WIZO95785 1651 aa26.14■■□□□ 1.77
NR1H3-203ENST00000405853 PEG3Q9GZU2 1588 aa26.09■■□□□ 1.77
NR1H3-203ENST00000405853 TOP2AP11388 1531 aaKnown RBP25.97■■□□□ 1.75
NR1H3-203ENST00000405853 SMARCA2P51531 1590 aa25.91■■□□□ 1.74
NR1H3-203ENST00000405853 EIF4G1Q04637 1599 aaKnown RBP25.85■■□□□ 1.73
NR1H3-203ENST00000405853 ATAD2BQ9ULI0 1458 aa25.8■■□□□ 1.72
NR1H3-203ENST00000405853 HMGXB3Q12766 1538 aa25.68■■□□□ 1.7
NR1H3-203ENST00000405853 BAZ1BQ9UIG0 1483 aaKnown RBP25.67■■□□□ 1.7
NR1H3-203ENST00000405853 NCAPD3P42695 1498 aa25.64■■□□□ 1.7
NR1H3-203ENST00000405853 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
NR1H3-203ENST00000405853 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
NR1H3-203ENST00000405853 CC2D2AQ9P2K1 1620 aa25.43■■□□□ 1.66
NR1H3-203ENST00000405853 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
NR1H3-203ENST00000405853 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
NR1H3-203ENST00000405853 CFTRP13569 1480 aa25.06■■□□□ 1.6
NR1H3-203ENST00000405853 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
NR1H3-203ENST00000405853 WRNQ14191 1432 aaPredicted RBP eCLIP24.95■■□□□ 1.58
NR1H3-203ENST00000405853 CADPSQ9ULU8 1353 aa24.93■■□□□ 1.58
NR1H3-203ENST00000405853 BIVM-ERCC5R4GMW8 1640 aa24.85■■□□□ 1.57
NR1H3-203ENST00000405853 TOP2BQ02880 1626 aa24.83■■□□□ 1.57
NR1H3-203ENST00000405853 LAMC3Q9Y6N6 1575 aa24.82■■□□□ 1.56
NR1H3-203ENST00000405853 SYNJ1O43426 1573 aa24.81■■□□□ 1.56
NR1H3-203ENST00000405853 EEA1Q15075 1411 aa24.78■■□□□ 1.56
NR1H3-203ENST00000405853 CUX1P39880 1505 aa24.64■■□□□ 1.53
NR1H3-203ENST00000405853 FANCD2Q9BXW9 1451 aa24.63■■□□□ 1.53
NR1H3-203ENST00000405853 PDS5BQ9NTI5 1447 aa24.56■■□□□ 1.52
NR1H3-203ENST00000405853 NESP48681 1621 aa24.54■■□□□ 1.52
NR1H3-203ENST00000405853 SOGA1O94964 1423 aa24.53■■□□□ 1.52
NR1H3-203ENST00000405853 DNMBPQ6XZF7 1577 aa24.51■■□□□ 1.51
NR1H3-203ENST00000405853 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
NR1H3-203ENST00000405853 FAM9AQ8IZU1 332 aaPredicted RBP24.48■■□□□ 1.51
NR1H3-203ENST00000405853 LOC105371045A0A1W2PR82 267 aa24.47■■□□□ 1.51
NR1H3-203ENST00000405853 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
NR1H3-203ENST00000405853 CSRNP3Q8WYN3 585 aa24.44■■□□□ 1.5
NR1H3-203ENST00000405853 KIF21BO75037 1637 aa24.42■■□□□ 1.5
NR1H3-203ENST00000405853 KIF21AQ7Z4S6 1674 aa24.41■■□□□ 1.5
NR1H3-203ENST00000405853 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
NR1H3-203ENST00000405853 TOPBP1Q92547 1522 aa24.39■■□□□ 1.5
NR1H3-203ENST00000405853 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
NR1H3-203ENST00000405853 KIF27Q86VH2 1401 aa24.35■■□□□ 1.49
NR1H3-203ENST00000405853 GOLGA3Q08378 1498 aa24.33■■□□□ 1.49
NR1H3-203ENST00000405853 URB2Q14146 1524 aaKnown RBP24.29■■□□□ 1.48
NR1H3-203ENST00000405853 ERICH3Q5RHP9 1530 aa24.27■■□□□ 1.48
NR1H3-203ENST00000405853 TNIKQ9UKE5 1360 aa24.25■■□□□ 1.47
NR1H3-203ENST00000405853 POLA1P09884 1462 aaPredicted RBP24.25■■□□□ 1.47
NR1H3-203ENST00000405853 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
NR1H3-203ENST00000405853 WDR97A6NE52 1622 aa24.22■■□□□ 1.47
NR1H3-203ENST00000405853 MRC2Q9UBG0 1479 aa24.22■■□□□ 1.47
NR1H3-203ENST00000405853 PRXQ9BXM0 1461 aa24.2■■□□□ 1.46
NR1H3-203ENST00000405853 CUX2O14529 1486 aa24.19■■□□□ 1.46
NR1H3-203ENST00000405853 WDR62O43379 1518 aa24.13■■□□□ 1.45
NR1H3-203ENST00000405853 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
NR1H3-203ENST00000405853 TARBP1Q13395 1621 aaKnown RBP24.07■■□□□ 1.44
NR1H3-203ENST00000405853 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
NR1H3-203ENST00000405853 CUL7Q14999 1698 aa24.06■■□□□ 1.44
NR1H3-203ENST00000405853 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
NR1H3-203ENST00000405853 IGF1RP08069 1367 aa24.05■■□□□ 1.44
NR1H3-203ENST00000405853 CEP162Q5TB80 1403 aa24.05■■□□□ 1.44
NR1H3-203ENST00000405853 UBTFP17480 764 aaKnown RBP24.04■■□□□ 1.44
NR1H3-203ENST00000405853 ERCC6Q03468 1493 aa24.03■■□□□ 1.44
NR1H3-203ENST00000405853 THOC2Q8NI27 1593 aaKnown RBP24.02■■□□□ 1.44
NR1H3-203ENST00000405853 EHMT2Q96KQ7 1210 aa23.97■■□□□ 1.43
NR1H3-203ENST00000405853 IFT140Q96RY7 1462 aa23.96■■□□□ 1.43
NR1H3-203ENST00000405853 CARMIL1Q5VZK9 1371 aa23.95■■□□□ 1.42
NR1H3-203ENST00000405853 GAPVD1Q14C86 1478 aa23.93■■□□□ 1.42
NR1H3-203ENST00000405853 PBRM1Q86U86 1689 aa23.88■■□□□ 1.41
NR1H3-203ENST00000405853 CLIP1P30622 1438 aa23.87■■□□□ 1.41
NR1H3-203ENST00000405853 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
NR1H3-203ENST00000405853 CTTNBP2Q8WZ74 1663 aa23.79■■□□□ 1.4
NR1H3-203ENST00000405853 GRIN2BQ13224 1484 aa23.77■■□□□ 1.4
NR1H3-203ENST00000405853 ADAMTS12P58397 1594 aa23.71■■□□□ 1.39
NR1H3-203ENST00000405853 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
NR1H3-203ENST00000405853 VPS8Q8N3P4 1428 aa23.71■■□□□ 1.39
NR1H3-203ENST00000405853 EIF4G3O43432 1585 aaKnown RBP23.71■■□□□ 1.39
NR1H3-203ENST00000405853 AQRO60306 1485 aaKnown RBP eCLIP23.67■■□□□ 1.389e-8■■■■□ 21.2
NR1H3-203ENST00000405853 EFCAB5A4FU69 1503 aa23.65■■□□□ 1.38
NR1H3-203ENST00000405853 ZNF608Q9ULD9 1512 aaPredicted RBP23.65■■□□□ 1.38
NR1H3-203ENST00000405853 TRIM26Q12899 539 aaPredicted RBP23.63■■□□□ 1.37
NR1H3-203ENST00000405853 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
NR1H3-203ENST00000405853 ARHGAP35Q9NRY4 1499 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 248.7 ms