RNA–Protein interactions for RNA: ENST00000405159.7

FAM104A-202, Transcript of family with sequence similarity 104 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM104A, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM104A-202ENST00000405159 NISCHQ9Y2I1 1504 aa33.39■■■□□ 2.94
FAM104A-202ENST00000405159 CCDC180Q9P1Z9 1646 aa28.53■■■□□ 2.16
FAM104A-202ENST00000405159 SHROOM4Q9ULL8 1493 aa28.39■■■□□ 2.13
FAM104A-202ENST00000405159 ZCCHC6Q5VYS8 1495 aaKnown RBP28.14■■■□□ 2.1
FAM104A-202ENST00000405159 DCAF8L2P0C7V8 631 aa28.1■■■□□ 2.09
FAM104A-202ENST00000405159 SUPT5HO00267 1087 aaKnown RBP27.95■■■□□ 2.07
FAM104A-202ENST00000405159 DCAF1Q9Y4B6 1507 aa27.3■■□□□ 1.96
FAM104A-202ENST00000405159 MYO15BQ96JP2 1530 aa27.2■■□□□ 1.94
FAM104A-202ENST00000405159 HRCP23327 699 aa27.15■■□□□ 1.94
FAM104A-202ENST00000405159 PCGF6Q9BYE7 350 aa27.09■■□□□ 1.93
FAM104A-202ENST00000405159 CHIC1Q5VXU3 224 aa27.07■■□□□ 1.92
FAM104A-202ENST00000405159 ABCC9O60706 1549 aa26.97■■□□□ 1.91
FAM104A-202ENST00000405159 PPARGC1BQ86YN6 1023 aaKnown RBP26.95■■□□□ 1.9
FAM104A-202ENST00000405159 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
FAM104A-202ENST00000405159 LOC105371045A0A1W2PR82 267 aa26.61■■□□□ 1.85
FAM104A-202ENST00000405159 NACADO15069 1562 aa26.5■■□□□ 1.83
FAM104A-202ENST00000405159 RSF1Q96T23 1441 aaPredicted RBP26.28■■□□□ 1.8
FAM104A-202ENST00000405159 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.79
FAM104A-202ENST00000405159 CECR2Q9BXF3 1484 aa26.14■■□□□ 1.77
FAM104A-202ENST00000405159 TRIM26Q12899 539 aaPredicted RBP26.09■■□□□ 1.77
FAM104A-202ENST00000405159 EHMT2Q96KQ7 1210 aa26.05■■□□□ 1.76
FAM104A-202ENST00000405159 MROH2BQ7Z745 1585 aa25.98■■□□□ 1.75
FAM104A-202ENST00000405159 FAM9AQ8IZU1 332 aaPredicted RBP25.95■■□□□ 1.75
FAM104A-202ENST00000405159 WIZO95785 1651 aa25.84■■□□□ 1.73
FAM104A-202ENST00000405159 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
FAM104A-202ENST00000405159 PABPN1Q86U42 306 aaKnown RBP eCLIP25.76■■□□□ 1.71
FAM104A-202ENST00000405159 TRIM41Q8WV44 630 aa25.74■■□□□ 1.71
FAM104A-202ENST00000405159 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
FAM104A-202ENST00000405159 ZEB1P37275 1124 aaPredicted RBP25.57■■□□□ 1.68
FAM104A-202ENST00000405159 SCAF1Q9H7N4 1312 aaKnown RBP25.54■■□□□ 1.68
FAM104A-202ENST00000405159 SMARCA4P51532 1647 aa25.53■■□□□ 1.68
FAM104A-202ENST00000405159 BICRAQ9NZM4 1560 aa25.48■■□□□ 1.67
FAM104A-202ENST00000405159 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
FAM104A-202ENST00000405159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.3■■□□□ 1.64
FAM104A-202ENST00000405159 TTBK1Q5TCY1 1321 aaPredicted RBP25.29■■□□□ 1.64
FAM104A-202ENST00000405159 CCDC88BA6NC98 1476 aa25.29■■□□□ 1.64
FAM104A-202ENST00000405159 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
FAM104A-202ENST00000405159 PELP1Q8IZL8 1130 aaKnown RBP25.2■■□□□ 1.63
FAM104A-202ENST00000405159 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
FAM104A-202ENST00000405159 CCER1Q8TC90 406 aaPredicted RBP25.17■■□□□ 1.62
FAM104A-202ENST00000405159 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
FAM104A-202ENST00000405159 NEUROD1Q13562 356 aa25.04■■□□□ 1.6
FAM104A-202ENST00000405159 ATAD2BQ9ULI0 1458 aa24.98■■□□□ 1.59
FAM104A-202ENST00000405159 PEG3Q9GZU2 1588 aa24.98■■□□□ 1.59
FAM104A-202ENST00000405159 ACIN1Q9UKV3 1341 aaKnown RBP24.97■■□□□ 1.59
FAM104A-202ENST00000405159 BAZ1BQ9UIG0 1483 aaKnown RBP24.94■■□□□ 1.58
FAM104A-202ENST00000405159 DIEXFQ68CQ4 756 aaKnown RBP24.89■■□□□ 1.57
FAM104A-202ENST00000405159 GTF3C3Q9Y5Q9 886 aa24.87■■□□□ 1.57
FAM104A-202ENST00000405159 SOGA1O94964 1423 aa24.82■■□□□ 1.56
FAM104A-202ENST00000405159 WRNQ14191 1432 aaPredicted RBP eCLIP24.75■■□□□ 1.55
FAM104A-202ENST00000405159 YTHDC1Q96MU7 727 aaKnown RBP24.73■■□□□ 1.55
FAM104A-202ENST00000405159 RUSC2Q8N2Y8 1516 aa24.72■■□□□ 1.55
FAM104A-202ENST00000405159 CENPBP07199 599 aaPredicted RBP24.71■■□□□ 1.55
FAM104A-202ENST00000405159 CSRNP3Q8WYN3 585 aa24.64■■□□□ 1.53
FAM104A-202ENST00000405159 SYNJ1O43426 1573 aa24.62■■□□□ 1.53
FAM104A-202ENST00000405159 UBTFP17480 764 aaKnown RBP24.61■■□□□ 1.53
FAM104A-202ENST00000405159 CEP162Q5TB80 1403 aa24.55■■□□□ 1.52
FAM104A-202ENST00000405159 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
FAM104A-202ENST00000405159 EEA1Q15075 1411 aa24.51■■□□□ 1.51
FAM104A-202ENST00000405159 HMGXB3Q12766 1538 aa24.49■■□□□ 1.51
FAM104A-202ENST00000405159 HNRNPUL2Q1KMD3 747 aaKnown RBP24.45■■□□□ 1.51
FAM104A-202ENST00000405159 ZNF316A6NFI3 1004 aaPredicted RBP24.44■■□□□ 1.5
FAM104A-202ENST00000405159 TNIKQ9UKE5 1360 aa24.42■■□□□ 1.5
FAM104A-202ENST00000405159 GOLGA3Q08378 1498 aa24.39■■□□□ 1.5
FAM104A-202ENST00000405159 RANGAP1P46060 587 aaPredicted RBP24.37■■□□□ 1.49
FAM104A-202ENST00000405159 MIER1Q8N108 512 aa24.34■■□□□ 1.49
FAM104A-202ENST00000405159 TOP2BQ02880 1626 aa24.31■■□□□ 1.48
FAM104A-202ENST00000405159 CEP164Q9UPV0 1460 aa24.29■■□□□ 1.48
FAM104A-202ENST00000405159 CFTRP13569 1480 aa24.24■■□□□ 1.47
FAM104A-202ENST00000405159 RAPGEF2Q9Y4G8 1499 aa24.22■■□□□ 1.47
FAM104A-202ENST00000405159 CC2D2AQ9P2K1 1620 aa24.22■■□□□ 1.47
FAM104A-202ENST00000405159 KIF21BO75037 1637 aa24.2■■□□□ 1.47
FAM104A-202ENST00000405159 CUX1P39880 1505 aa24.2■■□□□ 1.46
FAM104A-202ENST00000405159 BIVM-ERCC5R4GMW8 1640 aa24.2■■□□□ 1.46
FAM104A-202ENST00000405159 CLIP1P30622 1438 aa24.14■■□□□ 1.46
FAM104A-202ENST00000405159 CADPSQ9ULU8 1353 aa24.09■■□□□ 1.45
FAM104A-202ENST00000405159 APLP2Q06481 763 aa24.02■■□□□ 1.44
FAM104A-202ENST00000405159 KIF27Q86VH2 1401 aa24.01■■□□□ 1.43
FAM104A-202ENST00000405159 PRDM2Q13029 1718 aa23.99■■□□□ 1.43
FAM104A-202ENST00000405159 PRXQ9BXM0 1461 aa23.96■■□□□ 1.43
FAM104A-202ENST00000405159 MYT1Q01538 1121 aa23.95■■□□□ 1.42
FAM104A-202ENST00000405159 VPS8Q8N3P4 1428 aa23.93■■□□□ 1.42
FAM104A-202ENST00000405159 CUX2O14529 1486 aa23.91■■□□□ 1.42
FAM104A-202ENST00000405159 NESP48681 1621 aa23.89■■□□□ 1.42
FAM104A-202ENST00000405159 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
FAM104A-202ENST00000405159 FANCD2Q9BXW9 1451 aa23.88■■□□□ 1.41
FAM104A-202ENST00000405159 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
FAM104A-202ENST00000405159 DNAJC5BQ9UF47 199 aa23.82■■□□□ 1.4
FAM104A-202ENST00000405159 IGF1RP08069 1367 aa23.77■■□□□ 1.4
FAM104A-202ENST00000405159 ARAP1Q96P48 1450 aa23.74■■□□□ 1.39
FAM104A-202ENST00000405159 ITGAEP38570 1179 aa23.74■■□□□ 1.39
FAM104A-202ENST00000405159 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
FAM104A-202ENST00000405159 SUPT16HQ9Y5B9 1047 aaKnown RBP23.71■■□□□ 1.39
FAM104A-202ENST00000405159 CARMIL1Q5VZK9 1371 aa23.7■■□□□ 1.38
FAM104A-202ENST00000405159 KANK4Q5T7N3 995 aaPredicted RBP23.67■■□□□ 1.38
FAM104A-202ENST00000405159 TOPBP1Q92547 1522 aa23.66■■□□□ 1.38
FAM104A-202ENST00000405159 DHX57Q6P158 1386 aaKnown RBP23.65■■□□□ 1.38
FAM104A-202ENST00000405159 DNMBPQ6XZF7 1577 aa23.64■■□□□ 1.38
FAM104A-202ENST00000405159 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
FAM104A-202ENST00000405159 ARHGAP35Q9NRY4 1499 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms