RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 NISCHQ9Y2I1 1504 aa22.22■■□□□ 1.15
R3HDM2-203ENST00000393811 SHROOM4Q9ULL8 1493 aa20.17■□□□□ 0.82
R3HDM2-203ENST00000393811 SUPT5HO00267 1087 aaKnown RBP20.12■□□□□ 0.81
R3HDM2-203ENST00000393811 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
R3HDM2-203ENST00000393811 PCGF6Q9BYE7 350 aa19.49■□□□□ 0.71
R3HDM2-203ENST00000393811 HRCP23327 699 aa19.41■□□□□ 0.7
R3HDM2-203ENST00000393811 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
R3HDM2-203ENST00000393811 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
R3HDM2-203ENST00000393811 LOC105371045A0A1W2PR82 267 aa18.97■□□□□ 0.63
R3HDM2-203ENST00000393811 MYO15BQ96JP2 1530 aa18.96■□□□□ 0.63
R3HDM2-203ENST00000393811 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.61
R3HDM2-203ENST00000393811 TRIM26Q12899 539 aaPredicted RBP18.75■□□□□ 0.59
R3HDM2-203ENST00000393811 ZCCHC6Q5VYS8 1495 aaKnown RBP18.75■□□□□ 0.59
R3HDM2-203ENST00000393811 FAM9AQ8IZU1 332 aaPredicted RBP18.72■□□□□ 0.59
R3HDM2-203ENST00000393811 ZEB1P37275 1124 aaPredicted RBP18.58■□□□□ 0.56
R3HDM2-203ENST00000393811 TRIM41Q8WV44 630 aa18.55■□□□□ 0.56
R3HDM2-203ENST00000393811 DCAF1Q9Y4B6 1507 aa18.51■□□□□ 0.55
R3HDM2-203ENST00000393811 PELP1Q8IZL8 1130 aaKnown RBP18.44■□□□□ 0.54
R3HDM2-203ENST00000393811 CCDC180Q9P1Z9 1646 aa18.32■□□□□ 0.52
R3HDM2-203ENST00000393811 TTBK1Q5TCY1 1321 aaPredicted RBP18.29■□□□□ 0.52
R3HDM2-203ENST00000393811 CCER1Q8TC90 406 aaPredicted RBP18.27■□□□□ 0.52
R3HDM2-203ENST00000393811 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
R3HDM2-203ENST00000393811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.15■□□□□ 0.5
R3HDM2-203ENST00000393811 CENPBP07199 599 aaPredicted RBP18.08■□□□□ 0.48
R3HDM2-203ENST00000393811 DIEXFQ68CQ4 756 aaKnown RBP17.95■□□□□ 0.46
R3HDM2-203ENST00000393811 ACIN1Q9UKV3 1341 aaKnown RBP17.94■□□□□ 0.46
R3HDM2-203ENST00000393811 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
R3HDM2-203ENST00000393811 GTF3C3Q9Y5Q9 886 aa17.92■□□□□ 0.46
R3HDM2-203ENST00000393811 NEUROD1Q13562 356 aa17.89■□□□□ 0.46
R3HDM2-203ENST00000393811 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
R3HDM2-203ENST00000393811 ABCC9O60706 1549 aa17.86■□□□□ 0.45
R3HDM2-203ENST00000393811 SCRIBQ14160 1630 aa17.84■□□□□ 0.45
R3HDM2-203ENST00000393811 UBTFP17480 764 aaKnown RBP17.8■□□□□ 0.44
R3HDM2-203ENST00000393811 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
R3HDM2-203ENST00000393811 RANGAP1P46060 587 aaPredicted RBP17.66■□□□□ 0.42
R3HDM2-203ENST00000393811 MYT1Q01538 1121 aa17.66■□□□□ 0.42
R3HDM2-203ENST00000393811 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
R3HDM2-203ENST00000393811 APLP2Q06481 763 aa17.63■□□□□ 0.41
R3HDM2-203ENST00000393811 ZNF316A6NFI3 1004 aaPredicted RBP17.6■□□□□ 0.41
R3HDM2-203ENST00000393811 CECR2Q9BXF3 1484 aa17.51■□□□□ 0.39
R3HDM2-203ENST00000393811 MIER1Q8N108 512 aa17.42■□□□□ 0.38
R3HDM2-203ENST00000393811 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
R3HDM2-203ENST00000393811 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
R3HDM2-203ENST00000393811 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
R3HDM2-203ENST00000393811 WIZO95785 1651 aa17.27■□□□□ 0.36
R3HDM2-203ENST00000393811 SOGA1O94964 1423 aa17.24■□□□□ 0.35
R3HDM2-203ENST00000393811 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
R3HDM2-203ENST00000393811 CCDC88BA6NC98 1476 aa17.23■□□□□ 0.35
R3HDM2-203ENST00000393811 TNIKQ9UKE5 1360 aa17.23■□□□□ 0.35
R3HDM2-203ENST00000393811 ITGAEP38570 1179 aa17.21■□□□□ 0.35
R3HDM2-203ENST00000393811 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
R3HDM2-203ENST00000393811 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
R3HDM2-203ENST00000393811 NACADO15069 1562 aa17.12■□□□□ 0.33
R3HDM2-203ENST00000393811 GOLGA3Q08378 1498 aa17.09■□□□□ 0.33
R3HDM2-203ENST00000393811 BCANQ96GW7 911 aa17.08■□□□□ 0.32
R3HDM2-203ENST00000393811 BAZ1AQ9NRL2 1556 aaPredicted RBP17.07■□□□□ 0.32
R3HDM2-203ENST00000393811 CLIP1P30622 1438 aa17.07■□□□□ 0.32
R3HDM2-203ENST00000393811 RUSC2Q8N2Y8 1516 aa17.06■□□□□ 0.32
R3HDM2-203ENST00000393811 EEA1Q15075 1411 aa17.06■□□□□ 0.32
R3HDM2-203ENST00000393811 NEFLP07196 543 aa16.99■□□□□ 0.31
R3HDM2-203ENST00000393811 ATP1B4Q9UN42 357 aaPredicted RBP16.98■□□□□ 0.31
R3HDM2-203ENST00000393811 SUPT16HQ9Y5B9 1047 aaKnown RBP16.97■□□□□ 0.31
R3HDM2-203ENST00000393811 CEP164Q9UPV0 1460 aa16.92■□□□□ 0.3
R3HDM2-203ENST00000393811 TOP2AP11388 1531 aaKnown RBP16.92■□□□□ 0.3
R3HDM2-203ENST00000393811 CLSPNQ9HAW4 1339 aa16.91■□□□□ 0.3
R3HDM2-203ENST00000393811 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
R3HDM2-203ENST00000393811 FKBP8Q14318 412 aa16.85■□□□□ 0.29
R3HDM2-203ENST00000393811 DDX10Q13206 875 aaKnown RBP16.83■□□□□ 0.28
R3HDM2-203ENST00000393811 SMARCA2P51531 1590 aa16.82■□□□□ 0.28
R3HDM2-203ENST00000393811 FAM50AQ14320 339 aaKnown RBP16.81■□□□□ 0.28
R3HDM2-203ENST00000393811 ERICH6Q7L0X2 663 aa16.78■□□□□ 0.28
R3HDM2-203ENST00000393811 KANK4Q5T7N3 995 aaPredicted RBP16.78■□□□□ 0.28
R3HDM2-203ENST00000393811 SMARCA4P51532 1647 aa16.77■□□□□ 0.28
R3HDM2-203ENST00000393811 TSHZ2Q9NRE2 1034 aa16.77■□□□□ 0.28
R3HDM2-203ENST00000393811 ANP32EQ9BTT0 268 aa16.75■□□□□ 0.27
R3HDM2-203ENST00000393811 HIRIP3Q9BW71 556 aaPredicted RBP16.75■□□□□ 0.27
R3HDM2-203ENST00000393811 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
R3HDM2-203ENST00000393811 RAPGEF2Q9Y4G8 1499 aa16.74■□□□□ 0.27
R3HDM2-203ENST00000393811 DHX57Q6P158 1386 aaKnown RBP16.74■□□□□ 0.27
R3HDM2-203ENST00000393811 TRIM52Q96A61 297 aa16.74■□□□□ 0.27
R3HDM2-203ENST00000393811 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
R3HDM2-203ENST00000393811 ANP32CO43423 234 aa16.7■□□□□ 0.26
R3HDM2-203ENST00000393811 P3H3Q8IVL6 736 aa16.65■□□□□ 0.26
R3HDM2-203ENST00000393811 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
R3HDM2-203ENST00000393811 SIN3AQ96ST3 1273 aa16.64■□□□□ 0.25
R3HDM2-203ENST00000393811 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
R3HDM2-203ENST00000393811 KIF21BO75037 1637 aa16.58■□□□□ 0.25
R3HDM2-203ENST00000393811 BAZ1BQ9UIG0 1483 aaKnown RBP16.58■□□□□ 0.24
R3HDM2-203ENST00000393811 SYNJ1O43426 1573 aa16.57■□□□□ 0.24
R3HDM2-203ENST00000393811 IRX6P78412 446 aaPredicted RBP16.54■□□□□ 0.24
R3HDM2-203ENST00000393811 RAB3GAP2Q9H2M9 1393 aa16.53■□□□□ 0.24
R3HDM2-203ENST00000393811 CDK11AQ9UQ88 783 aaPredicted RBP16.52■□□□□ 0.24
R3HDM2-203ENST00000393811 BICRAQ9NZM4 1560 aa16.52■□□□□ 0.23
R3HDM2-203ENST00000393811 RBM19Q9Y4C8 960 aaKnown RBP16.52■□□□□ 0.23
R3HDM2-203ENST00000393811 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.23
R3HDM2-203ENST00000393811 BCL11AQ9H165 835 aa16.51■□□□□ 0.23
R3HDM2-203ENST00000393811 CNGB1Q14028 1251 aaPredicted RBP16.5■□□□□ 0.23
R3HDM2-203ENST00000393811 KIF27Q86VH2 1401 aa16.47■□□□□ 0.23
R3HDM2-203ENST00000393811 TONSLQ96HA7 1378 aa16.47■□□□□ 0.23
R3HDM2-203ENST00000393811 SETD5Q9C0A6 1442 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms