RNA–Protein interactions for RNA: ENST00000396247.7

RDH13-202, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-202ENST00000396247 NISCHQ9Y2I1 1504 aa37.92■■■■□ 3.66
RDH13-202ENST00000396247 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.87
RDH13-202ENST00000396247 ZCCHC6Q5VYS8 1495 aaKnown RBP31.87■■■□□ 2.69
RDH13-202ENST00000396247 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
RDH13-202ENST00000396247 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
RDH13-202ENST00000396247 SHROOM4Q9ULL8 1493 aa31.09■■■□□ 2.57
RDH13-202ENST00000396247 ABCC9O60706 1549 aa31.09■■■□□ 2.57
RDH13-202ENST00000396247 MYO15BQ96JP2 1530 aa30.89■■■□□ 2.54
RDH13-202ENST00000396247 NACADO15069 1562 aa30.68■■■□□ 2.5
RDH13-202ENST00000396247 RB1CC1Q8TDY2 1594 aa30.38■■■□□ 2.45
RDH13-202ENST00000396247 SCRIBQ14160 1630 aa30.37■■■□□ 2.45
RDH13-202ENST00000396247 SUPT5HO00267 1087 aaKnown RBP30.01■■■□□ 2.39
RDH13-202ENST00000396247 UNC13AQ9UPW8 1703 aa29.75■■■□□ 2.35
RDH13-202ENST00000396247 RSF1Q96T23 1441 aaPredicted RBP29.49■■■□□ 2.31
RDH13-202ENST00000396247 CECR2Q9BXF3 1484 aa29.46■■■□□ 2.31
RDH13-202ENST00000396247 BICRAQ9NZM4 1560 aa29.46■■■□□ 2.31
RDH13-202ENST00000396247 PABPN1Q86U42 306 aaKnown RBP eCLIP29.37■■■□□ 2.29
RDH13-202ENST00000396247 MROH2BQ7Z745 1585 aa29.31■■■□□ 2.28
RDH13-202ENST00000396247 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.27
RDH13-202ENST00000396247 SMARCA4P51532 1647 aa29.1■■■□□ 2.25
RDH13-202ENST00000396247 WIZO95785 1651 aa29.07■■■□□ 2.24
RDH13-202ENST00000396247 CHIC1Q5VXU3 224 aa28.79■■■□□ 2.2
RDH13-202ENST00000396247 TOP2AP11388 1531 aaKnown RBP28.77■■■□□ 2.2
RDH13-202ENST00000396247 PEG3Q9GZU2 1588 aa28.73■■■□□ 2.19
RDH13-202ENST00000396247 ATAD2BQ9ULI0 1458 aa28.6■■■□□ 2.17
RDH13-202ENST00000396247 SMARCA2P51531 1590 aa28.59■■■□□ 2.17
RDH13-202ENST00000396247 EIF4G1Q04637 1599 aaKnown RBP28.57■■■□□ 2.16
RDH13-202ENST00000396247 CCDC88BA6NC98 1476 aa28.49■■■□□ 2.15
RDH13-202ENST00000396247 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
RDH13-202ENST00000396247 NCAPD3P42695 1498 aa28.33■■■□□ 2.13
RDH13-202ENST00000396247 HMGXB3Q12766 1538 aa28.29■■■□□ 2.12
RDH13-202ENST00000396247 TRIM41Q8WV44 630 aa28.19■■■□□ 2.1
RDH13-202ENST00000396247 CC2D2AQ9P2K1 1620 aa28.11■■■□□ 2.09
RDH13-202ENST00000396247 ABCC8Q09428 1581 aa27.95■■■□□ 2.06
RDH13-202ENST00000396247 WRNQ14191 1432 aaPredicted RBP eCLIP27.76■■■□□ 2.03
RDH13-202ENST00000396247 CFTRP13569 1480 aa27.75■■■□□ 2.03
RDH13-202ENST00000396247 LOC105371045A0A1W2PR82 267 aa27.7■■■□□ 2.03
RDH13-202ENST00000396247 FAM9AQ8IZU1 332 aaPredicted RBP27.69■■■□□ 2.02
RDH13-202ENST00000396247 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
RDH13-202ENST00000396247 SYNJ1O43426 1573 aa27.62■■■□□ 2.01
RDH13-202ENST00000396247 PRDM2Q13029 1718 aa27.57■■■□□ 2
RDH13-202ENST00000396247 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
RDH13-202ENST00000396247 SOGA1O94964 1423 aa27.47■■□□□ 1.99
RDH13-202ENST00000396247 BIVM-ERCC5R4GMW8 1640 aa27.44■■□□□ 1.98
RDH13-202ENST00000396247 EEA1Q15075 1411 aa27.43■■□□□ 1.98
RDH13-202ENST00000396247 CUX1P39880 1505 aa27.39■■□□□ 1.98
RDH13-202ENST00000396247 DNAJC5BQ9UF47 199 aa27.39■■□□□ 1.97
RDH13-202ENST00000396247 RUSC2Q8N2Y8 1516 aa27.35■■□□□ 1.97
RDH13-202ENST00000396247 NESP48681 1621 aa27.34■■□□□ 1.97
RDH13-202ENST00000396247 LAMC3Q9Y6N6 1575 aa27.33■■□□□ 1.97
RDH13-202ENST00000396247 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
RDH13-202ENST00000396247 EHMT2Q96KQ7 1210 aa27.31■■□□□ 1.96
RDH13-202ENST00000396247 CSRNP3Q8WYN3 585 aa27.29■■□□□ 1.96
RDH13-202ENST00000396247 PDS5BQ9NTI5 1447 aa27.14■■□□□ 1.93
RDH13-202ENST00000396247 CEP164Q9UPV0 1460 aa27.13■■□□□ 1.93
RDH13-202ENST00000396247 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
RDH13-202ENST00000396247 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.92
RDH13-202ENST00000396247 GOLGA3Q08378 1498 aa27.07■■□□□ 1.92
RDH13-202ENST00000396247 KIF21BO75037 1637 aa27.05■■□□□ 1.92
RDH13-202ENST00000396247 KIF27Q86VH2 1401 aa27.04■■□□□ 1.92
RDH13-202ENST00000396247 TOPBP1Q92547 1522 aa27.04■■□□□ 1.92
RDH13-202ENST00000396247 TNIKQ9UKE5 1360 aa27.02■■□□□ 1.92
RDH13-202ENST00000396247 UBTFP17480 764 aaKnown RBP26.98■■□□□ 1.91
RDH13-202ENST00000396247 KIF21AQ7Z4S6 1674 aa26.98■■□□□ 1.91
RDH13-202ENST00000396247 URB2Q14146 1524 aaKnown RBP26.97■■□□□ 1.91
RDH13-202ENST00000396247 CUX2O14529 1486 aa26.94■■□□□ 1.9
RDH13-202ENST00000396247 POLA1P09884 1462 aaPredicted RBP26.93■■□□□ 1.9
RDH13-202ENST00000396247 RAPGEF2Q9Y4G8 1499 aa26.9■■□□□ 1.9
RDH13-202ENST00000396247 CEP162Q5TB80 1403 aa26.89■■□□□ 1.9
RDH13-202ENST00000396247 PRXQ9BXM0 1461 aa26.89■■□□□ 1.9
RDH13-202ENST00000396247 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
RDH13-202ENST00000396247 RAD54L2Q9Y4B4 1467 aa26.85■■□□□ 1.89
RDH13-202ENST00000396247 ABCA10Q8WWZ4 1543 aa26.83■■□□□ 1.89
RDH13-202ENST00000396247 IGF1RP08069 1367 aa26.79■■□□□ 1.88
RDH13-202ENST00000396247 MRC2Q9UBG0 1479 aa26.77■■□□□ 1.88
RDH13-202ENST00000396247 WDR97A6NE52 1622 aa26.7■■□□□ 1.86
RDH13-202ENST00000396247 CLIP1P30622 1438 aa26.66■■□□□ 1.86
RDH13-202ENST00000396247 CARMIL1Q5VZK9 1371 aa26.66■■□□□ 1.86
RDH13-202ENST00000396247 ERCC6Q03468 1493 aa26.64■■□□□ 1.86
RDH13-202ENST00000396247 WDR62O43379 1518 aa26.61■■□□□ 1.85
RDH13-202ENST00000396247 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
RDH13-202ENST00000396247 PCGF6Q9BYE7 350 aa26.6■■□□□ 1.85
RDH13-202ENST00000396247 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.85
RDH13-202ENST00000396247 ABCA5Q8WWZ7 1642 aa26.58■■□□□ 1.85
RDH13-202ENST00000396247 TRIM26Q12899 539 aaPredicted RBP26.55■■□□□ 1.84
RDH13-202ENST00000396247 GAPVD1Q14C86 1478 aa26.55■■□□□ 1.84
RDH13-202ENST00000396247 CUL7Q14999 1698 aa26.54■■□□□ 1.84
RDH13-202ENST00000396247 HRCP23327 699 aa26.53■■□□□ 1.84
RDH13-202ENST00000396247 RANGAP1P46060 587 aaPredicted RBP26.51■■□□□ 1.83
RDH13-202ENST00000396247 THOC2Q8NI27 1593 aaKnown RBP26.49■■□□□ 1.83
RDH13-202ENST00000396247 IFT140Q96RY7 1462 aa26.47■■□□□ 1.83
RDH13-202ENST00000396247 VPS8Q8N3P4 1428 aa26.43■■□□□ 1.82
RDH13-202ENST00000396247 PPARGC1BQ86YN6 1023 aaKnown RBP26.4■■□□□ 1.82
RDH13-202ENST00000396247 AQRO60306 1485 aaKnown RBP eCLIP26.38■■□□□ 1.811e-9■■■■■ 45.4
RDH13-202ENST00000396247 ARAP1Q96P48 1450 aa26.36■■□□□ 1.81
RDH13-202ENST00000396247 PBRM1Q86U86 1689 aa26.35■■□□□ 1.81
RDH13-202ENST00000396247 ZNF608Q9ULD9 1512 aaPredicted RBP26.33■■□□□ 1.81
RDH13-202ENST00000396247 ARHGAP35Q9NRY4 1499 aa26.32■■□□□ 1.8
RDH13-202ENST00000396247 GRIN2BQ13224 1484 aa26.32■■□□□ 1.8
RDH13-202ENST00000396247 FHAD1B1AJZ9 1412 aa26.26■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms