RNA–Protein interactions for RNA: ENST00000392963.5

NBPF1-201, Transcript of NBPF member 1, humanhuman

TSL 5

Gene NBPF1, Length 2,672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1-201ENST00000392963 NISCHQ9Y2I1 1504 aa17.18■□□□□ 0.34
NBPF1-201ENST00000392963 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
NBPF1-201ENST00000392963 ABCC9O60706 1549 aa14.76□□□□□ -0.05
NBPF1-201ENST00000392963 DCAF8L2P0C7V8 631 aa14.67□□□□□ -0.06
NBPF1-201ENST00000392963 ZCCHC6Q5VYS8 1495 aaKnown RBP14.35□□□□□ -0.11
NBPF1-201ENST00000392963 SHROOM4Q9ULL8 1493 aa14.21□□□□□ -0.14
NBPF1-201ENST00000392963 RB1CC1Q8TDY2 1594 aa14.05□□□□□ -0.16
NBPF1-201ENST00000392963 NACADO15069 1562 aa14.04□□□□□ -0.16
NBPF1-201ENST00000392963 SCRIBQ14160 1630 aa14.04□□□□□ -0.16
NBPF1-201ENST00000392963 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
NBPF1-201ENST00000392963 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.18
NBPF1-201ENST00000392963 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
NBPF1-201ENST00000392963 MYO15BQ96JP2 1530 aa13.89□□□□□ -0.19
NBPF1-201ENST00000392963 BICRAQ9NZM4 1560 aa13.72□□□□□ -0.21
NBPF1-201ENST00000392963 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
NBPF1-201ENST00000392963 SUPT5HO00267 1087 aaKnown RBP13.48□□□□□ -0.25
NBPF1-201ENST00000392963 MROH2BQ7Z745 1585 aa13.37□□□□□ -0.27
NBPF1-201ENST00000392963 DNAJC5BQ9UF47 199 aa13.37□□□□□ -0.27
NBPF1-201ENST00000392963 EIF4G1Q04637 1599 aaKnown RBP13.33□□□□□ -0.28
NBPF1-201ENST00000392963 WIZO95785 1651 aa13.3□□□□□ -0.28
NBPF1-201ENST00000392963 SMARCA4P51532 1647 aa13.29□□□□□ -0.28
NBPF1-201ENST00000392963 RSF1Q96T23 1441 aaPredicted RBP13.27□□□□□ -0.28
NBPF1-201ENST00000392963 CC2D2AQ9P2K1 1620 aa13.26□□□□□ -0.29
NBPF1-201ENST00000392963 BAZ1AQ9NRL2 1556 aaPredicted RBP13.25□□□□□ -0.29
NBPF1-201ENST00000392963 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
NBPF1-201ENST00000392963 BAZ1BQ9UIG0 1483 aaKnown RBP13.08□□□□□ -0.32
NBPF1-201ENST00000392963 SMARCA2P51531 1590 aa13.04□□□□□ -0.32
NBPF1-201ENST00000392963 PEG3Q9GZU2 1588 aa13□□□□□ -0.33
NBPF1-201ENST00000392963 NCAPD3P42695 1498 aa12.99□□□□□ -0.33
NBPF1-201ENST00000392963 TOP2AP11388 1531 aaKnown RBP12.98□□□□□ -0.33
NBPF1-201ENST00000392963 AEBP2Q6ZN18 517 aaPredicted RBP12.96□□□□□ -0.33
NBPF1-201ENST00000392963 CCDC88BA6NC98 1476 aa12.94□□□□□ -0.34
NBPF1-201ENST00000392963 CHIC1Q5VXU3 224 aa12.93□□□□□ -0.34
NBPF1-201ENST00000392963 HMGXB3Q12766 1538 aa12.92□□□□□ -0.34
NBPF1-201ENST00000392963 NESP48681 1621 aa12.89□□□□□ -0.35
NBPF1-201ENST00000392963 PELP1Q8IZL8 1130 aaKnown RBP12.73□□□□□ -0.37
NBPF1-201ENST00000392963 ABCC8Q09428 1581 aa12.71□□□□□ -0.37
NBPF1-201ENST00000392963 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.38
NBPF1-201ENST00000392963 KIF21AQ7Z4S6 1674 aa12.67□□□□□ -0.38
NBPF1-201ENST00000392963 CFTRP13569 1480 aa12.67□□□□□ -0.38
NBPF1-201ENST00000392963 ERCC6Q03468 1493 aa12.62□□□□□ -0.39
NBPF1-201ENST00000392963 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
NBPF1-201ENST00000392963 LAMC3Q9Y6N6 1575 aa12.61□□□□□ -0.39
NBPF1-201ENST00000392963 PRDM2Q13029 1718 aa12.57□□□□□ -0.4
NBPF1-201ENST00000392963 EHMT2Q96KQ7 1210 aa12.55□□□□□ -0.4
NBPF1-201ENST00000392963 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
NBPF1-201ENST00000392963 TRIM41Q8WV44 630 aa12.54□□□□□ -0.4
NBPF1-201ENST00000392963 PDS5BQ9NTI5 1447 aa12.54□□□□□ -0.4
NBPF1-201ENST00000392963 HRCP23327 699 aa12.54□□□□□ -0.4
NBPF1-201ENST00000392963 FAM9AQ8IZU1 332 aaPredicted RBP12.53□□□□□ -0.4
NBPF1-201ENST00000392963 SYNJ1O43426 1573 aa12.52□□□□□ -0.4
NBPF1-201ENST00000392963 URB2Q14146 1524 aaKnown RBP12.5□□□□□ -0.41
NBPF1-201ENST00000392963 CUX1P39880 1505 aa12.5□□□□□ -0.41
NBPF1-201ENST00000392963 WRNQ14191 1432 aaPredicted RBP eCLIP12.5□□□□□ -0.41
NBPF1-201ENST00000392963 RAD54L2Q9Y4B4 1467 aa12.44□□□□□ -0.42
NBPF1-201ENST00000392963 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
NBPF1-201ENST00000392963 THOC2Q8NI27 1593 aaKnown RBP12.44□□□□□ -0.42
NBPF1-201ENST00000392963 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
NBPF1-201ENST00000392963 FGD5Q6ZNL6 1462 aa12.41□□□□□ -0.42
NBPF1-201ENST00000392963 RUSC2Q8N2Y8 1516 aa12.4□□□□□ -0.42
NBPF1-201ENST00000392963 TOP2BQ02880 1626 aa12.38□□□□□ -0.43
NBPF1-201ENST00000392963 DNMBPQ6XZF7 1577 aa12.38□□□□□ -0.43
NBPF1-201ENST00000392963 POLA1P09884 1462 aaPredicted RBP12.38□□□□□ -0.43
NBPF1-201ENST00000392963 SOGA1O94964 1423 aa12.38□□□□□ -0.43
NBPF1-201ENST00000392963 MYT1Q01538 1121 aa12.35□□□□□ -0.43
NBPF1-201ENST00000392963 TDRD9Q8NDG6 1382 aaKnown RBP12.35□□□□□ -0.43
NBPF1-201ENST00000392963 BIVM-ERCC5R4GMW8 1640 aa12.35□□□□□ -0.43
NBPF1-201ENST00000392963 WDR62O43379 1518 aa12.35□□□□□ -0.43
NBPF1-201ENST00000392963 CUX2O14529 1486 aa12.34□□□□□ -0.43
NBPF1-201ENST00000392963 ZNF608Q9ULD9 1512 aaPredicted RBP12.33□□□□□ -0.44
NBPF1-201ENST00000392963 AQRO60306 1485 aaKnown RBP eCLIP12.31□□□□□ -0.44
NBPF1-201ENST00000392963 LOC105371045A0A1W2PR82 267 aa12.28□□□□□ -0.44
NBPF1-201ENST00000392963 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
NBPF1-201ENST00000392963 RANGAP1P46060 587 aaPredicted RBP12.24□□□□□ -0.45
NBPF1-201ENST00000392963 PPARGC1BQ86YN6 1023 aaKnown RBP12.24□□□□□ -0.45
NBPF1-201ENST00000392963 FBLN2P98095 1184 aa12.23□□□□□ -0.45
NBPF1-201ENST00000392963 EIF4G3O43432 1585 aaKnown RBP12.21□□□□□ -0.46
NBPF1-201ENST00000392963 WDR97A6NE52 1622 aa12.21□□□□□ -0.46
NBPF1-201ENST00000392963 IFT140Q96RY7 1462 aa12.19□□□□□ -0.46
NBPF1-201ENST00000392963 ABCA10Q8WWZ4 1543 aa12.19□□□□□ -0.46
NBPF1-201ENST00000392963 GAPVD1Q14C86 1478 aa12.17□□□□□ -0.46
NBPF1-201ENST00000392963 KIF27Q86VH2 1401 aa12.16□□□□□ -0.46
NBPF1-201ENST00000392963 PBRM1Q86U86 1689 aa12.15□□□□□ -0.46
NBPF1-201ENST00000392963 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
NBPF1-201ENST00000392963 ABCA5Q8WWZ7 1642 aa12.14□□□□□ -0.47
NBPF1-201ENST00000392963 IGF1RP08069 1367 aa12.13□□□□□ -0.47
NBPF1-201ENST00000392963 SNAPC4Q5SXM2 1469 aa12.13□□□□□ -0.47
NBPF1-201ENST00000392963 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
NBPF1-201ENST00000392963 UBTFP17480 764 aaKnown RBP12.1□□□□□ -0.47
NBPF1-201ENST00000392963 RAPGEF2Q9Y4G8 1499 aa12.1□□□□□ -0.47
NBPF1-201ENST00000392963 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
NBPF1-201ENST00000392963 TTBK1Q5TCY1 1321 aaPredicted RBP12.07□□□□□ -0.48
NBPF1-201ENST00000392963 CARMIL1Q5VZK9 1371 aa12.07□□□□□ -0.48
NBPF1-201ENST00000392963 GRIN2BQ13224 1484 aa12.07□□□□□ -0.48
NBPF1-201ENST00000392963 CHD1O14646 1710 aa12.05□□□□□ -0.48
NBPF1-201ENST00000392963 P3H3Q8IVL6 736 aa12.02□□□□□ -0.49
NBPF1-201ENST00000392963 ADAMTS12P58397 1594 aa12.02□□□□□ -0.49
NBPF1-201ENST00000392963 ERICH3Q5RHP9 1530 aa12.01□□□□□ -0.49
NBPF1-201ENST00000392963 PCGF6Q9BYE7 350 aa12.01□□□□□ -0.49
NBPF1-201ENST00000392963 PRXQ9BXM0 1461 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms