RNA–Protein interactions for RNA: ENST00000404857.6

KCNMA1-211, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-211ENST00000404857 NISCHQ9Y2I1 1504 aa18.84■□□□□ 0.61
KCNMA1-211ENST00000404857 CCDC180Q9P1Z9 1646 aa16.98■□□□□ 0.31
KCNMA1-211ENST00000404857 DCAF1Q9Y4B6 1507 aa16.05■□□□□ 0.16
KCNMA1-211ENST00000404857 MYO15BQ96JP2 1530 aa15.99■□□□□ 0.15
KCNMA1-211ENST00000404857 ZCCHC6Q5VYS8 1495 aaKnown RBP15.92■□□□□ 0.14
KCNMA1-211ENST00000404857 NACADO15069 1562 aa15.59■□□□□ 0.09
KCNMA1-211ENST00000404857 RB1CC1Q8TDY2 1594 aa15.36■□□□□ 0.05
KCNMA1-211ENST00000404857 UNC13AQ9UPW8 1703 aa15.24■□□□□ 0.03
KCNMA1-211ENST00000404857 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
KCNMA1-211ENST00000404857 ABCC9O60706 1549 aa15.12■□□□□ 0.01
KCNMA1-211ENST00000404857 BICRAQ9NZM4 1560 aa14.95□□□□□ -0.02
KCNMA1-211ENST00000404857 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
KCNMA1-211ENST00000404857 PEG3Q9GZU2 1588 aa14.74□□□□□ -0.05
KCNMA1-211ENST00000404857 BAZ1AQ9NRL2 1556 aaPredicted RBP14.6□□□□□ -0.07
KCNMA1-211ENST00000404857 SMARCA4P51532 1647 aa14.58□□□□□ -0.08
KCNMA1-211ENST00000404857 SMARCA2P51531 1590 aa14.49□□□□□ -0.09
KCNMA1-211ENST00000404857 HMGXB3Q12766 1538 aa14.41□□□□□ -0.1
KCNMA1-211ENST00000404857 RSF1Q96T23 1441 aaPredicted RBP14.37□□□□□ -0.11
KCNMA1-211ENST00000404857 MROH2BQ7Z745 1585 aa14.37□□□□□ -0.11
KCNMA1-211ENST00000404857 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
KCNMA1-211ENST00000404857 EIF4G1Q04637 1599 aaKnown RBP14.35□□□□□ -0.11
KCNMA1-211ENST00000404857 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
KCNMA1-211ENST00000404857 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
KCNMA1-211ENST00000404857 WIZO95785 1651 aa14.28□□□□□ -0.12
KCNMA1-211ENST00000404857 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
KCNMA1-211ENST00000404857 DCAF8L2P0C7V8 631 aa14.22□□□□□ -0.13
KCNMA1-211ENST00000404857 ATAD2BQ9ULI0 1458 aa14.2□□□□□ -0.14
KCNMA1-211ENST00000404857 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
KCNMA1-211ENST00000404857 SUPT5HO00267 1087 aaKnown RBP14□□□□□ -0.17
KCNMA1-211ENST00000404857 BAZ1BQ9UIG0 1483 aaKnown RBP14□□□□□ -0.17
KCNMA1-211ENST00000404857 CCDC88BA6NC98 1476 aa13.92□□□□□ -0.18
KCNMA1-211ENST00000404857 PABPN1Q86U42 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
KCNMA1-211ENST00000404857 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
KCNMA1-211ENST00000404857 BIVM-ERCC5R4GMW8 1640 aa13.87□□□□□ -0.19
KCNMA1-211ENST00000404857 CFTRP13569 1480 aa13.84□□□□□ -0.19
KCNMA1-211ENST00000404857 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
KCNMA1-211ENST00000404857 TOP2BQ02880 1626 aa13.72□□□□□ -0.21
KCNMA1-211ENST00000404857 PPARGC1BQ86YN6 1023 aaKnown RBP13.71□□□□□ -0.21
KCNMA1-211ENST00000404857 CADPSQ9ULU8 1353 aa13.62□□□□□ -0.23
KCNMA1-211ENST00000404857 ABCC8Q09428 1581 aa13.6□□□□□ -0.23
KCNMA1-211ENST00000404857 DNMBPQ6XZF7 1577 aa13.59□□□□□ -0.23
KCNMA1-211ENST00000404857 KIF21AQ7Z4S6 1674 aa13.59□□□□□ -0.23
KCNMA1-211ENST00000404857 SYNJ1O43426 1573 aa13.57□□□□□ -0.24
KCNMA1-211ENST00000404857 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
KCNMA1-211ENST00000404857 HRCP23327 699 aa13.55□□□□□ -0.24
KCNMA1-211ENST00000404857 WDR62O43379 1518 aa13.54□□□□□ -0.24
KCNMA1-211ENST00000404857 CUX1P39880 1505 aa13.52□□□□□ -0.25
KCNMA1-211ENST00000404857 PCGF6Q9BYE7 350 aa13.51□□□□□ -0.25
KCNMA1-211ENST00000404857 EEA1Q15075 1411 aa13.48□□□□□ -0.25
KCNMA1-211ENST00000404857 CHIC1Q5VXU3 224 aa13.47□□□□□ -0.25
KCNMA1-211ENST00000404857 FANCD2Q9BXW9 1451 aa13.46□□□□□ -0.26
KCNMA1-211ENST00000404857 TARBP1Q13395 1621 aaKnown RBP13.45□□□□□ -0.26
KCNMA1-211ENST00000404857 ABCA5Q8WWZ7 1642 aa13.44□□□□□ -0.26
KCNMA1-211ENST00000404857 WRNQ14191 1432 aaPredicted RBP eCLIP13.44□□□□□ -0.26
KCNMA1-211ENST00000404857 PDS5BQ9NTI5 1447 aa13.44□□□□□ -0.26
KCNMA1-211ENST00000404857 KIF21BO75037 1637 aa13.44□□□□□ -0.26
KCNMA1-211ENST00000404857 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
KCNMA1-211ENST00000404857 TOPBP1Q92547 1522 aa13.4□□□□□ -0.26
KCNMA1-211ENST00000404857 MRC2Q9UBG0 1479 aa13.39□□□□□ -0.27
KCNMA1-211ENST00000404857 URB2Q14146 1524 aaKnown RBP13.38□□□□□ -0.27
KCNMA1-211ENST00000404857 ABCA10Q8WWZ4 1543 aa13.38□□□□□ -0.27
KCNMA1-211ENST00000404857 CUL7Q14999 1698 aa13.37□□□□□ -0.27
KCNMA1-211ENST00000404857 ERICH3Q5RHP9 1530 aa13.36□□□□□ -0.27
KCNMA1-211ENST00000404857 NESP48681 1621 aa13.34□□□□□ -0.27
KCNMA1-211ENST00000404857 PBRM1Q86U86 1689 aa13.32□□□□□ -0.28
KCNMA1-211ENST00000404857 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
KCNMA1-211ENST00000404857 POLA1P09884 1462 aaPredicted RBP13.27□□□□□ -0.29
KCNMA1-211ENST00000404857 FGD5Q6ZNL6 1462 aa13.26□□□□□ -0.29
KCNMA1-211ENST00000404857 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
KCNMA1-211ENST00000404857 CUX2O14529 1486 aa13.23□□□□□ -0.29
KCNMA1-211ENST00000404857 PRXQ9BXM0 1461 aa13.22□□□□□ -0.29
KCNMA1-211ENST00000404857 CTTNBP2Q8WZ74 1663 aa13.2□□□□□ -0.3
KCNMA1-211ENST00000404857 LOC105371045A0A1W2PR82 267 aa13.18□□□□□ -0.3
KCNMA1-211ENST00000404857 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
KCNMA1-211ENST00000404857 ADAMTS12P58397 1594 aa13.18□□□□□ -0.3
KCNMA1-211ENST00000404857 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
KCNMA1-211ENST00000404857 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
KCNMA1-211ENST00000404857 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
KCNMA1-211ENST00000404857 GOLGA3Q08378 1498 aa13.07□□□□□ -0.32
KCNMA1-211ENST00000404857 MAGI1Q96QZ7 1491 aaPredicted RBP13.07□□□□□ -0.32
KCNMA1-211ENST00000404857 SOGA1O94964 1423 aa13.06□□□□□ -0.32
KCNMA1-211ENST00000404857 SAMD9Q5K651 1589 aa13.05□□□□□ -0.32
KCNMA1-211ENST00000404857 GRIN2BQ13224 1484 aa13.03□□□□□ -0.32
KCNMA1-211ENST00000404857 SHROOM2Q13796 1616 aa13.02□□□□□ -0.32
KCNMA1-211ENST00000404857 EFCAB5A4FU69 1503 aa13.02□□□□□ -0.33
KCNMA1-211ENST00000404857 RUSC2Q8N2Y8 1516 aa13.02□□□□□ -0.33
KCNMA1-211ENST00000404857 GAPVD1Q14C86 1478 aa13.01□□□□□ -0.33
KCNMA1-211ENST00000404857 TRIM41Q8WV44 630 aa13.01□□□□□ -0.33
KCNMA1-211ENST00000404857 TNIKQ9UKE5 1360 aa13.01□□□□□ -0.33
KCNMA1-211ENST00000404857 IGF1RP08069 1367 aa13□□□□□ -0.33
KCNMA1-211ENST00000404857 FAM9AQ8IZU1 332 aaPredicted RBP13□□□□□ -0.33
KCNMA1-211ENST00000404857 RAPGEF2Q9Y4G8 1499 aa12.99□□□□□ -0.33
KCNMA1-211ENST00000404857 EHMT2Q96KQ7 1210 aa12.99□□□□□ -0.33
KCNMA1-211ENST00000404857 ERCC6Q03468 1493 aa12.99□□□□□ -0.33
KCNMA1-211ENST00000404857 RAD54L2Q9Y4B4 1467 aa12.98□□□□□ -0.33
KCNMA1-211ENST00000404857 FHAD1B1AJZ9 1412 aa12.97□□□□□ -0.33
KCNMA1-211ENST00000404857 UGGT2Q9NYU1 1516 aa12.95□□□□□ -0.34
KCNMA1-211ENST00000404857 MAP3K1Q13233 1512 aa12.94□□□□□ -0.34
KCNMA1-211ENST00000404857 NUP160Q12769 1436 aa12.92□□□□□ -0.34
KCNMA1-211ENST00000404857 SYNJ2O15056 1496 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms