RNA–Protein interactions for RNA: ENST00000395810.5

RASGEF1A-204, Transcript of RasGEF domain family member 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RASGEF1A, Length 3,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1A-204ENST00000395810 NISCHQ9Y2I1 1504 aa33.67■■■□□ 2.98
RASGEF1A-204ENST00000395810 CCDC180Q9P1Z9 1646 aa29.06■■■□□ 2.24
RASGEF1A-204ENST00000395810 DCAF8L2P0C7V8 631 aa28.52■■■□□ 2.16
RASGEF1A-204ENST00000395810 ZCCHC6Q5VYS8 1495 aaKnown RBP28.26■■■□□ 2.11
RASGEF1A-204ENST00000395810 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
RASGEF1A-204ENST00000395810 ABCC9O60706 1549 aa27.91■■■□□ 2.06
RASGEF1A-204ENST00000395810 DCAF1Q9Y4B6 1507 aa27.58■■■□□ 2.01
RASGEF1A-204ENST00000395810 SUPT5HO00267 1087 aaKnown RBP27.21■■□□□ 1.95
RASGEF1A-204ENST00000395810 SCRIBQ14160 1630 aa27.16■■□□□ 1.94
RASGEF1A-204ENST00000395810 NACADO15069 1562 aa27.15■■□□□ 1.94
RASGEF1A-204ENST00000395810 MYO15BQ96JP2 1530 aa27.14■■□□□ 1.94
RASGEF1A-204ENST00000395810 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
RASGEF1A-204ENST00000395810 PABPN1Q86U42 306 aaKnown RBP eCLIP26.51■■□□□ 1.83
RASGEF1A-204ENST00000395810 UNC13AQ9UPW8 1703 aa26.36■■□□□ 1.81
RASGEF1A-204ENST00000395810 CECR2Q9BXF3 1484 aa26.32■■□□□ 1.8
RASGEF1A-204ENST00000395810 RSF1Q96T23 1441 aaPredicted RBP26.27■■□□□ 1.8
RASGEF1A-204ENST00000395810 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
RASGEF1A-204ENST00000395810 BICRAQ9NZM4 1560 aa26.11■■□□□ 1.77
RASGEF1A-204ENST00000395810 BAZ1AQ9NRL2 1556 aaPredicted RBP25.98■■□□□ 1.75
RASGEF1A-204ENST00000395810 WIZO95785 1651 aa25.92■■□□□ 1.74
RASGEF1A-204ENST00000395810 SMARCA4P51532 1647 aa25.84■■□□□ 1.73
RASGEF1A-204ENST00000395810 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
RASGEF1A-204ENST00000395810 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
RASGEF1A-204ENST00000395810 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.66
RASGEF1A-204ENST00000395810 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
RASGEF1A-204ENST00000395810 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
RASGEF1A-204ENST00000395810 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
RASGEF1A-204ENST00000395810 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
RASGEF1A-204ENST00000395810 SMARCA2P51531 1590 aa25.37■■□□□ 1.65
RASGEF1A-204ENST00000395810 PEG3Q9GZU2 1588 aa25.32■■□□□ 1.64
RASGEF1A-204ENST00000395810 FAM9AQ8IZU1 332 aaPredicted RBP25.21■■□□□ 1.63
RASGEF1A-204ENST00000395810 NCAPD3P42695 1498 aa25.1■■□□□ 1.61
RASGEF1A-204ENST00000395810 EHMT2Q96KQ7 1210 aa25.07■■□□□ 1.6
RASGEF1A-204ENST00000395810 LOC105371045A0A1W2PR82 267 aa25.06■■□□□ 1.6
RASGEF1A-204ENST00000395810 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
RASGEF1A-204ENST00000395810 ABCC8Q09428 1581 aa25.03■■□□□ 1.6
RASGEF1A-204ENST00000395810 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
RASGEF1A-204ENST00000395810 WRNQ14191 1432 aaPredicted RBP eCLIP24.79■■□□□ 1.56
RASGEF1A-204ENST00000395810 DNAJC5BQ9UF47 199 aa24.67■■□□□ 1.54
RASGEF1A-204ENST00000395810 CFTRP13569 1480 aa24.63■■□□□ 1.53
RASGEF1A-204ENST00000395810 CADPSQ9ULU8 1353 aa24.62■■□□□ 1.53
RASGEF1A-204ENST00000395810 SOGA1O94964 1423 aa24.61■■□□□ 1.53
RASGEF1A-204ENST00000395810 SYNJ1O43426 1573 aa24.61■■□□□ 1.53
RASGEF1A-204ENST00000395810 RUSC2Q8N2Y8 1516 aa24.5■■□□□ 1.51
RASGEF1A-204ENST00000395810 NESP48681 1621 aa24.49■■□□□ 1.51
RASGEF1A-204ENST00000395810 CSRNP3Q8WYN3 585 aa24.46■■□□□ 1.51
RASGEF1A-204ENST00000395810 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
RASGEF1A-204ENST00000395810 TOP2BQ02880 1626 aa24.39■■□□□ 1.49
RASGEF1A-204ENST00000395810 CUX1P39880 1505 aa24.38■■□□□ 1.49
RASGEF1A-204ENST00000395810 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
RASGEF1A-204ENST00000395810 EEA1Q15075 1411 aa24.35■■□□□ 1.49
RASGEF1A-204ENST00000395810 PRDM2Q13029 1718 aa24.31■■□□□ 1.48
RASGEF1A-204ENST00000395810 BIVM-ERCC5R4GMW8 1640 aa24.28■■□□□ 1.48
RASGEF1A-204ENST00000395810 RANGAP1P46060 587 aaPredicted RBP24.25■■□□□ 1.47
RASGEF1A-204ENST00000395810 LAMC3Q9Y6N6 1575 aa24.22■■□□□ 1.47
RASGEF1A-204ENST00000395810 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
RASGEF1A-204ENST00000395810 PDS5BQ9NTI5 1447 aa24.19■■□□□ 1.46
RASGEF1A-204ENST00000395810 FGD5Q6ZNL6 1462 aa24.17■■□□□ 1.46
RASGEF1A-204ENST00000395810 GOLGA3Q08378 1498 aa24.15■■□□□ 1.46
RASGEF1A-204ENST00000395810 KIF27Q86VH2 1401 aa24.15■■□□□ 1.46
RASGEF1A-204ENST00000395810 PCGF6Q9BYE7 350 aa24.13■■□□□ 1.45
RASGEF1A-204ENST00000395810 CUX2O14529 1486 aa24.13■■□□□ 1.45
RASGEF1A-204ENST00000395810 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
RASGEF1A-204ENST00000395810 TOPBP1Q92547 1522 aa24.08■■□□□ 1.45
RASGEF1A-204ENST00000395810 TNIKQ9UKE5 1360 aa24.07■■□□□ 1.44
RASGEF1A-204ENST00000395810 CEP162Q5TB80 1403 aa24.07■■□□□ 1.44
RASGEF1A-204ENST00000395810 RAPGEF2Q9Y4G8 1499 aa24.06■■□□□ 1.44
RASGEF1A-204ENST00000395810 DNMBPQ6XZF7 1577 aa24.05■■□□□ 1.44
RASGEF1A-204ENST00000395810 RAD54L2Q9Y4B4 1467 aa24.05■■□□□ 1.44
RASGEF1A-204ENST00000395810 URB2Q14146 1524 aaKnown RBP24.02■■□□□ 1.44
RASGEF1A-204ENST00000395810 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
RASGEF1A-204ENST00000395810 TTBK1Q5TCY1 1321 aaPredicted RBP24■■□□□ 1.43
RASGEF1A-204ENST00000395810 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
RASGEF1A-204ENST00000395810 KIF21BO75037 1637 aa23.98■■□□□ 1.43
RASGEF1A-204ENST00000395810 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
RASGEF1A-204ENST00000395810 IGF1RP08069 1367 aa23.89■■□□□ 1.42
RASGEF1A-204ENST00000395810 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.42
RASGEF1A-204ENST00000395810 PRXQ9BXM0 1461 aa23.88■■□□□ 1.41
RASGEF1A-204ENST00000395810 CLIP1P30622 1438 aa23.87■■□□□ 1.41
RASGEF1A-204ENST00000395810 CARMIL1Q5VZK9 1371 aa23.85■■□□□ 1.41
RASGEF1A-204ENST00000395810 TRIM26Q12899 539 aaPredicted RBP23.85■■□□□ 1.41
RASGEF1A-204ENST00000395810 MRC2Q9UBG0 1479 aa23.82■■□□□ 1.4
RASGEF1A-204ENST00000395810 ABCA10Q8WWZ4 1543 aa23.82■■□□□ 1.4
RASGEF1A-204ENST00000395810 ERICH3Q5RHP9 1530 aa23.79■■□□□ 1.4
RASGEF1A-204ENST00000395810 APLP2Q06481 763 aa23.71■■□□□ 1.39
RASGEF1A-204ENST00000395810 GAPVD1Q14C86 1478 aa23.7■■□□□ 1.38
RASGEF1A-204ENST00000395810 AQRO60306 1485 aaKnown RBP eCLIP23.66■■□□□ 1.386e-7■■■■□ 21.4
RASGEF1A-204ENST00000395810 P3H3Q8IVL6 736 aa23.63■■□□□ 1.37
RASGEF1A-204ENST00000395810 WDR97A6NE52 1622 aa23.58■■□□□ 1.37
RASGEF1A-204ENST00000395810 VPS8Q8N3P4 1428 aa23.58■■□□□ 1.37
RASGEF1A-204ENST00000395810 TARBP1Q13395 1621 aaKnown RBP23.58■■□□□ 1.37
RASGEF1A-204ENST00000395810 WDR62O43379 1518 aa23.58■■□□□ 1.36
RASGEF1A-204ENST00000395810 ZNF608Q9ULD9 1512 aaPredicted RBP23.55■■□□□ 1.36
RASGEF1A-204ENST00000395810 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
RASGEF1A-204ENST00000395810 ATP1B4Q9UN42 357 aaPredicted RBP23.54■■□□□ 1.36
RASGEF1A-204ENST00000395810 IFT140Q96RY7 1462 aa23.53■■□□□ 1.36
RASGEF1A-204ENST00000395810 PELP1Q8IZL8 1130 aaKnown RBP23.53■■□□□ 1.36
RASGEF1A-204ENST00000395810 CUL7Q14999 1698 aa23.52■■□□□ 1.36
RASGEF1A-204ENST00000395810 ARAP1Q96P48 1450 aa23.5■■□□□ 1.35
RASGEF1A-204ENST00000395810 FBLN2P98095 1184 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 388.9 ms