RNA–Protein interactions for RNA: ENST00000392407.6

MUC4-205, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,645 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-205ENST00000392407 NISCHQ9Y2I1 1504 aa21.9■■□□□ 1.1
MUC4-205ENST00000392407 SHROOM4Q9ULL8 1493 aa19.8■□□□□ 0.76
MUC4-205ENST00000392407 SUPT5HO00267 1087 aaKnown RBP19.76■□□□□ 0.75
MUC4-205ENST00000392407 HRCP23327 699 aa19.46■□□□□ 0.71
MUC4-205ENST00000392407 PCGF6Q9BYE7 350 aa19.37■□□□□ 0.69
MUC4-205ENST00000392407 PPARGC1BQ86YN6 1023 aaKnown RBP19.19■□□□□ 0.66
MUC4-205ENST00000392407 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.64
MUC4-205ENST00000392407 DCAF8L2P0C7V8 631 aa19.04■□□□□ 0.64
MUC4-205ENST00000392407 MYO15BQ96JP2 1530 aa18.96■□□□□ 0.63
MUC4-205ENST00000392407 LOC105371045A0A1W2PR82 267 aa18.76■□□□□ 0.59
MUC4-205ENST00000392407 PELP1Q8IZL8 1130 aaKnown RBP18.65■□□□□ 0.58
MUC4-205ENST00000392407 TRIM26Q12899 539 aaPredicted RBP18.63■□□□□ 0.57
MUC4-205ENST00000392407 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
MUC4-205ENST00000392407 DCAF1Q9Y4B6 1507 aa18.53■□□□□ 0.56
MUC4-205ENST00000392407 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
MUC4-205ENST00000392407 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
MUC4-205ENST00000392407 FAM9AQ8IZU1 332 aaPredicted RBP18.36■□□□□ 0.53
MUC4-205ENST00000392407 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.52
MUC4-205ENST00000392407 CCDC180Q9P1Z9 1646 aa18.22■□□□□ 0.51
MUC4-205ENST00000392407 TRIM41Q8WV44 630 aa18.21■□□□□ 0.51
MUC4-205ENST00000392407 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
MUC4-205ENST00000392407 CENPBP07199 599 aaPredicted RBP18■□□□□ 0.47
MUC4-205ENST00000392407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
MUC4-205ENST00000392407 ACIN1Q9UKV3 1341 aaKnown RBP17.99■□□□□ 0.47
MUC4-205ENST00000392407 NEUROD1Q13562 356 aa17.95■□□□□ 0.46
MUC4-205ENST00000392407 TTBK1Q5TCY1 1321 aaPredicted RBP17.94■□□□□ 0.46
MUC4-205ENST00000392407 GTF3C3Q9Y5Q9 886 aa17.94■□□□□ 0.46
MUC4-205ENST00000392407 MYT1Q01538 1121 aa17.89■□□□□ 0.45
MUC4-205ENST00000392407 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
MUC4-205ENST00000392407 YTHDC1Q96MU7 727 aaKnown RBP17.79■□□□□ 0.44
MUC4-205ENST00000392407 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
MUC4-205ENST00000392407 ABCC9O60706 1549 aa17.58■□□□□ 0.4
MUC4-205ENST00000392407 RB1CC1Q8TDY2 1594 aa17.54■□□□□ 0.4
MUC4-205ENST00000392407 SCRIBQ14160 1630 aa17.52■□□□□ 0.4
MUC4-205ENST00000392407 ZNF316A6NFI3 1004 aaPredicted RBP17.5■□□□□ 0.39
MUC4-205ENST00000392407 UBTFP17480 764 aaKnown RBP17.41■□□□□ 0.38
MUC4-205ENST00000392407 HNRNPUL2Q1KMD3 747 aaKnown RBP17.38■□□□□ 0.37
MUC4-205ENST00000392407 MIER1Q8N108 512 aa17.36■□□□□ 0.37
MUC4-205ENST00000392407 CECR2Q9BXF3 1484 aa17.23■□□□□ 0.35
MUC4-205ENST00000392407 APLP2Q06481 763 aa17.22■□□□□ 0.35
MUC4-205ENST00000392407 CEP162Q5TB80 1403 aa17.21■□□□□ 0.35
MUC4-205ENST00000392407 RANGAP1P46060 587 aaPredicted RBP17.21■□□□□ 0.35
MUC4-205ENST00000392407 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
MUC4-205ENST00000392407 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
MUC4-205ENST00000392407 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.32
MUC4-205ENST00000392407 WIZO95785 1651 aa17.06■□□□□ 0.32
MUC4-205ENST00000392407 TNIKQ9UKE5 1360 aa17.05■□□□□ 0.32
MUC4-205ENST00000392407 CCDC88BA6NC98 1476 aa17.04■□□□□ 0.32
MUC4-205ENST00000392407 SOGA1O94964 1423 aa17.03■□□□□ 0.32
MUC4-205ENST00000392407 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
MUC4-205ENST00000392407 SUPT16HQ9Y5B9 1047 aaKnown RBP17■□□□□ 0.31
MUC4-205ENST00000392407 BCANQ96GW7 911 aa16.96■□□□□ 0.31
MUC4-205ENST00000392407 CLSPNQ9HAW4 1339 aa16.93■□□□□ 0.3
MUC4-205ENST00000392407 GOLGA3Q08378 1498 aa16.89■□□□□ 0.29
MUC4-205ENST00000392407 ANP32EQ9BTT0 268 aa16.88■□□□□ 0.29
MUC4-205ENST00000392407 RUSC2Q8N2Y8 1516 aa16.88■□□□□ 0.29
MUC4-205ENST00000392407 TSHZ2Q9NRE2 1034 aa16.86■□□□□ 0.29
MUC4-205ENST00000392407 EEA1Q15075 1411 aa16.86■□□□□ 0.29
MUC4-205ENST00000392407 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
MUC4-205ENST00000392407 ITGAEP38570 1179 aa16.84■□□□□ 0.29
MUC4-205ENST00000392407 CLIP1P30622 1438 aa16.84■□□□□ 0.29
MUC4-205ENST00000392407 NEFLP07196 543 aa16.81■□□□□ 0.28
MUC4-205ENST00000392407 NACADO15069 1562 aa16.78■□□□□ 0.28
MUC4-205ENST00000392407 FKBP8Q14318 412 aa16.77■□□□□ 0.27
MUC4-205ENST00000392407 BCL11AQ9H165 835 aa16.76■□□□□ 0.27
MUC4-205ENST00000392407 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
MUC4-205ENST00000392407 VPS8Q8N3P4 1428 aa16.7■□□□□ 0.26
MUC4-205ENST00000392407 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
MUC4-205ENST00000392407 EIF4G1Q04637 1599 aaKnown RBP16.7■□□□□ 0.26
MUC4-205ENST00000392407 KCNH8Q96L42 1107 aa16.68■□□□□ 0.26
MUC4-205ENST00000392407 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
MUC4-205ENST00000392407 ERICH6Q7L0X2 663 aa16.64■□□□□ 0.25
MUC4-205ENST00000392407 DDX10Q13206 875 aaKnown RBP16.64■□□□□ 0.25
MUC4-205ENST00000392407 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
MUC4-205ENST00000392407 TRIM52Q96A61 297 aa16.58■□□□□ 0.25
MUC4-205ENST00000392407 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
MUC4-205ENST00000392407 KANK4Q5T7N3 995 aaPredicted RBP16.56■□□□□ 0.24
MUC4-205ENST00000392407 RBM19Q9Y4C8 960 aaKnown RBP16.55■□□□□ 0.24
MUC4-205ENST00000392407 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
MUC4-205ENST00000392407 SMARCA4P51532 1647 aa16.53■□□□□ 0.24
MUC4-205ENST00000392407 HIRIP3Q9BW71 556 aaPredicted RBP16.52■□□□□ 0.24
MUC4-205ENST00000392407 ANP32CO43423 234 aa16.49■□□□□ 0.23
MUC4-205ENST00000392407 ATP1B4Q9UN42 357 aaPredicted RBP16.48■□□□□ 0.23
MUC4-205ENST00000392407 FAM50AQ14320 339 aaKnown RBP16.46■□□□□ 0.23
MUC4-205ENST00000392407 KIF21BO75037 1637 aa16.45■□□□□ 0.22
MUC4-205ENST00000392407 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
MUC4-205ENST00000392407 SIN3AQ96ST3 1273 aa16.42■□□□□ 0.22
MUC4-205ENST00000392407 CCNB3Q8WWL7 1395 aa16.42■□□□□ 0.22
MUC4-205ENST00000392407 IRX6P78412 446 aaPredicted RBP16.42■□□□□ 0.22
MUC4-205ENST00000392407 CDK11AQ9UQ88 783 aaPredicted RBP16.41■□□□□ 0.22
MUC4-205ENST00000392407 SYNJ1O43426 1573 aa16.4■□□□□ 0.22
MUC4-205ENST00000392407 PRKCSHP14314 528 aaPredicted RBP16.39■□□□□ 0.21
MUC4-205ENST00000392407 RAB3GAP2Q9H2M9 1393 aa16.36■□□□□ 0.21
MUC4-205ENST00000392407 HNRNPUQ00839 825 aaKnown RBP eCLIP16.34■□□□□ 0.21
MUC4-205ENST00000392407 CCER2I3L3R5 266 aa16.27■□□□□ 0.2
MUC4-205ENST00000392407 RRBP1Q9P2E9 1410 aaKnown RBP16.27■□□□□ 0.2
MUC4-205ENST00000392407 ARAP1Q96P48 1450 aa16.27■□□□□ 0.19
MUC4-205ENST00000392407 MSH5O43196 834 aa16.25■□□□□ 0.19
MUC4-205ENST00000392407 P3H3Q8IVL6 736 aa16.24■□□□□ 0.19
MUC4-205ENST00000392407 SETD5Q9C0A6 1442 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms