RNA–Protein interactions for RNA: ENST00000393319.7

TRIM7-204, Transcript of tripartite motif containing 7, humanhuman

TSL 1 (best) BASIC

Gene TRIM7, Length 2,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7-204ENST00000393319 NISCHQ9Y2I1 1504 aa38.63■■■■□ 3.77
TRIM7-204ENST00000393319 CCDC180Q9P1Z9 1646 aa33.52■■■□□ 2.96
TRIM7-204ENST00000393319 ZCCHC6Q5VYS8 1495 aaKnown RBP32.43■■■□□ 2.78
TRIM7-204ENST00000393319 DCAF8L2P0C7V8 631 aa32.1■■■□□ 2.73
TRIM7-204ENST00000393319 ABCC9O60706 1549 aa31.93■■■□□ 2.7
TRIM7-204ENST00000393319 DCAF1Q9Y4B6 1507 aa31.84■■■□□ 2.69
TRIM7-204ENST00000393319 SHROOM4Q9ULL8 1493 aa31.71■■■□□ 2.67
TRIM7-204ENST00000393319 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
TRIM7-204ENST00000393319 NACADO15069 1562 aa31.28■■■□□ 2.6
TRIM7-204ENST00000393319 RB1CC1Q8TDY2 1594 aa31.02■■■□□ 2.56
TRIM7-204ENST00000393319 SCRIBQ14160 1630 aa31■■■□□ 2.55
TRIM7-204ENST00000393319 SUPT5HO00267 1087 aaKnown RBP30.51■■■□□ 2.48
TRIM7-204ENST00000393319 UNC13AQ9UPW8 1703 aa30.4■■■□□ 2.46
TRIM7-204ENST00000393319 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
TRIM7-204ENST00000393319 BICRAQ9NZM4 1560 aa30.17■■■□□ 2.42
TRIM7-204ENST00000393319 CECR2Q9BXF3 1484 aa30.12■■■□□ 2.41
TRIM7-204ENST00000393319 RSF1Q96T23 1441 aaPredicted RBP30.03■■■□□ 2.4
TRIM7-204ENST00000393319 MROH2BQ7Z745 1585 aa29.9■■■□□ 2.38
TRIM7-204ENST00000393319 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
TRIM7-204ENST00000393319 SMARCA4P51532 1647 aa29.66■■■□□ 2.34
TRIM7-204ENST00000393319 WIZO95785 1651 aa29.62■■■□□ 2.33
TRIM7-204ENST00000393319 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.27
TRIM7-204ENST00000393319 TOP2AP11388 1531 aaKnown RBP29.26■■■□□ 2.27
TRIM7-204ENST00000393319 EIF4G1Q04637 1599 aaKnown RBP29.24■■■□□ 2.27
TRIM7-204ENST00000393319 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
TRIM7-204ENST00000393319 CHIC1Q5VXU3 224 aa29.16■■■□□ 2.26
TRIM7-204ENST00000393319 SMARCA2P51531 1590 aa29.12■■■□□ 2.25
TRIM7-204ENST00000393319 CCDC88BA6NC98 1476 aa29.05■■■□□ 2.24
TRIM7-204ENST00000393319 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
TRIM7-204ENST00000393319 NCAPD3P42695 1498 aa28.94■■■□□ 2.22
TRIM7-204ENST00000393319 HMGXB3Q12766 1538 aa28.84■■■□□ 2.21
TRIM7-204ENST00000393319 CC2D2AQ9P2K1 1620 aa28.82■■■□□ 2.2
TRIM7-204ENST00000393319 TRIM41Q8WV44 630 aa28.61■■■□□ 2.17
TRIM7-204ENST00000393319 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
TRIM7-204ENST00000393319 DNAJC5BQ9UF47 199 aa28.35■■■□□ 2.13
TRIM7-204ENST00000393319 CFTRP13569 1480 aa28.32■■■□□ 2.12
TRIM7-204ENST00000393319 CADPSQ9ULU8 1353 aa28.24■■■□□ 2.11
TRIM7-204ENST00000393319 WRNQ14191 1432 aaPredicted RBP eCLIP28.24■■■□□ 2.11
TRIM7-204ENST00000393319 FAM9AQ8IZU1 332 aaPredicted RBP28.19■■■□□ 2.1
TRIM7-204ENST00000393319 LOC105371045A0A1W2PR82 267 aa28.14■■■□□ 2.1
TRIM7-204ENST00000393319 SYNJ1O43426 1573 aa28.12■■■□□ 2.09
TRIM7-204ENST00000393319 NESP48681 1621 aa28.05■■■□□ 2.08
TRIM7-204ENST00000393319 PRDM2Q13029 1718 aa28■■■□□ 2.07
TRIM7-204ENST00000393319 SOGA1O94964 1423 aa27.97■■■□□ 2.07
TRIM7-204ENST00000393319 TOP2BQ02880 1626 aa27.95■■■□□ 2.06
TRIM7-204ENST00000393319 CUX1P39880 1505 aa27.94■■■□□ 2.06
TRIM7-204ENST00000393319 FANCD2Q9BXW9 1451 aa27.92■■■□□ 2.06
TRIM7-204ENST00000393319 LAMC3Q9Y6N6 1575 aa27.89■■■□□ 2.06
TRIM7-204ENST00000393319 RUSC2Q8N2Y8 1516 aa27.88■■■□□ 2.05
TRIM7-204ENST00000393319 BIVM-ERCC5R4GMW8 1640 aa27.87■■■□□ 2.05
TRIM7-204ENST00000393319 EHMT2Q96KQ7 1210 aa27.87■■■□□ 2.05
TRIM7-204ENST00000393319 EEA1Q15075 1411 aa27.74■■■□□ 2.03
TRIM7-204ENST00000393319 PDS5BQ9NTI5 1447 aa27.74■■■□□ 2.03
TRIM7-204ENST00000393319 CSRNP3Q8WYN3 585 aa27.73■■■□□ 2.03
TRIM7-204ENST00000393319 CEP164Q9UPV0 1460 aa27.71■■■□□ 2.03
TRIM7-204ENST00000393319 FGD5Q6ZNL6 1462 aa27.62■■■□□ 2.01
TRIM7-204ENST00000393319 TOPBP1Q92547 1522 aa27.61■■■□□ 2.01
TRIM7-204ENST00000393319 DNMBPQ6XZF7 1577 aa27.6■■■□□ 2.01
TRIM7-204ENST00000393319 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
TRIM7-204ENST00000393319 URB2Q14146 1524 aaKnown RBP27.59■■■□□ 2.01
TRIM7-204ENST00000393319 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
TRIM7-204ENST00000393319 POLA1P09884 1462 aaPredicted RBP27.5■■□□□ 1.99
TRIM7-204ENST00000393319 CUX2O14529 1486 aa27.47■■□□□ 1.99
TRIM7-204ENST00000393319 RAD54L2Q9Y4B4 1467 aa27.47■■□□□ 1.99
TRIM7-204ENST00000393319 GOLGA3Q08378 1498 aa27.42■■□□□ 1.98
TRIM7-204ENST00000393319 UBTFP17480 764 aaKnown RBP27.41■■□□□ 1.98
TRIM7-204ENST00000393319 KIF21BO75037 1637 aa27.38■■□□□ 1.97
TRIM7-204ENST00000393319 MRC2Q9UBG0 1479 aa27.37■■□□□ 1.97
TRIM7-204ENST00000393319 RAPGEF2Q9Y4G8 1499 aa27.37■■□□□ 1.97
TRIM7-204ENST00000393319 TNIKQ9UKE5 1360 aa27.36■■□□□ 1.97
TRIM7-204ENST00000393319 ABCA10Q8WWZ4 1543 aa27.34■■□□□ 1.97
TRIM7-204ENST00000393319 PRXQ9BXM0 1461 aa27.34■■□□□ 1.97
TRIM7-204ENST00000393319 IGF1RP08069 1367 aa27.33■■□□□ 1.97
TRIM7-204ENST00000393319 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
TRIM7-204ENST00000393319 CEP162Q5TB80 1403 aa27.25■■□□□ 1.95
TRIM7-204ENST00000393319 TDRD9Q8NDG6 1382 aaKnown RBP27.22■■□□□ 1.95
TRIM7-204ENST00000393319 WDR62O43379 1518 aa27.21■■□□□ 1.95
TRIM7-204ENST00000393319 ERICH3Q5RHP9 1530 aa27.2■■□□□ 1.95
TRIM7-204ENST00000393319 WDR97A6NE52 1622 aa27.18■■□□□ 1.94
TRIM7-204ENST00000393319 TARBP1Q13395 1621 aaKnown RBP27.17■■□□□ 1.94
TRIM7-204ENST00000393319 CARMIL1Q5VZK9 1371 aa27.16■■□□□ 1.94
TRIM7-204ENST00000393319 THOC2Q8NI27 1593 aaKnown RBP27.12■■□□□ 1.93
TRIM7-204ENST00000393319 HRCP23327 699 aa27.11■■□□□ 1.93
TRIM7-204ENST00000393319 GAPVD1Q14C86 1478 aa27.1■■□□□ 1.93
TRIM7-204ENST00000393319 ABCA5Q8WWZ7 1642 aa27.09■■□□□ 1.93
TRIM7-204ENST00000393319 RANGAP1P46060 587 aaPredicted RBP27.07■■□□□ 1.92
TRIM7-204ENST00000393319 PCGF6Q9BYE7 350 aa27.04■■□□□ 1.92
TRIM7-204ENST00000393319 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.92
TRIM7-204ENST00000393319 IFT140Q96RY7 1462 aa27.03■■□□□ 1.92
TRIM7-204ENST00000393319 CLIP1P30622 1438 aa27.03■■□□□ 1.92
TRIM7-204ENST00000393319 ZNF608Q9ULD9 1512 aaPredicted RBP27■■□□□ 1.91
TRIM7-204ENST00000393319 CUL7Q14999 1698 aa26.95■■□□□ 1.9
TRIM7-204ENST00000393319 PPARGC1BQ86YN6 1023 aaKnown RBP26.86■■□□□ 1.89
TRIM7-204ENST00000393319 GRIN2BQ13224 1484 aa26.85■■□□□ 1.89
TRIM7-204ENST00000393319 PBRM1Q86U86 1689 aa26.84■■□□□ 1.89
TRIM7-204ENST00000393319 EIF4G3O43432 1585 aaKnown RBP26.8■■□□□ 1.88
TRIM7-204ENST00000393319 FHAD1B1AJZ9 1412 aa26.78■■□□□ 1.88
TRIM7-204ENST00000393319 VPS8Q8N3P4 1428 aa26.77■■□□□ 1.88
TRIM7-204ENST00000393319 ARAP1Q96P48 1450 aa26.76■■□□□ 1.87
TRIM7-204ENST00000393319 ARHGAP35Q9NRY4 1499 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms