RNA–Protein interactions for RNA: ENST00000396499.5

CCDC125-203, Transcript of coiled-coil domain containing 125, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC125, Length 3,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC125-203ENST00000396499 NISCHQ9Y2I1 1504 aa17.34■□□□□ 0.37
CCDC125-203ENST00000396499 CHIC1Q5VXU3 224 aa15.8■□□□□ 0.12
CCDC125-203ENST00000396499 CCDC180Q9P1Z9 1646 aa15.7■□□□□ 0.1
CCDC125-203ENST00000396499 AEBP2Q6ZN18 517 aaPredicted RBP15.53■□□□□ 0.08
CCDC125-203ENST00000396499 DCAF1Q9Y4B6 1507 aa14.74□□□□□ -0.05
CCDC125-203ENST00000396499 MYO15BQ96JP2 1530 aa14.72□□□□□ -0.05
CCDC125-203ENST00000396499 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
CCDC125-203ENST00000396499 UNC13AQ9UPW8 1703 aa14.58□□□□□ -0.08
CCDC125-203ENST00000396499 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
CCDC125-203ENST00000396499 PHF23Q9BUL5 403 aaPredicted RBP14.37□□□□□ -0.11
CCDC125-203ENST00000396499 NACADO15069 1562 aa14.28□□□□□ -0.12
CCDC125-203ENST00000396499 BICRAQ9NZM4 1560 aa14.18□□□□□ -0.14
CCDC125-203ENST00000396499 RB1CC1Q8TDY2 1594 aa14.05□□□□□ -0.16
CCDC125-203ENST00000396499 ABCC9O60706 1549 aa13.97□□□□□ -0.17
CCDC125-203ENST00000396499 SHROOM4Q9ULL8 1493 aa13.9□□□□□ -0.18
CCDC125-203ENST00000396499 PEG3Q9GZU2 1588 aa13.74□□□□□ -0.21
CCDC125-203ENST00000396499 SCRIBQ14160 1630 aa13.71□□□□□ -0.21
CCDC125-203ENST00000396499 SLC24A1O60721 1099 aa13.69□□□□□ -0.22
CCDC125-203ENST00000396499 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
CCDC125-203ENST00000396499 KCNA4P22459 653 aa13.51□□□□□ -0.25
CCDC125-203ENST00000396499 EIF4G1Q04637 1599 aaKnown RBP13.5□□□□□ -0.25
CCDC125-203ENST00000396499 SMARCA4P51532 1647 aa13.49□□□□□ -0.25
CCDC125-203ENST00000396499 BAZ1AQ9NRL2 1556 aaPredicted RBP13.35□□□□□ -0.27
CCDC125-203ENST00000396499 MROH2BQ7Z745 1585 aa13.33□□□□□ -0.27
CCDC125-203ENST00000396499 PRDM2Q13029 1718 aa13.33□□□□□ -0.28
CCDC125-203ENST00000396499 CECR2Q9BXF3 1484 aa13.33□□□□□ -0.28
CCDC125-203ENST00000396499 WIZO95785 1651 aa13.3□□□□□ -0.28
CCDC125-203ENST00000396499 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
CCDC125-203ENST00000396499 SMARCA2P51531 1590 aa13.25□□□□□ -0.29
CCDC125-203ENST00000396499 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.29
CCDC125-203ENST00000396499 CC2D2AQ9P2K1 1620 aa13.21□□□□□ -0.29
CCDC125-203ENST00000396499 ADRA2BP18089 450 aa13.21□□□□□ -0.3
CCDC125-203ENST00000396499 CSRNP3Q8WYN3 585 aa13.19□□□□□ -0.3
CCDC125-203ENST00000396499 RSF1Q96T23 1441 aaPredicted RBP13.17□□□□□ -0.3
CCDC125-203ENST00000396499 TOP2AP11388 1531 aaKnown RBP13.14□□□□□ -0.31
CCDC125-203ENST00000396499 NCAPD3P42695 1498 aa13.12□□□□□ -0.31
CCDC125-203ENST00000396499 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
CCDC125-203ENST00000396499 WDR97A6NE52 1622 aa12.89□□□□□ -0.35
CCDC125-203ENST00000396499 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
CCDC125-203ENST00000396499 BIVM-ERCC5R4GMW8 1640 aa12.82□□□□□ -0.36
CCDC125-203ENST00000396499 THOC2Q8NI27 1593 aaKnown RBP12.82□□□□□ -0.36
CCDC125-203ENST00000396499 KIF21AQ7Z4S6 1674 aa12.81□□□□□ -0.36
CCDC125-203ENST00000396499 CCDC88BA6NC98 1476 aa12.79□□□□□ -0.36
CCDC125-203ENST00000396499 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.37
CCDC125-203ENST00000396499 CFTRP13569 1480 aa12.75□□□□□ -0.37
CCDC125-203ENST00000396499 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC125-203ENST00000396499 DNAJC5BQ9UF47 199 aa12.74□□□□□ -0.37
CCDC125-203ENST00000396499 BAZ1BQ9UIG0 1483 aaKnown RBP12.7□□□□□ -0.38
CCDC125-203ENST00000396499 TARBP1Q13395 1621 aaKnown RBP12.62□□□□□ -0.39
CCDC125-203ENST00000396499 WDR62O43379 1518 aa12.61□□□□□ -0.39
CCDC125-203ENST00000396499 TOP2BQ02880 1626 aa12.61□□□□□ -0.39
CCDC125-203ENST00000396499 PPP6R1Q9UPN7 881 aa12.6□□□□□ -0.39
CCDC125-203ENST00000396499 SYNJ1O43426 1573 aa12.59□□□□□ -0.39
CCDC125-203ENST00000396499 PRKCSHP14314 528 aaPredicted RBP12.57□□□□□ -0.4
CCDC125-203ENST00000396499 CUX1P39880 1505 aa12.52□□□□□ -0.4
CCDC125-203ENST00000396499 ABCA5Q8WWZ7 1642 aa12.52□□□□□ -0.41
CCDC125-203ENST00000396499 NESP48681 1621 aa12.5□□□□□ -0.41
CCDC125-203ENST00000396499 DCAF8L2P0C7V8 631 aa12.5□□□□□ -0.41
CCDC125-203ENST00000396499 SENP3Q9H4L4 574 aaPredicted RBP12.5□□□□□ -0.41
CCDC125-203ENST00000396499 URB2Q14146 1524 aaKnown RBP12.47□□□□□ -0.41
CCDC125-203ENST00000396499 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
CCDC125-203ENST00000396499 DNMBPQ6XZF7 1577 aa12.46□□□□□ -0.41
CCDC125-203ENST00000396499 ZBTB22O15209 634 aa12.44□□□□□ -0.42
CCDC125-203ENST00000396499 CADPSQ9ULU8 1353 aa12.4□□□□□ -0.42
CCDC125-203ENST00000396499 PBRM1Q86U86 1689 aa12.4□□□□□ -0.42
CCDC125-203ENST00000396499 CUX2O14529 1486 aa12.39□□□□□ -0.43
CCDC125-203ENST00000396499 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
CCDC125-203ENST00000396499 TOPBP1Q92547 1522 aa12.33□□□□□ -0.44
CCDC125-203ENST00000396499 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
CCDC125-203ENST00000396499 ABCA10Q8WWZ4 1543 aa12.27□□□□□ -0.45
CCDC125-203ENST00000396499 EIF4G3O43432 1585 aaKnown RBP12.25□□□□□ -0.45
CCDC125-203ENST00000396499 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
CCDC125-203ENST00000396499 POLA1P09884 1462 aaPredicted RBP12.23□□□□□ -0.45
CCDC125-203ENST00000396499 SHROOM2Q13796 1616 aa12.21□□□□□ -0.45
CCDC125-203ENST00000396499 KIF21BO75037 1637 aa12.19□□□□□ -0.46
CCDC125-203ENST00000396499 CEP164Q9UPV0 1460 aa12.19□□□□□ -0.46
CCDC125-203ENST00000396499 ADAMTS12P58397 1594 aa12.18□□□□□ -0.46
CCDC125-203ENST00000396499 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
CCDC125-203ENST00000396499 CUL7Q14999 1698 aa12.16□□□□□ -0.46
CCDC125-203ENST00000396499 LRRIQ1Q96JM4 1722 aa12.15□□□□□ -0.46
CCDC125-203ENST00000396499 NPM3O75607 178 aaKnown RBP12.15□□□□□ -0.46
CCDC125-203ENST00000396499 CTTNBP2Q8WZ74 1663 aa12.14□□□□□ -0.47
CCDC125-203ENST00000396499 FGD5Q6ZNL6 1462 aa12.14□□□□□ -0.47
CCDC125-203ENST00000396499 ERICH3Q5RHP9 1530 aa12.14□□□□□ -0.47
CCDC125-203ENST00000396499 PPP4R3CPQ6ZMV5 832 aa12.12□□□□□ -0.47
CCDC125-203ENST00000396499 CHD1O14646 1710 aa12.11□□□□□ -0.47
CCDC125-203ENST00000396499 FKBP8Q14318 412 aa12.1□□□□□ -0.47
CCDC125-203ENST00000396499 PDS5BQ9NTI5 1447 aa12.09□□□□□ -0.47
CCDC125-203ENST00000396499 CLASP1Q7Z460 1538 aa12.09□□□□□ -0.47
CCDC125-203ENST00000396499 WRNQ14191 1432 aaPredicted RBP eCLIP12.09□□□□□ -0.47
CCDC125-203ENST00000396499 RUSC2Q8N2Y8 1516 aa12.08□□□□□ -0.48
CCDC125-203ENST00000396499 PRXQ9BXM0 1461 aa12.08□□□□□ -0.48
CCDC125-203ENST00000396499 SAMD9Q5K651 1589 aa12.06□□□□□ -0.48
CCDC125-203ENST00000396499 ZNF608Q9ULD9 1512 aaPredicted RBP12.03□□□□□ -0.48
CCDC125-203ENST00000396499 IFT140Q96RY7 1462 aa12.03□□□□□ -0.48
CCDC125-203ENST00000396499 MYT1Q01538 1121 aa12.03□□□□□ -0.48
CCDC125-203ENST00000396499 CEP170Q5SW79 1584 aa12.02□□□□□ -0.48
CCDC125-203ENST00000396499 RAD54L2Q9Y4B4 1467 aa11.99□□□□□ -0.49
CCDC125-203ENST00000396499 NCBP3Q53F19 620 aaKnown RBP11.97□□□□□ -0.49
CCDC125-203ENST00000396499 HAP1P54257 671 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms