RNA–Protein interactions for RNA: ENST00000392712.7

TUFT1-204, Transcript of tuftelin 1, humanhuman

TSL 5 BASIC

Gene TUFT1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-204ENST00000392712 NISCHQ9Y2I1 1504 aa22.94■■□□□ 1.26
TUFT1-204ENST00000392712 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
TUFT1-204ENST00000392712 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
TUFT1-204ENST00000392712 HRCP23327 699 aa19.73■□□□□ 0.75
TUFT1-204ENST00000392712 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
TUFT1-204ENST00000392712 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
TUFT1-204ENST00000392712 MYO15BQ96JP2 1530 aa19.43■□□□□ 0.7
TUFT1-204ENST00000392712 CCDC180Q9P1Z9 1646 aa19.38■□□□□ 0.69
TUFT1-204ENST00000392712 PPARGC1BQ86YN6 1023 aaKnown RBP19.37■□□□□ 0.69
TUFT1-204ENST00000392712 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.69
TUFT1-204ENST00000392712 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
TUFT1-204ENST00000392712 DCAF1Q9Y4B6 1507 aa18.96■□□□□ 0.63
TUFT1-204ENST00000392712 LOC105371045A0A1W2PR82 267 aa18.9■□□□□ 0.62
TUFT1-204ENST00000392712 PELP1Q8IZL8 1130 aaKnown RBP18.82■□□□□ 0.6
TUFT1-204ENST00000392712 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
TUFT1-204ENST00000392712 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
TUFT1-204ENST00000392712 ZEB1P37275 1124 aaPredicted RBP18.6■□□□□ 0.57
TUFT1-204ENST00000392712 ABCC9O60706 1549 aa18.38■□□□□ 0.53
TUFT1-204ENST00000392712 FAM9AQ8IZU1 332 aaPredicted RBP18.26■□□□□ 0.51
TUFT1-204ENST00000392712 RSF1Q96T23 1441 aaPredicted RBP18.25■□□□□ 0.51
TUFT1-204ENST00000392712 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
TUFT1-204ENST00000392712 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.51
TUFT1-204ENST00000392712 SCRIBQ14160 1630 aa18.21■□□□□ 0.5
TUFT1-204ENST00000392712 ACIN1Q9UKV3 1341 aaKnown RBP18.19■□□□□ 0.5
TUFT1-204ENST00000392712 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
TUFT1-204ENST00000392712 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.48
TUFT1-204ENST00000392712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
TUFT1-204ENST00000392712 GTF3C3Q9Y5Q9 886 aa18.06■□□□□ 0.48
TUFT1-204ENST00000392712 MYT1Q01538 1121 aa18.03■□□□□ 0.48
TUFT1-204ENST00000392712 CCER1Q8TC90 406 aaPredicted RBP18.03■□□□□ 0.48
TUFT1-204ENST00000392712 CENPBP07199 599 aaPredicted RBP18■□□□□ 0.47
TUFT1-204ENST00000392712 DIEXFQ68CQ4 756 aaKnown RBP17.97■□□□□ 0.47
TUFT1-204ENST00000392712 NACADO15069 1562 aa17.88■□□□□ 0.45
TUFT1-204ENST00000392712 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
TUFT1-204ENST00000392712 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
TUFT1-204ENST00000392712 TTBK1Q5TCY1 1321 aaPredicted RBP17.76■□□□□ 0.43
TUFT1-204ENST00000392712 WIZO95785 1651 aa17.74■□□□□ 0.43
TUFT1-204ENST00000392712 YTHDC1Q96MU7 727 aaKnown RBP17.71■□□□□ 0.43
TUFT1-204ENST00000392712 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
TUFT1-204ENST00000392712 ZNF316A6NFI3 1004 aaPredicted RBP17.64■□□□□ 0.41
TUFT1-204ENST00000392712 EIF4G1Q04637 1599 aaKnown RBP17.61■□□□□ 0.41
TUFT1-204ENST00000392712 MIER1Q8N108 512 aa17.52■□□□□ 0.4
TUFT1-204ENST00000392712 WRNQ14191 1432 aaPredicted RBP eCLIP17.52■□□□□ 0.39
TUFT1-204ENST00000392712 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
TUFT1-204ENST00000392712 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
TUFT1-204ENST00000392712 ABCC8Q09428 1581 aa17.43■□□□□ 0.38
TUFT1-204ENST00000392712 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
TUFT1-204ENST00000392712 SMARCA4P51532 1647 aa17.41■□□□□ 0.38
TUFT1-204ENST00000392712 SMARCA2P51531 1590 aa17.39■□□□□ 0.37
TUFT1-204ENST00000392712 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
TUFT1-204ENST00000392712 UBTFP17480 764 aaKnown RBP17.34■□□□□ 0.37
TUFT1-204ENST00000392712 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
TUFT1-204ENST00000392712 SOGA1O94964 1423 aa17.33■□□□□ 0.37
TUFT1-204ENST00000392712 EEA1Q15075 1411 aa17.3■□□□□ 0.36
TUFT1-204ENST00000392712 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
TUFT1-204ENST00000392712 UNC13AQ9UPW8 1703 aa17.23■□□□□ 0.35
TUFT1-204ENST00000392712 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
TUFT1-204ENST00000392712 SUPT16HQ9Y5B9 1047 aaKnown RBP17.21■□□□□ 0.35
TUFT1-204ENST00000392712 GOLGA3Q08378 1498 aa17.19■□□□□ 0.34
TUFT1-204ENST00000392712 CLSPNQ9HAW4 1339 aa17.14■□□□□ 0.33
TUFT1-204ENST00000392712 TSHZ2Q9NRE2 1034 aa17.09■□□□□ 0.33
TUFT1-204ENST00000392712 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
TUFT1-204ENST00000392712 PEG3Q9GZU2 1588 aa17.07■□□□□ 0.32
TUFT1-204ENST00000392712 PABPN1Q86U42 306 aaKnown RBP eCLIP17.07■□□□□ 0.32
TUFT1-204ENST00000392712 ANP32EQ9BTT0 268 aa17.07■□□□□ 0.32
TUFT1-204ENST00000392712 APLP2Q06481 763 aa17.06■□□□□ 0.32
TUFT1-204ENST00000392712 BICRAQ9NZM4 1560 aa17.05■□□□□ 0.32
TUFT1-204ENST00000392712 CLIP1P30622 1438 aa17.04■□□□□ 0.32
TUFT1-204ENST00000392712 KIF21BO75037 1637 aa17.03■□□□□ 0.32
TUFT1-204ENST00000392712 SYNJ1O43426 1573 aa17.02■□□□□ 0.32
TUFT1-204ENST00000392712 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
TUFT1-204ENST00000392712 VPS8Q8N3P4 1428 aa16.99■□□□□ 0.31
TUFT1-204ENST00000392712 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
TUFT1-204ENST00000392712 BAZ1BQ9UIG0 1483 aaKnown RBP16.94■□□□□ 0.3
TUFT1-204ENST00000392712 BCL11AQ9H165 835 aa16.94■□□□□ 0.3
TUFT1-204ENST00000392712 ATAD2BQ9ULI0 1458 aa16.93■□□□□ 0.3
TUFT1-204ENST00000392712 BCANQ96GW7 911 aa16.91■□□□□ 0.3
TUFT1-204ENST00000392712 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
TUFT1-204ENST00000392712 KCNH8Q96L42 1107 aa16.86■□□□□ 0.29
TUFT1-204ENST00000392712 FKBP8Q14318 412 aa16.8■□□□□ 0.28
TUFT1-204ENST00000392712 TOP2BQ02880 1626 aa16.8■□□□□ 0.28
TUFT1-204ENST00000392712 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
TUFT1-204ENST00000392712 BIVM-ERCC5R4GMW8 1640 aa16.73■□□□□ 0.27
TUFT1-204ENST00000392712 ERICH3Q5RHP9 1530 aa16.73■□□□□ 0.27
TUFT1-204ENST00000392712 PRXQ9BXM0 1461 aa16.72■□□□□ 0.27
TUFT1-204ENST00000392712 ITGAEP38570 1179 aa16.71■□□□□ 0.27
TUFT1-204ENST00000392712 RBM19Q9Y4C8 960 aaKnown RBP16.71■□□□□ 0.27
TUFT1-204ENST00000392712 ARAP1Q96P48 1450 aa16.69■□□□□ 0.26
TUFT1-204ENST00000392712 NEFLP07196 543 aa16.69■□□□□ 0.26
TUFT1-204ENST00000392712 DDX10Q13206 875 aaKnown RBP16.66■□□□□ 0.26
TUFT1-204ENST00000392712 RRBP1Q9P2E9 1410 aaKnown RBP16.65■□□□□ 0.26
TUFT1-204ENST00000392712 CCNB3Q8WWL7 1395 aa16.62■□□□□ 0.25
TUFT1-204ENST00000392712 CUX2O14529 1486 aa16.61■□□□□ 0.25
TUFT1-204ENST00000392712 TRIM52Q96A61 297 aa16.61■□□□□ 0.25
TUFT1-204ENST00000392712 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
TUFT1-204ENST00000392712 CUX1P39880 1505 aa16.59■□□□□ 0.25
TUFT1-204ENST00000392712 RAB3GAP2Q9H2M9 1393 aa16.58■□□□□ 0.24
TUFT1-204ENST00000392712 NCAPD3P42695 1498 aa16.56■□□□□ 0.24
TUFT1-204ENST00000392712 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
TUFT1-204ENST00000392712 MAPKBP1O60336 1514 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 218.5 ms