RNA–Protein interactions for RNA: ENST00000393807.9

FAM198B-202, Transcript of family with sequence similarity 198 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM198B, Length 4,544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM198B-202ENST00000393807 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
FAM198B-202ENST00000393807 DCAF8L2P0C7V8 631 aa21.51■■□□□ 1.03
FAM198B-202ENST00000393807 SUPT5HO00267 1087 aaKnown RBP20.03■□□□□ 0.8
FAM198B-202ENST00000393807 SHROOM4Q9ULL8 1493 aa19.91■□□□□ 0.78
FAM198B-202ENST00000393807 ABCC9O60706 1549 aa19.69■□□□□ 0.74
FAM198B-202ENST00000393807 EHMT2Q96KQ7 1210 aa19.26■□□□□ 0.67
FAM198B-202ENST00000393807 PABPN1Q86U42 306 aaKnown RBP eCLIP19.04■□□□□ 0.64
FAM198B-202ENST00000393807 FAM9AQ8IZU1 332 aaPredicted RBP18.88■□□□□ 0.61
FAM198B-202ENST00000393807 CCDC180Q9P1Z9 1646 aa18.75■□□□□ 0.59
FAM198B-202ENST00000393807 APLP2Q06481 763 aa18.75■□□□□ 0.59
FAM198B-202ENST00000393807 RANGAP1P46060 587 aaPredicted RBP18.58■□□□□ 0.56
FAM198B-202ENST00000393807 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
FAM198B-202ENST00000393807 TTBK1Q5TCY1 1321 aaPredicted RBP18.51■□□□□ 0.55
FAM198B-202ENST00000393807 RB1CC1Q8TDY2 1594 aa18.48■□□□□ 0.55
FAM198B-202ENST00000393807 ATP1B4Q9UN42 357 aaPredicted RBP18.38■□□□□ 0.53
FAM198B-202ENST00000393807 UBTFP17480 764 aaKnown RBP18.33■□□□□ 0.53
FAM198B-202ENST00000393807 NACADO15069 1562 aa18.25■□□□□ 0.51
FAM198B-202ENST00000393807 SCRIBQ14160 1630 aa18.21■□□□□ 0.51
FAM198B-202ENST00000393807 PCGF6Q9BYE7 350 aa18.1■□□□□ 0.49
FAM198B-202ENST00000393807 ZCCHC6Q5VYS8 1495 aaKnown RBP18.09■□□□□ 0.49
FAM198B-202ENST00000393807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
FAM198B-202ENST00000393807 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
FAM198B-202ENST00000393807 PPARGC1BQ86YN6 1023 aaKnown RBP17.86■□□□□ 0.45
FAM198B-202ENST00000393807 CCER1Q8TC90 406 aaPredicted RBP17.84■□□□□ 0.45
FAM198B-202ENST00000393807 FBLN2P98095 1184 aa17.82■□□□□ 0.44
FAM198B-202ENST00000393807 CHIC1Q5VXU3 224 aa17.76■□□□□ 0.43
FAM198B-202ENST00000393807 MYT1LQ9UL68 1186 aa17.75■□□□□ 0.43
FAM198B-202ENST00000393807 LOC105371045A0A1W2PR82 267 aa17.69■□□□□ 0.42
FAM198B-202ENST00000393807 ERCC6Q03468 1493 aa17.67■□□□□ 0.42
FAM198B-202ENST00000393807 ITGAEP38570 1179 aa17.66■□□□□ 0.42
FAM198B-202ENST00000393807 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.42
FAM198B-202ENST00000393807 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
FAM198B-202ENST00000393807 ZEB1P37275 1124 aaPredicted RBP17.56■□□□□ 0.4
FAM198B-202ENST00000393807 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
FAM198B-202ENST00000393807 PELP1Q8IZL8 1130 aaKnown RBP17.53■□□□□ 0.4
FAM198B-202ENST00000393807 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
FAM198B-202ENST00000393807 TRIM26Q12899 539 aaPredicted RBP17.41■□□□□ 0.38
FAM198B-202ENST00000393807 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
FAM198B-202ENST00000393807 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
FAM198B-202ENST00000393807 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
FAM198B-202ENST00000393807 POLR3GLQ9BT43 218 aa17.27■□□□□ 0.36
FAM198B-202ENST00000393807 FAM50AQ14320 339 aaKnown RBP17.25■□□□□ 0.35
FAM198B-202ENST00000393807 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
FAM198B-202ENST00000393807 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
FAM198B-202ENST00000393807 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
FAM198B-202ENST00000393807 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
FAM198B-202ENST00000393807 P3H3Q8IVL6 736 aa17.19■□□□□ 0.34
FAM198B-202ENST00000393807 ARID3CA6NKF2 412 aa17.17■□□□□ 0.34
FAM198B-202ENST00000393807 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
FAM198B-202ENST00000393807 YTHDC1Q96MU7 727 aaKnown RBP17.13■□□□□ 0.33
FAM198B-202ENST00000393807 CNGB1Q14028 1251 aaPredicted RBP17.12■□□□□ 0.33
FAM198B-202ENST00000393807 TRIM52Q96A61 297 aa17.1■□□□□ 0.33
FAM198B-202ENST00000393807 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
FAM198B-202ENST00000393807 TRHP20396 242 aaPredicted RBP17.06■□□□□ 0.32
FAM198B-202ENST00000393807 EIF4G1Q04637 1599 aaKnown RBP17.04■□□□□ 0.32
FAM198B-202ENST00000393807 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.32
FAM198B-202ENST00000393807 NEFLP07196 543 aa17.01■□□□□ 0.31
FAM198B-202ENST00000393807 ATAD2BQ9ULI0 1458 aa17.01■□□□□ 0.31
FAM198B-202ENST00000393807 CADPSQ9ULU8 1353 aa16.99■□□□□ 0.31
FAM198B-202ENST00000393807 HRCP23327 699 aa16.95■□□□□ 0.3
FAM198B-202ENST00000393807 ZNF777Q9ULD5 760 aaPredicted RBP16.93■□□□□ 0.3
FAM198B-202ENST00000393807 NEUROD1Q13562 356 aa16.91■□□□□ 0.3
FAM198B-202ENST00000393807 CDK11AQ9UQ88 783 aaPredicted RBP16.91■□□□□ 0.3
FAM198B-202ENST00000393807 CC2D2AQ9P2K1 1620 aa16.91■□□□□ 0.3
FAM198B-202ENST00000393807 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
FAM198B-202ENST00000393807 ZNF326Q5BKZ1 582 aaKnown RBP16.88■□□□□ 0.29
FAM198B-202ENST00000393807 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
FAM198B-202ENST00000393807 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
FAM198B-202ENST00000393807 CEP164Q9UPV0 1460 aa16.84■□□□□ 0.29
FAM198B-202ENST00000393807 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
FAM198B-202ENST00000393807 ERICH6Q7L0X2 663 aa16.83■□□□□ 0.28
FAM198B-202ENST00000393807 MYT1Q01538 1121 aa16.82■□□□□ 0.28
FAM198B-202ENST00000393807 SMARCA4P51532 1647 aa16.8■□□□□ 0.28
FAM198B-202ENST00000393807 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
FAM198B-202ENST00000393807 BCANQ96GW7 911 aa16.75■□□□□ 0.27
FAM198B-202ENST00000393807 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.27
FAM198B-202ENST00000393807 SOGA1O94964 1423 aa16.7■□□□□ 0.26
FAM198B-202ENST00000393807 BICRAQ9NZM4 1560 aa16.7■□□□□ 0.26
FAM198B-202ENST00000393807 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
FAM198B-202ENST00000393807 PLPPR3Q6T4P5 718 aa16.68■□□□□ 0.26
FAM198B-202ENST00000393807 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
FAM198B-202ENST00000393807 CCDC88BA6NC98 1476 aa16.66■□□□□ 0.26
FAM198B-202ENST00000393807 CYB5RLQ6IPT4 315 aa16.66■□□□□ 0.26
FAM198B-202ENST00000393807 KCNH8Q96L42 1107 aa16.64■□□□□ 0.25
FAM198B-202ENST00000393807 ABCC8Q09428 1581 aa16.63■□□□□ 0.25
FAM198B-202ENST00000393807 TOP2AP11388 1531 aaKnown RBP16.63■□□□□ 0.25
FAM198B-202ENST00000393807 CHGAP10645 457 aaKnown RBP16.6■□□□□ 0.25
FAM198B-202ENST00000393807 DIEXFQ68CQ4 756 aaKnown RBP16.59■□□□□ 0.25
FAM198B-202ENST00000393807 CUX2O14529 1486 aa16.59■□□□□ 0.25
FAM198B-202ENST00000393807 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
FAM198B-202ENST00000393807 WIZO95785 1651 aa16.57■□□□□ 0.24
FAM198B-202ENST00000393807 CHIC2Q9UKJ5 165 aa16.57■□□□□ 0.24
FAM198B-202ENST00000393807 PLEKHD1A6NEE1 506 aa16.55■□□□□ 0.24
FAM198B-202ENST00000393807 MTUS2Q5JR59 1369 aa16.54■□□□□ 0.24
FAM198B-202ENST00000393807 TSPY4P0CV99 314 aa16.54■□□□□ 0.24
FAM198B-202ENST00000393807 TSPY10P0CW01 314 aa16.54■□□□□ 0.24
FAM198B-202ENST00000393807 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
FAM198B-202ENST00000393807 NESP48681 1621 aa16.53■□□□□ 0.24
FAM198B-202ENST00000393807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.247e-11■■□□□ 13.6
FAM198B-202ENST00000393807 HMGXB3Q12766 1538 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms