RNA–Protein interactions for RNA: ENST00000393230.6

NRF1-204, Transcript of nuclear respiratory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NRF1, Length 3,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1-204ENST00000393230 NISCHQ9Y2I1 1504 aa23.4■■□□□ 1.34
NRF1-204ENST00000393230 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.84
NRF1-204ENST00000393230 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
NRF1-204ENST00000393230 DCAF1Q9Y4B6 1507 aa19.37■□□□□ 0.69
NRF1-204ENST00000393230 SHROOM4Q9ULL8 1493 aa19.32■□□□□ 0.68
NRF1-204ENST00000393230 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
NRF1-204ENST00000393230 MYO15BQ96JP2 1530 aa19.02■□□□□ 0.63
NRF1-204ENST00000393230 SUPT5HO00267 1087 aaKnown RBP18.97■□□□□ 0.63
NRF1-204ENST00000393230 ABCC9O60706 1549 aa18.84■□□□□ 0.61
NRF1-204ENST00000393230 NACADO15069 1562 aa18.8■□□□□ 0.6
NRF1-204ENST00000393230 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
NRF1-204ENST00000393230 RB1CC1Q8TDY2 1594 aa18.56■□□□□ 0.56
NRF1-204ENST00000393230 RSF1Q96T23 1441 aaPredicted RBP18.28■□□□□ 0.52
NRF1-204ENST00000393230 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
NRF1-204ENST00000393230 UNC13AQ9UPW8 1703 aa18.15■□□□□ 0.5
NRF1-204ENST00000393230 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
NRF1-204ENST00000393230 MROH2BQ7Z745 1585 aa18.07■□□□□ 0.48
NRF1-204ENST00000393230 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
NRF1-204ENST00000393230 WIZO95785 1651 aa17.94■□□□□ 0.46
NRF1-204ENST00000393230 BICRAQ9NZM4 1560 aa17.94■□□□□ 0.46
NRF1-204ENST00000393230 SMARCA4P51532 1647 aa17.92■□□□□ 0.46
NRF1-204ENST00000393230 PCGF6Q9BYE7 350 aa17.88■□□□□ 0.45
NRF1-204ENST00000393230 PABPN1Q86U42 306 aaKnown RBP eCLIP17.82■□□□□ 0.44
NRF1-204ENST00000393230 LOC105371045A0A1W2PR82 267 aa17.8■□□□□ 0.44
NRF1-204ENST00000393230 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
NRF1-204ENST00000393230 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
NRF1-204ENST00000393230 PEG3Q9GZU2 1588 aa17.68■□□□□ 0.42
NRF1-204ENST00000393230 FAM9AQ8IZU1 332 aaPredicted RBP17.66■□□□□ 0.42
NRF1-204ENST00000393230 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
NRF1-204ENST00000393230 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
NRF1-204ENST00000393230 CCDC88BA6NC98 1476 aa17.6■□□□□ 0.41
NRF1-204ENST00000393230 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
NRF1-204ENST00000393230 HRCP23327 699 aa17.57■□□□□ 0.4
NRF1-204ENST00000393230 PPARGC1BQ86YN6 1023 aaKnown RBP17.54■□□□□ 0.4
NRF1-204ENST00000393230 ATAD2BQ9ULI0 1458 aa17.53■□□□□ 0.4
NRF1-204ENST00000393230 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
NRF1-204ENST00000393230 HMGXB3Q12766 1538 aa17.36■□□□□ 0.37
NRF1-204ENST00000393230 ABCC8Q09428 1581 aa17.33■□□□□ 0.37
NRF1-204ENST00000393230 NCAPD3P42695 1498 aa17.33■□□□□ 0.37
NRF1-204ENST00000393230 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
NRF1-204ENST00000393230 TRIM26Q12899 539 aaPredicted RBP17.22■□□□□ 0.35
NRF1-204ENST00000393230 EEA1Q15075 1411 aa17.2■□□□□ 0.34
NRF1-204ENST00000393230 TTBK1Q5TCY1 1321 aaPredicted RBP17.17■□□□□ 0.34
NRF1-204ENST00000393230 SYNJ1O43426 1573 aa17.1■□□□□ 0.33
NRF1-204ENST00000393230 SOGA1O94964 1423 aa17.08■□□□□ 0.32
NRF1-204ENST00000393230 CC2D2AQ9P2K1 1620 aa17.05■□□□□ 0.32
NRF1-204ENST00000393230 CFTRP13569 1480 aa17.04■□□□□ 0.32
NRF1-204ENST00000393230 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
NRF1-204ENST00000393230 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
NRF1-204ENST00000393230 BIVM-ERCC5R4GMW8 1640 aa17.01■□□□□ 0.31
NRF1-204ENST00000393230 PRDM2Q13029 1718 aa17■□□□□ 0.31
NRF1-204ENST00000393230 RUSC2Q8N2Y8 1516 aa16.97■□□□□ 0.31
NRF1-204ENST00000393230 GOLGA3Q08378 1498 aa16.96■□□□□ 0.31
NRF1-204ENST00000393230 TNIKQ9UKE5 1360 aa16.96■□□□□ 0.31
NRF1-204ENST00000393230 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
NRF1-204ENST00000393230 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
NRF1-204ENST00000393230 KIF21BO75037 1637 aa16.92■□□□□ 0.3
NRF1-204ENST00000393230 CEP162Q5TB80 1403 aa16.89■□□□□ 0.29
NRF1-204ENST00000393230 CUX1P39880 1505 aa16.88■□□□□ 0.29
NRF1-204ENST00000393230 UBTFP17480 764 aaKnown RBP16.87■□□□□ 0.29
NRF1-204ENST00000393230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.82■□□□□ 0.28
NRF1-204ENST00000393230 RANGAP1P46060 587 aaPredicted RBP16.79■□□□□ 0.28
NRF1-204ENST00000393230 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
NRF1-204ENST00000393230 CCER1Q8TC90 406 aaPredicted RBP16.78■□□□□ 0.28
NRF1-204ENST00000393230 ZEB1P37275 1124 aaPredicted RBP16.78■□□□□ 0.28
NRF1-204ENST00000393230 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
NRF1-204ENST00000393230 FANCD2Q9BXW9 1451 aa16.74■□□□□ 0.27
NRF1-204ENST00000393230 RAPGEF2Q9Y4G8 1499 aa16.73■□□□□ 0.27
NRF1-204ENST00000393230 PRXQ9BXM0 1461 aa16.71■□□□□ 0.27
NRF1-204ENST00000393230 LAMC3Q9Y6N6 1575 aa16.7■□□□□ 0.26
NRF1-204ENST00000393230 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
NRF1-204ENST00000393230 CLIP1P30622 1438 aa16.69■□□□□ 0.26
NRF1-204ENST00000393230 FGD5Q6ZNL6 1462 aa16.66■□□□□ 0.26
NRF1-204ENST00000393230 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
NRF1-204ENST00000393230 CUX2O14529 1486 aa16.64■□□□□ 0.25
NRF1-204ENST00000393230 NESP48681 1621 aa16.62■□□□□ 0.25
NRF1-204ENST00000393230 VPS8Q8N3P4 1428 aa16.6■□□□□ 0.25
NRF1-204ENST00000393230 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
NRF1-204ENST00000393230 PDS5BQ9NTI5 1447 aa16.58■□□□□ 0.25
NRF1-204ENST00000393230 IGF1RP08069 1367 aa16.54■□□□□ 0.24
NRF1-204ENST00000393230 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
NRF1-204ENST00000393230 POLA1P09884 1462 aaPredicted RBP16.53■□□□□ 0.24
NRF1-204ENST00000393230 APLP2Q06481 763 aa16.51■□□□□ 0.23
NRF1-204ENST00000393230 CARMIL1Q5VZK9 1371 aa16.5■□□□□ 0.23
NRF1-204ENST00000393230 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
NRF1-204ENST00000393230 URB2Q14146 1524 aaKnown RBP16.48■□□□□ 0.23
NRF1-204ENST00000393230 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
NRF1-204ENST00000393230 ARAP1Q96P48 1450 aa16.44■□□□□ 0.22
NRF1-204ENST00000393230 KIF21AQ7Z4S6 1674 aa16.44■□□□□ 0.22
NRF1-204ENST00000393230 CUL7Q14999 1698 aa16.43■□□□□ 0.22
NRF1-204ENST00000393230 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
NRF1-204ENST00000393230 ARHGAP35Q9NRY4 1499 aa16.38■□□□□ 0.21
NRF1-204ENST00000393230 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
NRF1-204ENST00000393230 MRC2Q9UBG0 1479 aa16.33■□□□□ 0.21
NRF1-204ENST00000393230 DIEXFQ68CQ4 756 aaKnown RBP16.33■□□□□ 0.2
NRF1-204ENST00000393230 GAPVD1Q14C86 1478 aa16.32■□□□□ 0.2
NRF1-204ENST00000393230 YTHDC1Q96MU7 727 aaKnown RBP16.31■□□□□ 0.2
NRF1-204ENST00000393230 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
NRF1-204ENST00000393230 TARBP1Q13395 1621 aaKnown RBP16.29■□□□□ 0.2
NRF1-204ENST00000393230 CTTNBP2Q8WZ74 1663 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms