RNA–Protein interactions for RNA: ENST00000395445.5

PCDH15-213, Transcript of protocadherin related 15, humanhuman

TSL 1 (best) BASIC

Gene PCDH15, Length 5,917 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-213ENST00000395445 DCAF8L2P0C7V8 631 aa11.56□□□□□ -0.56
PCDH15-213ENST00000395445 PELP1Q8IZL8 1130 aaKnown RBP11.25□□□□□ -0.61
PCDH15-213ENST00000395445 ERICH6Q7L0X2 663 aa10.92□□□□□ -0.66
PCDH15-213ENST00000395445 FAM9AQ8IZU1 332 aaPredicted RBP10.83□□□□□ -0.68
PCDH15-213ENST00000395445 EHMT2Q96KQ7 1210 aa10.82□□□□□ -0.68
PCDH15-213ENST00000395445 MYT1Q01538 1121 aa10.76□□□□□ -0.69
PCDH15-213ENST00000395445 CCER1Q8TC90 406 aaPredicted RBP10.75□□□□□ -0.69
PCDH15-213ENST00000395445 APLP2Q06481 763 aa10.74□□□□□ -0.69
PCDH15-213ENST00000395445 SUPT5HO00267 1087 aaKnown RBP10.65□□□□□ -0.7
PCDH15-213ENST00000395445 NISCHQ9Y2I1 1504 aa10.55□□□□□ -0.72
PCDH15-213ENST00000395445 TTBK1Q5TCY1 1321 aaPredicted RBP10.47□□□□□ -0.73
PCDH15-213ENST00000395445 HRCP23327 699 aa10.43□□□□□ -0.74
PCDH15-213ENST00000395445 ATP1B4Q9UN42 357 aaPredicted RBP10.41□□□□□ -0.74
PCDH15-213ENST00000395445 NEFLP07196 543 aa10.38□□□□□ -0.75
PCDH15-213ENST00000395445 DAXXQ9UER7 740 aaPredicted RBP10.37□□□□□ -0.75
PCDH15-213ENST00000395445 RANGAP1P46060 587 aaPredicted RBP10.35□□□□□ -0.75
PCDH15-213ENST00000395445 CENPBP07199 599 aaPredicted RBP10.34□□□□□ -0.75
PCDH15-213ENST00000395445 MYT1LQ9UL68 1186 aa10.28□□□□□ -0.76
PCDH15-213ENST00000395445 SHROOM4Q9ULL8 1493 aa10.28□□□□□ -0.76
PCDH15-213ENST00000395445 PPARGC1BQ86YN6 1023 aaKnown RBP10.26□□□□□ -0.77
PCDH15-213ENST00000395445 PCGF6Q9BYE7 350 aa10.25□□□□□ -0.77
PCDH15-213ENST00000395445 YTHDC1Q96MU7 727 aaKnown RBP10.23□□□□□ -0.77
PCDH15-213ENST00000395445 CHIC1Q5VXU3 224 aa10.14□□□□□ -0.79
PCDH15-213ENST00000395445 POLR3GLQ9BT43 218 aa10.14□□□□□ -0.79
PCDH15-213ENST00000395445 SLC4A1APQ9BWU0 796 aaKnown RBP10.12□□□□□ -0.79
PCDH15-213ENST00000395445 ZNF316A6NFI3 1004 aaPredicted RBP10.08□□□□□ -0.8
PCDH15-213ENST00000395445 SCAF1Q9H7N4 1312 aaKnown RBP10.06□□□□□ -0.8
PCDH15-213ENST00000395445 CLSPNQ9HAW4 1339 aa10.02□□□□□ -0.81
PCDH15-213ENST00000395445 ZEB1P37275 1124 aaPredicted RBP10□□□□□ -0.81
PCDH15-213ENST00000395445 CNGB1Q14028 1251 aaPredicted RBP9.99□□□□□ -0.81
PCDH15-213ENST00000395445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.98□□□□□ -0.81
PCDH15-213ENST00000395445 HNRNPUL2Q1KMD3 747 aaKnown RBP9.98□□□□□ -0.81
PCDH15-213ENST00000395445 RTL5Q5HYW3 569 aaPredicted RBP9.95□□□□□ -0.82
PCDH15-213ENST00000395445 UBTFP17480 764 aaKnown RBP9.95□□□□□ -0.82
PCDH15-213ENST00000395445 SLC24A1O60721 1099 aa9.9□□□□□ -0.83
PCDH15-213ENST00000395445 ZBTB47Q9UFB7 747 aaPredicted RBP9.9□□□□□ -0.83
PCDH15-213ENST00000395445 GTF3C3Q9Y5Q9 886 aa9.86□□□□□ -0.83
PCDH15-213ENST00000395445 ACIN1Q9UKV3 1341 aaKnown RBP9.82□□□□□ -0.84
PCDH15-213ENST00000395445 TRIM41Q8WV44 630 aa9.81□□□□□ -0.84
PCDH15-213ENST00000395445 ITGAEP38570 1179 aa9.81□□□□□ -0.84
PCDH15-213ENST00000395445 BCL11AQ9H165 835 aa9.81□□□□□ -0.84
PCDH15-213ENST00000395445 BCANQ96GW7 911 aa9.72□□□□□ -0.85
PCDH15-213ENST00000395445 NEUROD1Q13562 356 aa9.71□□□□□ -0.86
PCDH15-213ENST00000395445 TRIM26Q12899 539 aaPredicted RBP9.69□□□□□ -0.86
PCDH15-213ENST00000395445 CANXP27824 592 aaKnown RBP9.68□□□□□ -0.86
PCDH15-213ENST00000395445 PRKCSHP14314 528 aaPredicted RBP9.65□□□□□ -0.87
PCDH15-213ENST00000395445 NEFMP07197 916 aa9.64□□□□□ -0.87
PCDH15-213ENST00000395445 CDK11BP21127 795 aaKnown RBP9.64□□□□□ -0.87
PCDH15-213ENST00000395445 CDK11AQ9UQ88 783 aaPredicted RBP9.64□□□□□ -0.87
PCDH15-213ENST00000395445 ANP32BQ92688 251 aaKnown RBP9.58□□□□□ -0.88
PCDH15-213ENST00000395445 TRIM52Q96A61 297 aa9.56□□□□□ -0.88
PCDH15-213ENST00000395445 DIEXFQ68CQ4 756 aaKnown RBP9.54□□□□□ -0.88
PCDH15-213ENST00000395445 ANP32EQ9BTT0 268 aa9.54□□□□□ -0.88
PCDH15-213ENST00000395445 ZNF326Q5BKZ1 582 aaKnown RBP9.52□□□□□ -0.89
PCDH15-213ENST00000395445 PLPPR3Q6T4P5 718 aa9.49□□□□□ -0.89
PCDH15-213ENST00000395445 HSP90AA1P07900 732 aaKnown RBP9.49□□□□□ -0.89
PCDH15-213ENST00000395445 FAM50AQ14320 339 aaKnown RBP9.47□□□□□ -0.89
PCDH15-213ENST00000395445 A0A0G2JS52 829 aa9.46□□□□□ -0.89
PCDH15-213ENST00000395445 EIF5BO60841 1220 aaKnown RBP9.46□□□□□ -0.9
PCDH15-213ENST00000395445 ESF1Q9H501 851 aaKnown RBP9.45□□□□□ -0.9
PCDH15-213ENST00000395445 LOC105371045A0A1W2PR82 267 aa9.44□□□□□ -0.9
PCDH15-213ENST00000395445 TULP1O00294 542 aaPredicted RBP9.44□□□□□ -0.9
PCDH15-213ENST00000395445 NPM2Q86SE8 214 aaKnown RBP9.42□□□□□ -0.9
PCDH15-213ENST00000395445 GLIPR1L2Q4G1C9 344 aa9.41□□□□□ -0.9
PCDH15-213ENST00000395445 ANP32AP39687 249 aaKnown RBP9.4□□□□□ -0.9
PCDH15-213ENST00000395445 CSRNP3Q8WYN3 585 aa9.4□□□□□ -0.91
PCDH15-213ENST00000395445 ANP32CO43423 234 aa9.38□□□□□ -0.91
PCDH15-213ENST00000395445 STAG3Q9UJ98 1225 aa9.38□□□□□ -0.91
PCDH15-213ENST00000395445 NCBP3Q53F19 620 aaKnown RBP9.37□□□□□ -0.91
PCDH15-213ENST00000395445 DCAF1Q9Y4B6 1507 aa9.36□□□□□ -0.91
PCDH15-213ENST00000395445 MYO15BQ96JP2 1530 aa9.35□□□□□ -0.91
PCDH15-213ENST00000395445 UPF2Q9HAU5 1272 aaKnown RBP9.34□□□□□ -0.91
PCDH15-213ENST00000395445 FBLN2P98095 1184 aa9.34□□□□□ -0.91
PCDH15-213ENST00000395445 ZBTB7CA1YPR0 619 aa9.3□□□□□ -0.92
PCDH15-213ENST00000395445 ARXQ96QS3 562 aa9.29□□□□□ -0.92
PCDH15-213ENST00000395445 ABCC9O60706 1549 aa9.29□□□□□ -0.92
PCDH15-213ENST00000395445 CHGAP10645 457 aaKnown RBP9.29□□□□□ -0.92
PCDH15-213ENST00000395445 CCDC180Q9P1Z9 1646 aa9.26□□□□□ -0.93
PCDH15-213ENST00000395445 PLEKHG5O94827 1062 aa9.24□□□□□ -0.93
PCDH15-213ENST00000395445 CLSTN1O94985 981 aa9.23□□□□□ -0.93
PCDH15-213ENST00000395445 NCLP19338 710 aaKnown RBP9.22□□□□□ -0.93
PCDH15-213ENST00000395445 ZRSR1Q15695 479 aaKnown RBP9.21□□□□□ -0.93
PCDH15-213ENST00000395445 MYH16Q9H6N6 1097 aa9.21□□□□□ -0.94
PCDH15-213ENST00000395445 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.94
PCDH15-213ENST00000395445 HAP1P54257 671 aaPredicted RBP9.2□□□□□ -0.94
PCDH15-213ENST00000395445 TRIM44Q96DX7 344 aaPredicted RBP9.2□□□□□ -0.94
PCDH15-213ENST00000395445 NPHP1O15259 732 aa9.19□□□□□ -0.94
PCDH15-213ENST00000395445 C14orf37Q86TY3 774 aa9.19□□□□□ -0.94
PCDH15-213ENST00000395445 ZNF777Q9ULD5 760 aaPredicted RBP9.19□□□□□ -0.94
PCDH15-213ENST00000395445 TSHZ2Q9NRE2 1034 aa9.18□□□□□ -0.94
PCDH15-213ENST00000395445 ARID3CA6NKF2 412 aa9.18□□□□□ -0.94
PCDH15-213ENST00000395445 TNNT2P45379 298 aaPredicted RBP9.18□□□□□ -0.94
PCDH15-213ENST00000395445 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.15□□□□□ -0.94
PCDH15-213ENST00000395445 SUPT16HQ9Y5B9 1047 aaKnown RBP9.15□□□□□ -0.94
PCDH15-213ENST00000395445 ANO8Q9HCE9 1232 aaPredicted RBP9.14□□□□□ -0.95
PCDH15-213ENST00000395445 TPRNQ4KMQ1 711 aa9.14□□□□□ -0.95
PCDH15-213ENST00000395445 TAOK2Q9UL54 1235 aa9.14□□□□□ -0.95
PCDH15-213ENST00000395445 MIER1Q8N108 512 aa9.13□□□□□ -0.95
PCDH15-213ENST00000395445 PTMAP06454 111 aaKnown RBP9.12□□□□□ -0.95
PCDH15-213ENST00000395445 NPM1P06748 294 aaKnown RBP eCLIP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms