RNA–Protein interactions for RNA: ENST00000396388.2

TSEN34-203, Transcript of tRNA splicing endonuclease subunit 34, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN34, Length 1,349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN34-203ENST00000396388 DDX3XO00571 662 aaKnown RBP eCLIP27.49■■□□□ 1.999e-21■■■■■ 35.4
TSEN34-203ENST00000396388 SF3B1O75533 1304 aaKnown RBP eCLIP28.97■■■□□ 2.232e-12■■■■■ 103.4
TSEN34-203ENST00000396388 SUB1P53999 127 aaKnown RBP eCLIP20.1■□□□□ 0.812e-11■■■■■ 54.4
TSEN34-203ENST00000396388 FTOQ9C0B1 505 aaKnown RBP eCLIP29.97■■■□□ 2.391e-9■□□□□ 9.8
TSEN34-203ENST00000396388 TIA1P31483 386 aaKnown RBP eCLIP24.71■■□□□ 1.556e-9■■■■□ 19.9
TSEN34-203ENST00000396388 RPS3P23396 243 aaKnown RBP eCLIP25.93■■□□□ 1.743e-7■■■■□ 24.5
TSEN34-203ENST00000396388 EFTUD2Q15029 972 aaKnown RBP eCLIP25.51■■□□□ 1.675e-7■■■■■ 36.5
TSEN34-203ENST00000396388 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.37■■■□□ 2.771e-6■□□□□ 9.9
TSEN34-203ENST00000396388 LARP4Q71RC2 724 aaKnown RBP eCLIP24.4■■□□□ 1.51e-6■□□□□ 10.2
TSEN34-203ENST00000396388 G3BP1Q13283 466 aaKnown RBP eCLIP32.95■■■□□ 2.862e-6■■□□□ 12.6
TSEN34-203ENST00000396388 PABPC4Q13310 644 aaKnown RBP eCLIP31.73■■■□□ 2.672e-6■■■□□ 15.6
TSEN34-203ENST00000396388 AQRO60306 1485 aaKnown RBP eCLIP46.6■■■■■ 5.055e-6■■■■□ 24
TSEN34-203ENST00000396388 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.41■■■□□ 2.146e-6■■■■■ 48.1
Retrieved 13 of 13 RNA–protein pairs in 3.1 ms