RNA–Protein interactions for RNA: ENST00000398213.4

PYM1-202, Transcript of PYM homolog 1, exon junction complex associated factor, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PYM1, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYM1-202ENST00000398213 AEBP2Q6ZN18 517 aaPredicted RBP33.39■■■□□ 2.94
PYM1-202ENST00000398213 CHIC1Q5VXU3 224 aa31.35■■■□□ 2.61
PYM1-202ENST00000398213 SENP3Q9H4L4 574 aaPredicted RBP28.5■■■□□ 2.15
PYM1-202ENST00000398213 PHF23Q9BUL5 403 aaPredicted RBP28.12■■■□□ 2.09
PYM1-202ENST00000398213 FOXD1Q16676 465 aa26.63■■□□□ 1.85
PYM1-202ENST00000398213 NISCHQ9Y2I1 1504 aa25.03■■□□□ 1.6
PYM1-202ENST00000398213 MSH5O43196 834 aa25.02■■□□□ 1.6
PYM1-202ENST00000398213 POTEDQ86YR6 584 aa25.01■■□□□ 1.59
PYM1-202ENST00000398213 PLPPR3Q6T4P5 718 aa24.92■■□□□ 1.58
PYM1-202ENST00000398213 PIAS4Q8N2W9 510 aaPredicted RBP24.88■■□□□ 1.57
PYM1-202ENST00000398213 PPP6R1Q9UPN7 881 aa24.67■■□□□ 1.54
PYM1-202ENST00000398213 ADRA2BP18089 450 aa24.62■■□□□ 1.53
PYM1-202ENST00000398213 ABCC9O60706 1549 aa22.82■■□□□ 1.24
PYM1-202ENST00000398213 MAPK8IP2Q13387 824 aaPredicted RBP22.71■■□□□ 1.23
PYM1-202ENST00000398213 CCDC180Q9P1Z9 1646 aa22.61■■□□□ 1.21
PYM1-202ENST00000398213 DMRT2Q9Y5R5 561 aa22.54■■□□□ 1.2
PYM1-202ENST00000398213 SCAF1Q9H7N4 1312 aaKnown RBP22.45■■□□□ 1.18
PYM1-202ENST00000398213 DCAF8L1A6NGE4 600 aa21.84■■□□□ 1.09
PYM1-202ENST00000398213 PPP4R3CPQ6ZMV5 832 aa21.83■■□□□ 1.09
PYM1-202ENST00000398213 CACNB1Q02641 598 aaPredicted RBP21.76■■□□□ 1.07
PYM1-202ENST00000398213 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
PYM1-202ENST00000398213 HOXD11P31277 338 aaPredicted RBP21.54■■□□□ 1.04
PYM1-202ENST00000398213 DNAJC5BQ9UF47 199 aa21.54■■□□□ 1.04
PYM1-202ENST00000398213 CNKSR2Q8WXI2 1034 aa21.46■■□□□ 1.03
PYM1-202ENST00000398213 NACADO15069 1562 aa21.42■■□□□ 1.02
PYM1-202ENST00000398213 RNF216Q9NWF9 866 aaPredicted RBP21.32■■□□□ 1
PYM1-202ENST00000398213 RNF39Q9H2S5 420 aa21.31■■□□□ 1
PYM1-202ENST00000398213 DCAF8L2P0C7V8 631 aa21.28■■□□□ 1
PYM1-202ENST00000398213 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
PYM1-202ENST00000398213 UNC13AQ9UPW8 1703 aa21.13■□□□□ 0.97
PYM1-202ENST00000398213 MYO15BQ96JP2 1530 aa21.02■□□□□ 0.96
PYM1-202ENST00000398213 C1QBPQ07021 282 aaKnown RBP20.96■□□□□ 0.95
PYM1-202ENST00000398213 BICRAQ9NZM4 1560 aa20.96■□□□□ 0.95
PYM1-202ENST00000398213 NCBP3Q53F19 620 aaKnown RBP20.87■□□□□ 0.93
PYM1-202ENST00000398213 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
PYM1-202ENST00000398213 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
PYM1-202ENST00000398213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.67■□□□□ 0.91e-6■■■■□ 21.2
PYM1-202ENST00000398213 DCAF1Q9Y4B6 1507 aa20.66■□□□□ 0.9
PYM1-202ENST00000398213 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
PYM1-202ENST00000398213 NPM3O75607 178 aaKnown RBP20.6■□□□□ 0.89
PYM1-202ENST00000398213 CECR2Q9BXF3 1484 aa20.59■□□□□ 0.89
PYM1-202ENST00000398213 SCRIBQ14160 1630 aa20.59■□□□□ 0.89
PYM1-202ENST00000398213 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
PYM1-202ENST00000398213 U3KPZ7 1027 aaPredicted RBP20.14■□□□□ 0.81
PYM1-202ENST00000398213 CAPN15O75808 1086 aa20.02■□□□□ 0.8
PYM1-202ENST00000398213 DNAJC5Q9H3Z4 198 aa20.01■□□□□ 0.79
PYM1-202ENST00000398213 SPINK5Q9NQ38 1064 aaPredicted RBP20■□□□□ 0.79
PYM1-202ENST00000398213 KCNA4P22459 653 aa19.95■□□□□ 0.78
PYM1-202ENST00000398213 DSG3P32926 999 aa19.88■□□□□ 0.77
PYM1-202ENST00000398213 CUX2O14529 1486 aa19.79■□□□□ 0.76
PYM1-202ENST00000398213 ERCC6Q03468 1493 aa19.77■□□□□ 0.76
PYM1-202ENST00000398213 NCAPD3P42695 1498 aa19.74■□□□□ 0.75
PYM1-202ENST00000398213 SLC4A2P04920 1241 aa19.73■□□□□ 0.75
PYM1-202ENST00000398213 ATAD2BQ9ULI0 1458 aa19.66■□□□□ 0.74
PYM1-202ENST00000398213 TRHP20396 242 aaPredicted RBP19.64■□□□□ 0.73
PYM1-202ENST00000398213 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
PYM1-202ENST00000398213 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
PYM1-202ENST00000398213 SMARCA4P51532 1647 aa19.59■□□□□ 0.73
PYM1-202ENST00000398213 ABCB7O75027 752 aa19.56■□□□□ 0.72
PYM1-202ENST00000398213 POTEHQ6S545 545 aa19.55■□□□□ 0.72
PYM1-202ENST00000398213 NESP48681 1621 aa19.51■□□□□ 0.71
PYM1-202ENST00000398213 APLP2Q06481 763 aa19.51■□□□□ 0.71
PYM1-202ENST00000398213 BAZ1BQ9UIG0 1483 aaKnown RBP19.49■□□□□ 0.71
PYM1-202ENST00000398213 ZNF219Q9P2Y4 722 aaPredicted RBP19.48■□□□□ 0.71
PYM1-202ENST00000398213 BAZ1AQ9NRL2 1556 aaPredicted RBP19.48■□□□□ 0.71
PYM1-202ENST00000398213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.41■□□□□ 0.7
PYM1-202ENST00000398213 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
PYM1-202ENST00000398213 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.69
PYM1-202ENST00000398213 PEG3Q9GZU2 1588 aa19.38■□□□□ 0.69
PYM1-202ENST00000398213 LAMC3Q9Y6N6 1575 aa19.38■□□□□ 0.69
PYM1-202ENST00000398213 SAMD1Q6SPF0 538 aaPredicted RBP19.31■□□□□ 0.68
PYM1-202ENST00000398213 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
PYM1-202ENST00000398213 PDS5BQ9NTI5 1447 aa19.28■□□□□ 0.68
PYM1-202ENST00000398213 MROH2BQ7Z745 1585 aa19.27■□□□□ 0.68
PYM1-202ENST00000398213 CADPSQ9ULU8 1353 aa19.14■□□□□ 0.65
PYM1-202ENST00000398213 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
PYM1-202ENST00000398213 TRIM41Q8WV44 630 aa19.09■□□□□ 0.65
PYM1-202ENST00000398213 WDR62O43379 1518 aa19.06■□□□□ 0.64
PYM1-202ENST00000398213 WIZO95785 1651 aa19.06■□□□□ 0.64
PYM1-202ENST00000398213 MYCNP04198 464 aaPredicted RBP19.04■□□□□ 0.64
PYM1-202ENST00000398213 CEP164Q9UPV0 1460 aa19.02■□□□□ 0.63
PYM1-202ENST00000398213 POLA2Q14181 598 aa18.97■□□□□ 0.63
PYM1-202ENST00000398213 RBM42Q9BTD8 480 aaKnown RBP18.96■□□□□ 0.63
PYM1-202ENST00000398213 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
PYM1-202ENST00000398213 CFTRP13569 1480 aa18.87■□□□□ 0.61
PYM1-202ENST00000398213 OSCARQ8IYS5 282 aa18.83■□□□□ 0.6
PYM1-202ENST00000398213 TOP2AP11388 1531 aaKnown RBP18.8■□□□□ 0.6
PYM1-202ENST00000398213 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
PYM1-202ENST00000398213 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
PYM1-202ENST00000398213 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
PYM1-202ENST00000398213 PRDM2Q13029 1718 aa18.73■□□□□ 0.59
PYM1-202ENST00000398213 CHRDL2Q6WN34 429 aa18.71■□□□□ 0.59
PYM1-202ENST00000398213 FOXD4L1Q9NU39 408 aa18.69■□□□□ 0.58
PYM1-202ENST00000398213 ATF5Q9Y2D1 282 aaPredicted RBP18.68■□□□□ 0.58
PYM1-202ENST00000398213 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
PYM1-202ENST00000398213 RIMBP3CA6NJZ7 1639 aa18.62■□□□□ 0.57
PYM1-202ENST00000398213 RIMBP3BA6NNM3 1639 aa18.62■□□□□ 0.57
PYM1-202ENST00000398213 RIMBP3Q9UFD9 1639 aa18.62■□□□□ 0.57
PYM1-202ENST00000398213 ZNF608Q9ULD9 1512 aaPredicted RBP18.59■□□□□ 0.57
PYM1-202ENST00000398213 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms