RNA–Protein interactions for RNA: ENST00000395105.8

STRA6-202, Transcript of stimulated by retinoic acid 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STRA6, Length 2,800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-202ENST00000395105 NISCHQ9Y2I1 1504 aa27.66■■■□□ 2.02
STRA6-202ENST00000395105 PELP1Q8IZL8 1130 aaKnown RBP23.74■■□□□ 1.39
STRA6-202ENST00000395105 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
STRA6-202ENST00000395105 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
STRA6-202ENST00000395105 ZCCHC6Q5VYS8 1495 aaKnown RBP23.33■■□□□ 1.33
STRA6-202ENST00000395105 MYT1Q01538 1121 aa23.23■■□□□ 1.31
STRA6-202ENST00000395105 DCAF8L2P0C7V8 631 aa23.07■■□□□ 1.28
STRA6-202ENST00000395105 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
STRA6-202ENST00000395105 DCAF1Q9Y4B6 1507 aa22.63■■□□□ 1.21
STRA6-202ENST00000395105 ABCC9O60706 1549 aa22.56■■□□□ 1.2
STRA6-202ENST00000395105 HRCP23327 699 aa22.48■■□□□ 1.19
STRA6-202ENST00000395105 TTBK1Q5TCY1 1321 aaPredicted RBP22.23■■□□□ 1.15
STRA6-202ENST00000395105 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
STRA6-202ENST00000395105 MYO15BQ96JP2 1530 aa22.17■■□□□ 1.14
STRA6-202ENST00000395105 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
STRA6-202ENST00000395105 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
STRA6-202ENST00000395105 NACADO15069 1562 aa21.97■■□□□ 1.11
STRA6-202ENST00000395105 PPARGC1BQ86YN6 1023 aaKnown RBP21.93■■□□□ 1.1
STRA6-202ENST00000395105 PRKCSHP14314 528 aaPredicted RBP21.8■■□□□ 1.08
STRA6-202ENST00000395105 RSF1Q96T23 1441 aaPredicted RBP21.78■■□□□ 1.08
STRA6-202ENST00000395105 RB1CC1Q8TDY2 1594 aa21.72■■□□□ 1.07
STRA6-202ENST00000395105 CECR2Q9BXF3 1484 aa21.66■■□□□ 1.06
STRA6-202ENST00000395105 BCL11AQ9H165 835 aa21.54■■□□□ 1.04
STRA6-202ENST00000395105 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
STRA6-202ENST00000395105 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
STRA6-202ENST00000395105 WIZO95785 1651 aa21.44■■□□□ 1.02
STRA6-202ENST00000395105 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
STRA6-202ENST00000395105 LOC105371045A0A1W2PR82 267 aa21.4■■□□□ 1.02
STRA6-202ENST00000395105 PCGF6Q9BYE7 350 aa21.33■■□□□ 1.01
STRA6-202ENST00000395105 FAM9AQ8IZU1 332 aaPredicted RBP21.32■■□□□ 1
STRA6-202ENST00000395105 ERICH6Q7L0X2 663 aa21.24■□□□□ 0.99
STRA6-202ENST00000395105 BAZ1AQ9NRL2 1556 aaPredicted RBP21.24■□□□□ 0.99
STRA6-202ENST00000395105 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
STRA6-202ENST00000395105 BICRAQ9NZM4 1560 aa21.17■□□□□ 0.98
STRA6-202ENST00000395105 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
STRA6-202ENST00000395105 APLP2Q06481 763 aa21.14■□□□□ 0.98
STRA6-202ENST00000395105 ACIN1Q9UKV3 1341 aaKnown RBP21.06■□□□□ 0.96
STRA6-202ENST00000395105 CENPBP07199 599 aaPredicted RBP21.06■□□□□ 0.96
STRA6-202ENST00000395105 TOP2AP11388 1531 aaKnown RBP21.01■□□□□ 0.95
STRA6-202ENST00000395105 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
STRA6-202ENST00000395105 EIF4G1Q04637 1599 aaKnown RBP20.98■□□□□ 0.95
STRA6-202ENST00000395105 CCDC88BA6NC98 1476 aa20.95■□□□□ 0.94
STRA6-202ENST00000395105 GTF3C3Q9Y5Q9 886 aa20.95■□□□□ 0.94
STRA6-202ENST00000395105 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
STRA6-202ENST00000395105 NEUROD1Q13562 356 aa20.92■□□□□ 0.94
STRA6-202ENST00000395105 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
STRA6-202ENST00000395105 PEG3Q9GZU2 1588 aa20.72■□□□□ 0.91
STRA6-202ENST00000395105 ZEB1P37275 1124 aaPredicted RBP20.68■□□□□ 0.9
STRA6-202ENST00000395105 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
STRA6-202ENST00000395105 ANP32EQ9BTT0 268 aa20.63■□□□□ 0.89
STRA6-202ENST00000395105 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
STRA6-202ENST00000395105 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.88
STRA6-202ENST00000395105 SOGA1O94964 1423 aa20.56■□□□□ 0.88
STRA6-202ENST00000395105 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.88
STRA6-202ENST00000395105 SLC24A1O60721 1099 aa20.51■□□□□ 0.87
STRA6-202ENST00000395105 CSRNP3Q8WYN3 585 aa20.45■□□□□ 0.86
STRA6-202ENST00000395105 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.86
STRA6-202ENST00000395105 SYNJ1O43426 1573 aa20.42■□□□□ 0.86
STRA6-202ENST00000395105 NCAPD3P42695 1498 aa20.32■□□□□ 0.84
STRA6-202ENST00000395105 HMGXB3Q12766 1538 aa20.3■□□□□ 0.84
STRA6-202ENST00000395105 CEP162Q5TB80 1403 aa20.27■□□□□ 0.84
STRA6-202ENST00000395105 EEA1Q15075 1411 aa20.26■□□□□ 0.83
STRA6-202ENST00000395105 UBTFP17480 764 aaKnown RBP20.26■□□□□ 0.83
STRA6-202ENST00000395105 TNIKQ9UKE5 1360 aa20.23■□□□□ 0.83
STRA6-202ENST00000395105 CC2D2AQ9P2K1 1620 aa20.22■□□□□ 0.83
STRA6-202ENST00000395105 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
STRA6-202ENST00000395105 GOLGA3Q08378 1498 aa20.17■□□□□ 0.82
STRA6-202ENST00000395105 TOP2BQ02880 1626 aa20.15■□□□□ 0.82
STRA6-202ENST00000395105 BIVM-ERCC5R4GMW8 1640 aa20.09■□□□□ 0.81
STRA6-202ENST00000395105 CEP164Q9UPV0 1460 aa20.08■□□□□ 0.81
STRA6-202ENST00000395105 KIF21BO75037 1637 aa20.08■□□□□ 0.81
STRA6-202ENST00000395105 RAPGEF2Q9Y4G8 1499 aa20.06■□□□□ 0.8
STRA6-202ENST00000395105 CUX1P39880 1505 aa20.06■□□□□ 0.8
STRA6-202ENST00000395105 CFTRP13569 1480 aa20.05■□□□□ 0.8
STRA6-202ENST00000395105 ANO8Q9HCE9 1232 aaPredicted RBP20.04■□□□□ 0.8
STRA6-202ENST00000395105 RANGAP1P46060 587 aaPredicted RBP20.03■□□□□ 0.8
STRA6-202ENST00000395105 EIF5BO60841 1220 aaKnown RBP19.96■□□□□ 0.79
STRA6-202ENST00000395105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.95■□□□□ 0.78
STRA6-202ENST00000395105 DIEXFQ68CQ4 756 aaKnown RBP19.95■□□□□ 0.78
STRA6-202ENST00000395105 CLIP1P30622 1438 aa19.95■□□□□ 0.78
STRA6-202ENST00000395105 PRDM2Q13029 1718 aa19.91■□□□□ 0.78
STRA6-202ENST00000395105 TSHZ2Q9NRE2 1034 aa19.91■□□□□ 0.78
STRA6-202ENST00000395105 CADPSQ9ULU8 1353 aa19.88■□□□□ 0.77
STRA6-202ENST00000395105 DAXXQ9UER7 740 aaPredicted RBP19.88■□□□□ 0.77
STRA6-202ENST00000395105 UBE2Q2Q8WVN8 375 aa19.87■□□□□ 0.77
STRA6-202ENST00000395105 PRXQ9BXM0 1461 aa19.86■□□□□ 0.77
STRA6-202ENST00000395105 KIF27Q86VH2 1401 aa19.82■□□□□ 0.76
STRA6-202ENST00000395105 VPS8Q8N3P4 1428 aa19.81■□□□□ 0.76
STRA6-202ENST00000395105 CCER1Q8TC90 406 aaPredicted RBP19.8■□□□□ 0.76
STRA6-202ENST00000395105 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
STRA6-202ENST00000395105 ERICH3Q5RHP9 1530 aa19.79■□□□□ 0.76
STRA6-202ENST00000395105 NESP48681 1621 aa19.75■□□□□ 0.75
STRA6-202ENST00000395105 CUX2O14529 1486 aa19.74■□□□□ 0.75
STRA6-202ENST00000395105 FGD5Q6ZNL6 1462 aa19.74■□□□□ 0.75
STRA6-202ENST00000395105 FANCD2Q9BXW9 1451 aa19.71■□□□□ 0.75
STRA6-202ENST00000395105 ARAP1Q96P48 1450 aa19.71■□□□□ 0.75
STRA6-202ENST00000395105 IGF1RP08069 1367 aa19.67■□□□□ 0.74
STRA6-202ENST00000395105 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
STRA6-202ENST00000395105 SALL2Q9Y467 1007 aaPredicted RBP19.64■□□□□ 0.73
STRA6-202ENST00000395105 SUPT16HQ9Y5B9 1047 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms