RNA–Protein interactions for RNA: ENST00000392950.9

STRADA-204, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 1 (best) BASIC

Gene STRADA, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-204ENST00000392950 NISCHQ9Y2I1 1504 aa29.49■■■□□ 2.31
STRADA-204ENST00000392950 CCDC180Q9P1Z9 1646 aa25.55■■□□□ 1.68
STRADA-204ENST00000392950 ZCCHC6Q5VYS8 1495 aaKnown RBP24.8■■□□□ 1.56
STRADA-204ENST00000392950 DCAF8L2P0C7V8 631 aa24.46■■□□□ 1.51
STRADA-204ENST00000392950 SHROOM4Q9ULL8 1493 aa24.37■■□□□ 1.49
STRADA-204ENST00000392950 DCAF1Q9Y4B6 1507 aa24.28■■□□□ 1.48
STRADA-204ENST00000392950 ABCC9O60706 1549 aa24.18■■□□□ 1.46
STRADA-204ENST00000392950 MYO15BQ96JP2 1530 aa23.9■■□□□ 1.42
STRADA-204ENST00000392950 NACADO15069 1562 aa23.76■■□□□ 1.39
STRADA-204ENST00000392950 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
STRADA-204ENST00000392950 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
STRADA-204ENST00000392950 SUPT5HO00267 1087 aaKnown RBP23.51■■□□□ 1.35
STRADA-204ENST00000392950 UNC13AQ9UPW8 1703 aa23.18■■□□□ 1.3
STRADA-204ENST00000392950 CECR2Q9BXF3 1484 aa23.01■■□□□ 1.27
STRADA-204ENST00000392950 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
STRADA-204ENST00000392950 BICRAQ9NZM4 1560 aa22.91■■□□□ 1.26
STRADA-204ENST00000392950 PABPN1Q86U42 306 aaKnown RBP eCLIP22.89■■□□□ 1.26
STRADA-204ENST00000392950 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
STRADA-204ENST00000392950 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
STRADA-204ENST00000392950 WIZO95785 1651 aa22.7■■□□□ 1.22
STRADA-204ENST00000392950 SMARCA4P51532 1647 aa22.64■■□□□ 1.21
STRADA-204ENST00000392950 CHIC1Q5VXU3 224 aa22.55■■□□□ 1.2
STRADA-204ENST00000392950 TOP2AP11388 1531 aaKnown RBP22.37■■□□□ 1.17
STRADA-204ENST00000392950 PEG3Q9GZU2 1588 aa22.3■■□□□ 1.16
STRADA-204ENST00000392950 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
STRADA-204ENST00000392950 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
STRADA-204ENST00000392950 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
STRADA-204ENST00000392950 EIF4G1Q04637 1599 aaKnown RBP22.18■■□□□ 1.14
STRADA-204ENST00000392950 BAZ1BQ9UIG0 1483 aaKnown RBP22.11■■□□□ 1.13
STRADA-204ENST00000392950 TRIM41Q8WV44 630 aa22.01■■□□□ 1.11
STRADA-204ENST00000392950 NCAPD3P42695 1498 aa21.97■■□□□ 1.11
STRADA-204ENST00000392950 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
STRADA-204ENST00000392950 ABCC8Q09428 1581 aa21.86■■□□□ 1.09
STRADA-204ENST00000392950 CC2D2AQ9P2K1 1620 aa21.84■■□□□ 1.09
STRADA-204ENST00000392950 LOC105371045A0A1W2PR82 267 aa21.78■■□□□ 1.08
STRADA-204ENST00000392950 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
STRADA-204ENST00000392950 WRNQ14191 1432 aaPredicted RBP eCLIP21.61■■□□□ 1.05
STRADA-204ENST00000392950 SYNJ1O43426 1573 aa21.56■■□□□ 1.04
STRADA-204ENST00000392950 CFTRP13569 1480 aa21.55■■□□□ 1.04
STRADA-204ENST00000392950 EHMT2Q96KQ7 1210 aa21.5■■□□□ 1.03
STRADA-204ENST00000392950 SOGA1O94964 1423 aa21.48■■□□□ 1.03
STRADA-204ENST00000392950 CADPSQ9ULU8 1353 aa21.45■■□□□ 1.02
STRADA-204ENST00000392950 RUSC2Q8N2Y8 1516 aa21.42■■□□□ 1.02
STRADA-204ENST00000392950 DNAJC5BQ9UF47 199 aa21.42■■□□□ 1.02
STRADA-204ENST00000392950 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
STRADA-204ENST00000392950 TOP2BQ02880 1626 aa21.39■■□□□ 1.02
STRADA-204ENST00000392950 BIVM-ERCC5R4GMW8 1640 aa21.36■■□□□ 1.01
STRADA-204ENST00000392950 CUX1P39880 1505 aa21.34■■□□□ 1.01
STRADA-204ENST00000392950 NESP48681 1621 aa21.31■■□□□ 1
STRADA-204ENST00000392950 EEA1Q15075 1411 aa21.29■■□□□ 1
STRADA-204ENST00000392950 CSRNP3Q8WYN3 585 aa21.28■■□□□ 1
STRADA-204ENST00000392950 FANCD2Q9BXW9 1451 aa21.23■□□□□ 0.99
STRADA-204ENST00000392950 LAMC3Q9Y6N6 1575 aa21.17■□□□□ 0.98
STRADA-204ENST00000392950 GOLGA3Q08378 1498 aa21.08■□□□□ 0.97
STRADA-204ENST00000392950 FGD5Q6ZNL6 1462 aa21.07■□□□□ 0.96
STRADA-204ENST00000392950 KIF21BO75037 1637 aa21.06■□□□□ 0.96
STRADA-204ENST00000392950 UBTFP17480 764 aaKnown RBP21.06■□□□□ 0.96
STRADA-204ENST00000392950 CEP164Q9UPV0 1460 aa21.06■□□□□ 0.96
STRADA-204ENST00000392950 TNIKQ9UKE5 1360 aa21.06■□□□□ 0.96
STRADA-204ENST00000392950 DNMBPQ6XZF7 1577 aa21.03■□□□□ 0.96
STRADA-204ENST00000392950 TOPBP1Q92547 1522 aa21.02■□□□□ 0.96
STRADA-204ENST00000392950 KIF27Q86VH2 1401 aa21.02■□□□□ 0.95
STRADA-204ENST00000392950 PDS5BQ9NTI5 1447 aa21.01■□□□□ 0.95
STRADA-204ENST00000392950 RAPGEF2Q9Y4G8 1499 aa21.01■□□□□ 0.95
STRADA-204ENST00000392950 CEP162Q5TB80 1403 aa21■□□□□ 0.95
STRADA-204ENST00000392950 KIF21AQ7Z4S6 1674 aa21■□□□□ 0.95
STRADA-204ENST00000392950 URB2Q14146 1524 aaKnown RBP20.98■□□□□ 0.95
STRADA-204ENST00000392950 CUX2O14529 1486 aa20.97■□□□□ 0.95
STRADA-204ENST00000392950 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
STRADA-204ENST00000392950 PRXQ9BXM0 1461 aa20.94■□□□□ 0.94
STRADA-204ENST00000392950 RAD54L2Q9Y4B4 1467 aa20.93■□□□□ 0.94
STRADA-204ENST00000392950 PCGF6Q9BYE7 350 aa20.93■□□□□ 0.94
STRADA-204ENST00000392950 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
STRADA-204ENST00000392950 IGF1RP08069 1367 aa20.87■□□□□ 0.93
STRADA-204ENST00000392950 ABCA10Q8WWZ4 1543 aa20.84■□□□□ 0.93
STRADA-204ENST00000392950 PPARGC1BQ86YN6 1023 aaKnown RBP20.8■□□□□ 0.92
STRADA-204ENST00000392950 RANGAP1P46060 587 aaPredicted RBP20.79■□□□□ 0.92
STRADA-204ENST00000392950 CLIP1P30622 1438 aa20.79■□□□□ 0.92
STRADA-204ENST00000392950 TRIM26Q12899 539 aaPredicted RBP20.79■□□□□ 0.92
STRADA-204ENST00000392950 WDR97A6NE52 1622 aa20.77■□□□□ 0.92
STRADA-204ENST00000392950 MRC2Q9UBG0 1479 aa20.76■□□□□ 0.91
STRADA-204ENST00000392950 CARMIL1Q5VZK9 1371 aa20.75■□□□□ 0.91
STRADA-204ENST00000392950 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
STRADA-204ENST00000392950 TARBP1Q13395 1621 aaKnown RBP20.69■□□□□ 0.9
STRADA-204ENST00000392950 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
STRADA-204ENST00000392950 ERCC6Q03468 1493 aa20.65■□□□□ 0.9
STRADA-204ENST00000392950 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
STRADA-204ENST00000392950 WDR62O43379 1518 aa20.63■□□□□ 0.89
STRADA-204ENST00000392950 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
STRADA-204ENST00000392950 CUL7Q14999 1698 aa20.6■□□□□ 0.89
STRADA-204ENST00000392950 TTBK1Q5TCY1 1321 aaPredicted RBP20.6■□□□□ 0.89
STRADA-204ENST00000392950 ARAP1Q96P48 1450 aa20.58■□□□□ 0.89
STRADA-204ENST00000392950 THOC2Q8NI27 1593 aaKnown RBP20.56■□□□□ 0.88
STRADA-204ENST00000392950 AQRO60306 1485 aaKnown RBP eCLIP20.55■□□□□ 0.884e-7■■■■■ 28.2
STRADA-204ENST00000392950 ARHGAP35Q9NRY4 1499 aa20.55■□□□□ 0.88
STRADA-204ENST00000392950 HRCP23327 699 aa20.52■□□□□ 0.88
STRADA-204ENST00000392950 ZNF608Q9ULD9 1512 aaPredicted RBP20.51■□□□□ 0.87
STRADA-204ENST00000392950 IFT140Q96RY7 1462 aa20.51■□□□□ 0.87
STRADA-204ENST00000392950 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
STRADA-204ENST00000392950 CTTNBP2Q8WZ74 1663 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms