RNA–Protein interactions for RNA: ENST00000403230.1

DDX17-203, Transcript of DEAD-box helicase 17, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DDX17, Length 2,322 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-203ENST00000403230 NISCHQ9Y2I1 1504 aa34.89■■■■□ 3.18
DDX17-203ENST00000403230 CCDC180Q9P1Z9 1646 aa30.21■■■□□ 2.43
DDX17-203ENST00000403230 ZCCHC6Q5VYS8 1495 aaKnown RBP29.33■■■□□ 2.29
DDX17-203ENST00000403230 DCAF8L2P0C7V8 631 aa29.11■■■□□ 2.25
DDX17-203ENST00000403230 SHROOM4Q9ULL8 1493 aa29.11■■■□□ 2.25
DDX17-203ENST00000403230 ABCC9O60706 1549 aa28.72■■■□□ 2.19
DDX17-203ENST00000403230 DCAF1Q9Y4B6 1507 aa28.66■■■□□ 2.18
DDX17-203ENST00000403230 SUPT5HO00267 1087 aaKnown RBP28.54■■■□□ 2.16
DDX17-203ENST00000403230 MYO15BQ96JP2 1530 aa28.21■■■□□ 2.11
DDX17-203ENST00000403230 NACADO15069 1562 aa28.11■■■□□ 2.09
DDX17-203ENST00000403230 SCRIBQ14160 1630 aa28.08■■■□□ 2.09
DDX17-203ENST00000403230 RB1CC1Q8TDY2 1594 aa27.88■■■□□ 2.05
DDX17-203ENST00000403230 CHIC1Q5VXU3 224 aa27.86■■■□□ 2.05
DDX17-203ENST00000403230 UNC13AQ9UPW8 1703 aa27.49■■□□□ 1.99
DDX17-203ENST00000403230 CECR2Q9BXF3 1484 aa27.25■■□□□ 1.95
DDX17-203ENST00000403230 PABPN1Q86U42 306 aaKnown RBP eCLIP27.21■■□□□ 1.95
DDX17-203ENST00000403230 RSF1Q96T23 1441 aaPredicted RBP27.19■■□□□ 1.94
DDX17-203ENST00000403230 HRCP23327 699 aa27.18■■□□□ 1.94
DDX17-203ENST00000403230 BICRAQ9NZM4 1560 aa27.14■■□□□ 1.93
DDX17-203ENST00000403230 PCGF6Q9BYE7 350 aa27.07■■□□□ 1.92
DDX17-203ENST00000403230 MROH2BQ7Z745 1585 aa27.07■■□□□ 1.92
DDX17-203ENST00000403230 LOC105371045A0A1W2PR82 267 aa27.05■■□□□ 1.92
DDX17-203ENST00000403230 WIZO95785 1651 aa26.89■■□□□ 1.9
DDX17-203ENST00000403230 BAZ1AQ9NRL2 1556 aaPredicted RBP26.89■■□□□ 1.9
DDX17-203ENST00000403230 SMARCA4P51532 1647 aa26.8■■□□□ 1.88
DDX17-203ENST00000403230 PPARGC1BQ86YN6 1023 aaKnown RBP26.67■■□□□ 1.86
DDX17-203ENST00000403230 TRIM41Q8WV44 630 aa26.54■■□□□ 1.84
DDX17-203ENST00000403230 TRIM26Q12899 539 aaPredicted RBP26.51■■□□□ 1.83
DDX17-203ENST00000403230 TOP2AP11388 1531 aaKnown RBP26.46■■□□□ 1.83
DDX17-203ENST00000403230 FAM9AQ8IZU1 332 aaPredicted RBP26.38■■□□□ 1.81
DDX17-203ENST00000403230 PEG3Q9GZU2 1588 aa26.35■■□□□ 1.81
DDX17-203ENST00000403230 ATAD2BQ9ULI0 1458 aa26.32■■□□□ 1.8
DDX17-203ENST00000403230 EIF4G1Q04637 1599 aaKnown RBP26.3■■□□□ 1.8
DDX17-203ENST00000403230 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
DDX17-203ENST00000403230 SMARCA2P51531 1590 aa26.29■■□□□ 1.8
DDX17-203ENST00000403230 BAZ1BQ9UIG0 1483 aaKnown RBP26.2■■□□□ 1.78
DDX17-203ENST00000403230 EHMT2Q96KQ7 1210 aa26.16■■□□□ 1.78
DDX17-203ENST00000403230 NCAPD3P42695 1498 aa25.99■■□□□ 1.75
DDX17-203ENST00000403230 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
DDX17-203ENST00000403230 ABCC8Q09428 1581 aa25.92■■□□□ 1.74
DDX17-203ENST00000403230 ZEB1P37275 1124 aaPredicted RBP25.91■■□□□ 1.74
DDX17-203ENST00000403230 CC2D2AQ9P2K1 1620 aa25.91■■□□□ 1.74
DDX17-203ENST00000403230 SOGA1O94964 1423 aa25.6■■□□□ 1.69
DDX17-203ENST00000403230 WRNQ14191 1432 aaPredicted RBP eCLIP25.58■■□□□ 1.69
DDX17-203ENST00000403230 SYNJ1O43426 1573 aa25.53■■□□□ 1.68
DDX17-203ENST00000403230 RUSC2Q8N2Y8 1516 aa25.52■■□□□ 1.68
DDX17-203ENST00000403230 CEP162Q5TB80 1403 aa25.5■■□□□ 1.67
DDX17-203ENST00000403230 CFTRP13569 1480 aa25.5■■□□□ 1.67
DDX17-203ENST00000403230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.47■■□□□ 1.67
DDX17-203ENST00000403230 DNAJC5BQ9UF47 199 aa25.46■■□□□ 1.67
DDX17-203ENST00000403230 TNIKQ9UKE5 1360 aa25.44■■□□□ 1.66
DDX17-203ENST00000403230 CADPSQ9ULU8 1353 aa25.39■■□□□ 1.66
DDX17-203ENST00000403230 EEA1Q15075 1411 aa25.39■■□□□ 1.66
DDX17-203ENST00000403230 CSRNP3Q8WYN3 585 aa25.38■■□□□ 1.65
DDX17-203ENST00000403230 TTBK1Q5TCY1 1321 aaPredicted RBP25.35■■□□□ 1.65
DDX17-203ENST00000403230 PRDM2Q13029 1718 aa25.35■■□□□ 1.65
DDX17-203ENST00000403230 CCER1Q8TC90 406 aaPredicted RBP25.34■■□□□ 1.65
DDX17-203ENST00000403230 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
DDX17-203ENST00000403230 NESP48681 1621 aa25.3■■□□□ 1.64
DDX17-203ENST00000403230 GOLGA3Q08378 1498 aa25.28■■□□□ 1.64
DDX17-203ENST00000403230 CUX1P39880 1505 aa25.27■■□□□ 1.64
DDX17-203ENST00000403230 UBTFP17480 764 aaKnown RBP25.25■■□□□ 1.63
DDX17-203ENST00000403230 BIVM-ERCC5R4GMW8 1640 aa25.25■■□□□ 1.63
DDX17-203ENST00000403230 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
DDX17-203ENST00000403230 SCAF1Q9H7N4 1312 aaKnown RBP25.16■■□□□ 1.62
DDX17-203ENST00000403230 KIF21BO75037 1637 aa25.15■■□□□ 1.62
DDX17-203ENST00000403230 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
DDX17-203ENST00000403230 LAMC3Q9Y6N6 1575 aa25.07■■□□□ 1.6
DDX17-203ENST00000403230 CLIP1P30622 1438 aa24.98■■□□□ 1.59
DDX17-203ENST00000403230 FGD5Q6ZNL6 1462 aa24.97■■□□□ 1.59
DDX17-203ENST00000403230 RAPGEF2Q9Y4G8 1499 aa24.97■■□□□ 1.59
DDX17-203ENST00000403230 DIEXFQ68CQ4 756 aaKnown RBP24.93■■□□□ 1.58
DDX17-203ENST00000403230 KIF21AQ7Z4S6 1674 aa24.92■■□□□ 1.58
DDX17-203ENST00000403230 VPS8Q8N3P4 1428 aa24.91■■□□□ 1.58
DDX17-203ENST00000403230 PDS5BQ9NTI5 1447 aa24.9■■□□□ 1.58
DDX17-203ENST00000403230 TOPBP1Q92547 1522 aa24.9■■□□□ 1.58
DDX17-203ENST00000403230 DNMBPQ6XZF7 1577 aa24.9■■□□□ 1.58
DDX17-203ENST00000403230 KIF27Q86VH2 1401 aa24.88■■□□□ 1.57
DDX17-203ENST00000403230 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
DDX17-203ENST00000403230 PELP1Q8IZL8 1130 aaKnown RBP24.86■■□□□ 1.57
DDX17-203ENST00000403230 CUX2O14529 1486 aa24.86■■□□□ 1.57
DDX17-203ENST00000403230 NEUROD1Q13562 356 aa24.83■■□□□ 1.57
DDX17-203ENST00000403230 ACIN1Q9UKV3 1341 aaKnown RBP24.83■■□□□ 1.57
DDX17-203ENST00000403230 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
DDX17-203ENST00000403230 RANGAP1P46060 587 aaPredicted RBP24.82■■□□□ 1.56
DDX17-203ENST00000403230 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
DDX17-203ENST00000403230 HNRNPUL2Q1KMD3 747 aaKnown RBP24.81■■□□□ 1.56
DDX17-203ENST00000403230 PRXQ9BXM0 1461 aa24.75■■□□□ 1.55
DDX17-203ENST00000403230 ZNF316A6NFI3 1004 aaPredicted RBP24.73■■□□□ 1.55
DDX17-203ENST00000403230 ERICH3Q5RHP9 1530 aa24.7■■□□□ 1.55
DDX17-203ENST00000403230 IGF1RP08069 1367 aa24.69■■□□□ 1.54
DDX17-203ENST00000403230 ABCA10Q8WWZ4 1543 aa24.66■■□□□ 1.54
DDX17-203ENST00000403230 ARAP1Q96P48 1450 aa24.65■■□□□ 1.54
DDX17-203ENST00000403230 APLP2Q06481 763 aa24.64■■□□□ 1.54
DDX17-203ENST00000403230 MRC2Q9UBG0 1479 aa24.59■■□□□ 1.53
DDX17-203ENST00000403230 WDR97A6NE52 1622 aa24.58■■□□□ 1.53
DDX17-203ENST00000403230 TDRD9Q8NDG6 1382 aaKnown RBP24.58■■□□□ 1.52
DDX17-203ENST00000403230 CENPBP07199 599 aaPredicted RBP24.57■■□□□ 1.52
DDX17-203ENST00000403230 CARMIL1Q5VZK9 1371 aa24.57■■□□□ 1.52
DDX17-203ENST00000403230 ERCC6Q03468 1493 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms