RNA–Protein interactions for RNA: ENST00000397992.5

ZFHX3-203, Transcript of zinc finger homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene ZFHX3, Length 13,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX3-203ENST00000397992 PELP1Q8IZL8 1130 aaKnown RBP15.24■□□□□ 0.03
ZFHX3-203ENST00000397992 MYT1Q01538 1121 aa14.96□□□□□ -0.01
ZFHX3-203ENST00000397992 DCAF8L2P0C7V8 631 aa14.82□□□□□ -0.04
ZFHX3-203ENST00000397992 ERICH6Q7L0X2 663 aa14.5□□□□□ -0.09
ZFHX3-203ENST00000397992 CCER1Q8TC90 406 aaPredicted RBP14.42□□□□□ -0.1
ZFHX3-203ENST00000397992 CENPBP07199 599 aaPredicted RBP14.4□□□□□ -0.1
ZFHX3-203ENST00000397992 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
ZFHX3-203ENST00000397992 APLP2Q06481 763 aa14.21□□□□□ -0.14
ZFHX3-203ENST00000397992 ZEB1P37275 1124 aaPredicted RBP14.12□□□□□ -0.15
ZFHX3-203ENST00000397992 PCGF6Q9BYE7 350 aa14.1□□□□□ -0.15
ZFHX3-203ENST00000397992 FAM9AQ8IZU1 332 aaPredicted RBP14.1□□□□□ -0.15
ZFHX3-203ENST00000397992 NEFLP07196 543 aa14□□□□□ -0.17
ZFHX3-203ENST00000397992 TTBK1Q5TCY1 1321 aaPredicted RBP13.95□□□□□ -0.18
ZFHX3-203ENST00000397992 YTHDC1Q96MU7 727 aaKnown RBP13.95□□□□□ -0.18
ZFHX3-203ENST00000397992 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
ZFHX3-203ENST00000397992 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
ZFHX3-203ENST00000397992 SHROOM4Q9ULL8 1493 aa13.81□□□□□ -0.2
ZFHX3-203ENST00000397992 DAXXQ9UER7 740 aaPredicted RBP13.74□□□□□ -0.21
ZFHX3-203ENST00000397992 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
ZFHX3-203ENST00000397992 HRCP23327 699 aa13.54□□□□□ -0.24
ZFHX3-203ENST00000397992 ZNF316A6NFI3 1004 aaPredicted RBP13.41□□□□□ -0.26
ZFHX3-203ENST00000397992 TRIM26Q12899 539 aaPredicted RBP13.36□□□□□ -0.27
ZFHX3-203ENST00000397992 TRIM41Q8WV44 630 aa13.35□□□□□ -0.27
ZFHX3-203ENST00000397992 UBTFP17480 764 aaKnown RBP13.29□□□□□ -0.28
ZFHX3-203ENST00000397992 ATP1B4Q9UN42 357 aaPredicted RBP13.27□□□□□ -0.28
ZFHX3-203ENST00000397992 RANGAP1P46060 587 aaPredicted RBP13.2□□□□□ -0.3
ZFHX3-203ENST00000397992 DIEXFQ68CQ4 756 aaKnown RBP13.16□□□□□ -0.3
ZFHX3-203ENST00000397992 GLIPR1L2Q4G1C9 344 aa13.15□□□□□ -0.3
ZFHX3-203ENST00000397992 GTF3C3Q9Y5Q9 886 aa13.15□□□□□ -0.3
ZFHX3-203ENST00000397992 CLSPNQ9HAW4 1339 aa13.12□□□□□ -0.31
ZFHX3-203ENST00000397992 PPARGC1BQ86YN6 1023 aaKnown RBP13.11□□□□□ -0.31
ZFHX3-203ENST00000397992 EIF5BO60841 1220 aaKnown RBP13.1□□□□□ -0.31
ZFHX3-203ENST00000397992 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
ZFHX3-203ENST00000397992 MYT1LQ9UL68 1186 aa13.02□□□□□ -0.33
ZFHX3-203ENST00000397992 BCANQ96GW7 911 aa13□□□□□ -0.33
ZFHX3-203ENST00000397992 POLR3GLQ9BT43 218 aa12.99□□□□□ -0.33
ZFHX3-203ENST00000397992 ANP32AP39687 249 aaKnown RBP12.95□□□□□ -0.34
ZFHX3-203ENST00000397992 ACIN1Q9UKV3 1341 aaKnown RBP12.92□□□□□ -0.34
ZFHX3-203ENST00000397992 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
ZFHX3-203ENST00000397992 ANP32BQ92688 251 aaKnown RBP12.88□□□□□ -0.35
ZFHX3-203ENST00000397992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.85□□□□□ -0.35
ZFHX3-203ENST00000397992 CNGB1Q14028 1251 aaPredicted RBP12.82□□□□□ -0.36
ZFHX3-203ENST00000397992 ITGAEP38570 1179 aa12.82□□□□□ -0.36
ZFHX3-203ENST00000397992 HNRNPUL2Q1KMD3 747 aaKnown RBP12.81□□□□□ -0.36
ZFHX3-203ENST00000397992 SLC4A1APQ9BWU0 796 aaKnown RBP12.79□□□□□ -0.36
ZFHX3-203ENST00000397992 ANP32CO43423 234 aa12.78□□□□□ -0.36
ZFHX3-203ENST00000397992 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
ZFHX3-203ENST00000397992 NEFMP07197 916 aa12.67□□□□□ -0.38
ZFHX3-203ENST00000397992 NPM2Q86SE8 214 aaKnown RBP12.67□□□□□ -0.38
ZFHX3-203ENST00000397992 NBR1Q14596 966 aa12.67□□□□□ -0.38
ZFHX3-203ENST00000397992 CANXP27824 592 aaKnown RBP12.64□□□□□ -0.39
ZFHX3-203ENST00000397992 CHIC1Q5VXU3 224 aa12.62□□□□□ -0.39
ZFHX3-203ENST00000397992 HSP90AA1P07900 732 aaKnown RBP12.62□□□□□ -0.39
ZFHX3-203ENST00000397992 TNNT2P45379 298 aaPredicted RBP12.62□□□□□ -0.39
ZFHX3-203ENST00000397992 UPF2Q9HAU5 1272 aaKnown RBP12.6□□□□□ -0.39
ZFHX3-203ENST00000397992 FKBP8Q14318 412 aa12.55□□□□□ -0.4
ZFHX3-203ENST00000397992 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
ZFHX3-203ENST00000397992 NEUROD1Q13562 356 aa12.52□□□□□ -0.4
ZFHX3-203ENST00000397992 ANP32EQ9BTT0 268 aa12.52□□□□□ -0.41
ZFHX3-203ENST00000397992 FAM50AQ14320 339 aaKnown RBP12.51□□□□□ -0.41
ZFHX3-203ENST00000397992 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
ZFHX3-203ENST00000397992 ARXQ96QS3 562 aa12.46□□□□□ -0.41
ZFHX3-203ENST00000397992 BCL11AQ9H165 835 aa12.45□□□□□ -0.42
ZFHX3-203ENST00000397992 ERICH6BQ5W0A0 696 aa12.41□□□□□ -0.42
ZFHX3-203ENST00000397992 CCDC136Q96JN2 1154 aa12.41□□□□□ -0.42
ZFHX3-203ENST00000397992 CDK11BP21127 795 aaKnown RBP12.41□□□□□ -0.42
ZFHX3-203ENST00000397992 TRIM44Q96DX7 344 aaPredicted RBP12.4□□□□□ -0.42
ZFHX3-203ENST00000397992 SLC24A1O60721 1099 aa12.38□□□□□ -0.43
ZFHX3-203ENST00000397992 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.37□□□□□ -0.43
ZFHX3-203ENST00000397992 NAP1L5Q96NT1 182 aaPredicted RBP12.36□□□□□ -0.43
ZFHX3-203ENST00000397992 DDRGK1Q96HY6 314 aa12.36□□□□□ -0.43
ZFHX3-203ENST00000397992 ZNF326Q5BKZ1 582 aaKnown RBP12.36□□□□□ -0.43
ZFHX3-203ENST00000397992 HNRNPUQ00839 825 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■■□□□ 12.1
ZFHX3-203ENST00000397992 NCLP19338 710 aaKnown RBP12.32□□□□□ -0.44
ZFHX3-203ENST00000397992 BECN1Q14457 450 aa12.32□□□□□ -0.44
ZFHX3-203ENST00000397992 GOLGA6L22H0YM25 854 aa12.29□□□□□ -0.44
ZFHX3-203ENST00000397992 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
ZFHX3-203ENST00000397992 PTMAP06454 111 aaKnown RBP12.25□□□□□ -0.45
ZFHX3-203ENST00000397992 MYH16Q9H6N6 1097 aa12.24□□□□□ -0.45
ZFHX3-203ENST00000397992 PPM1GO15355 546 aaPredicted RBP12.22□□□□□ -0.45
ZFHX3-203ENST00000397992 DCAF1Q9Y4B6 1507 aa12.22□□□□□ -0.45
ZFHX3-203ENST00000397992 DNTTIP2Q5QJE6 756 aaKnown RBP12.22□□□□□ -0.45
ZFHX3-203ENST00000397992 TONSLQ96HA7 1378 aa12.21□□□□□ -0.46
ZFHX3-203ENST00000397992 FAM9BQ8IZU0 186 aa12.18□□□□□ -0.46
ZFHX3-203ENST00000397992 DEKP35659 375 aaKnown RBP12.18□□□□□ -0.46
ZFHX3-203ENST00000397992 NOP58Q9Y2X3 529 aaKnown RBP12.18□□□□□ -0.46
ZFHX3-203ENST00000397992 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
ZFHX3-203ENST00000397992 ZRSR1Q15695 479 aaKnown RBP12.14□□□□□ -0.47
ZFHX3-203ENST00000397992 TMC1Q8TDI8 760 aa12.14□□□□□ -0.47
ZFHX3-203ENST00000397992 IRX6P78412 446 aaPredicted RBP12.13□□□□□ -0.47
ZFHX3-203ENST00000397992 MIER1Q8N108 512 aa12.13□□□□□ -0.47
ZFHX3-203ENST00000397992 CHAF1AQ13111 956 aaPredicted RBP12.12□□□□□ -0.47
ZFHX3-203ENST00000397992 LAS1LQ9Y4W2 734 aaKnown RBP12.11□□□□□ -0.47
ZFHX3-203ENST00000397992 CASC1Q6TDU7 716 aa12.11□□□□□ -0.47
ZFHX3-203ENST00000397992 GOLGA6L6A8MZA4 724 aa12.11□□□□□ -0.47
ZFHX3-203ENST00000397992 WDR43Q15061 677 aaKnown RBP eCLIP12.11□□□□□ -0.474e-6■■■■□ 26.5
ZFHX3-203ENST00000397992 NRDCO43847 1150 aa12.1□□□□□ -0.47
ZFHX3-203ENST00000397992 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
ZFHX3-203ENST00000397992 MRS2Q9HD23 443 aa12.1□□□□□ -0.47
ZFHX3-203ENST00000397992 L1TD1Q5T7N2 865 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms