RNA–Protein interactions for RNA: ENST00000391064.1

RNU6-1246P-201, Transcript of RNA, U6 small nuclear 1246, pseudogene, humanhuman

BASIC

Gene RNU6-1246P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1246P-201ENST00000391064 POTEDQ86YR6 584 aa5.92□□□□□ -1.46
RNU6-1246P-201ENST00000391064 AEBP2Q6ZN18 517 aaPredicted RBP5.86□□□□□ -1.47
RNU6-1246P-201ENST00000391064 CHIC1Q5VXU3 224 aa5.7□□□□□ -1.5
RNU6-1246P-201ENST00000391064 SENP3Q9H4L4 574 aaPredicted RBP5.32□□□□□ -1.56
RNU6-1246P-201ENST00000391064 PHF23Q9BUL5 403 aaPredicted RBP5.05□□□□□ -1.6
RNU6-1246P-201ENST00000391064 MSH5O43196 834 aa5.02□□□□□ -1.61
RNU6-1246P-201ENST00000391064 FOXD1Q16676 465 aa4.9□□□□□ -1.63
RNU6-1246P-201ENST00000391064 CACNB1Q02641 598 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1246P-201ENST00000391064 POTEHQ6S545 545 aa4.55□□□□□ -1.68
RNU6-1246P-201ENST00000391064 PIAS4Q8N2W9 510 aaPredicted RBP4.52□□□□□ -1.69
RNU6-1246P-201ENST00000391064 RNF39Q9H2S5 420 aa4.12□□□□□ -1.75
RNU6-1246P-201ENST00000391064 C1QBPQ07021 282 aaKnown RBP4.1□□□□□ -1.75
RNU6-1246P-201ENST00000391064 PLSCR2Q9NRY7 297 aa4.1□□□□□ -1.75
RNU6-1246P-201ENST00000391064 DMRT2Q9Y5R5 561 aa4.05□□□□□ -1.76
RNU6-1246P-201ENST00000391064 DCAF8L1A6NGE4 600 aa4□□□□□ -1.77
RNU6-1246P-201ENST00000391064 ADRA2BP18089 450 aa3.98□□□□□ -1.77
RNU6-1246P-201ENST00000391064 PPP6R1Q9UPN7 881 aa3.97□□□□□ -1.77
RNU6-1246P-201ENST00000391064 SP7Q8TDD2 431 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1246P-201ENST00000391064 SCAF1Q9H7N4 1312 aaKnown RBP3.87□□□□□ -1.79
RNU6-1246P-201ENST00000391064 MAPK8IP2Q13387 824 aaPredicted RBP3.81□□□□□ -1.8
RNU6-1246P-201ENST00000391064 PLPPR3Q6T4P5 718 aa3.79□□□□□ -1.8
RNU6-1246P-201ENST00000391064 CHRDL2Q6WN34 429 aa3.72□□□□□ -1.81
RNU6-1246P-201ENST00000391064 LHX8Q68G74 356 aa3.7□□□□□ -1.82
RNU6-1246P-201ENST00000391064 DNAJC5BQ9UF47 199 aa3.7□□□□□ -1.82
RNU6-1246P-201ENST00000391064 HAX1O00165 279 aa3.64□□□□□ -1.83
RNU6-1246P-201ENST00000391064 RBM42Q9BTD8 480 aaKnown RBP3.63□□□□□ -1.83
RNU6-1246P-201ENST00000391064 HOXD11P31277 338 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1246P-201ENST00000391064 DSG3P32926 999 aa3.61□□□□□ -1.83
RNU6-1246P-201ENST00000391064 PCDH10Q9P2E7 1040 aa3.61□□□□□ -1.83
RNU6-1246P-201ENST00000391064 CAPN15O75808 1086 aa3.56□□□□□ -1.84
RNU6-1246P-201ENST00000391064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.54□□□□□ -1.84
RNU6-1246P-201ENST00000391064 POTEMA6NI47 508 aa3.53□□□□□ -1.84
RNU6-1246P-201ENST00000391064 POTEGQ6S5H5 508 aa3.49□□□□□ -1.85
RNU6-1246P-201ENST00000391064 RNF216Q9NWF9 866 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1246P-201ENST00000391064 PIP4P2Q8N4L2 257 aa3.43□□□□□ -1.86
RNU6-1246P-201ENST00000391064 SPINK5Q9NQ38 1064 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1246P-201ENST00000391064 APLP2Q06481 763 aa3.37□□□□□ -1.87
RNU6-1246P-201ENST00000391064 ZNF219Q9P2Y4 722 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1246P-201ENST00000391064 ABCB7O75027 752 aa3.34□□□□□ -1.87
RNU6-1246P-201ENST00000391064 GABBR2O75899 941 aa3.34□□□□□ -1.87
RNU6-1246P-201ENST00000391064 EVX2Q03828 476 aa3.34□□□□□ -1.87
RNU6-1246P-201ENST00000391064 AKT1S1Q96B36 256 aa3.32□□□□□ -1.88
RNU6-1246P-201ENST00000391064 TRHP20396 242 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1246P-201ENST00000391064 CNKSR2Q8WXI2 1034 aa3.31□□□□□ -1.88
RNU6-1246P-201ENST00000391064 FXR2P51116 673 aaKnown RBP eCLIP3.3□□□□□ -1.88
RNU6-1246P-201ENST00000391064 U3KPZ7 1027 aaPredicted RBP3.27□□□□□ -1.89
RNU6-1246P-201ENST00000391064 REM2Q8IYK8 340 aaPredicted RBP3.24□□□□□ -1.89
RNU6-1246P-201ENST00000391064 OTUD5Q96G74 571 aa3.24□□□□□ -1.89
RNU6-1246P-201ENST00000391064 CLCN6P51797 869 aa3.23□□□□□ -1.89
RNU6-1246P-201ENST00000391064 DCBLD2Q96PD2 775 aa3.23□□□□□ -1.89
RNU6-1246P-201ENST00000391064 C19orf67A6NJJ6 358 aa3.22□□□□□ -1.89
RNU6-1246P-201ENST00000391064 CDAN1Q8IWY9 1227 aa3.22□□□□□ -1.89
RNU6-1246P-201ENST00000391064 PITPNM1O00562 1244 aa3.2□□□□□ -1.9
RNU6-1246P-201ENST00000391064 MMRN1Q13201 1228 aa3.19□□□□□ -1.9
RNU6-1246P-201ENST00000391064 POTEIP0CG38 1075 aa3.17□□□□□ -1.9
RNU6-1246P-201ENST00000391064 FAM163AQ96GL9 167 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1246P-201ENST00000391064 MAMSTRQ6ZN01 415 aa3.16□□□□□ -1.9
RNU6-1246P-201ENST00000391064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.15□□□□□ -1.91
RNU6-1246P-201ENST00000391064 PRKAR2AP13861 404 aaKnown RBP3.15□□□□□ -1.91
RNU6-1246P-201ENST00000391064 HNRNPUL2Q1KMD3 747 aaKnown RBP3.15□□□□□ -1.91
RNU6-1246P-201ENST00000391064 PPP4R3CPQ6ZMV5 832 aa3.15□□□□□ -1.91
RNU6-1246P-201ENST00000391064 SPNS2Q8IVW8 549 aa3.11□□□□□ -1.91
RNU6-1246P-201ENST00000391064 SCUBE2Q9NQ36 999 aa3.09□□□□□ -1.91
RNU6-1246P-201ENST00000391064 ZBTB12Q9Y330 459 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1246P-201ENST00000391064 LCE2DQ5TA82 110 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1246P-201ENST00000391064 SAMD1Q6SPF0 538 aaPredicted RBP3.05□□□□□ -1.92
RNU6-1246P-201ENST00000391064 POTEB2H3BUK9 544 aa3.04□□□□□ -1.92
RNU6-1246P-201ENST00000391064 POLA2Q14181 598 aa3.04□□□□□ -1.92
RNU6-1246P-201ENST00000391064 CD44P16070 742 aaKnown RBP3.03□□□□□ -1.92
RNU6-1246P-201ENST00000391064 SPDYE1Q8NFV5 336 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1246P-201ENST00000391064 CLEC11AQ9Y240 323 aa2.98□□□□□ -1.93
RNU6-1246P-201ENST00000391064 NCBP3Q53F19 620 aaKnown RBP2.97□□□□□ -1.93
RNU6-1246P-201ENST00000391064 OSCARQ8IYS5 282 aa2.97□□□□□ -1.93
RNU6-1246P-201ENST00000391064 C7P10643 843 aa2.95□□□□□ -1.94
RNU6-1246P-201ENST00000391064 SLC39A7Q92504 469 aa2.95□□□□□ -1.94
RNU6-1246P-201ENST00000391064 METRNQ9UJH8 293 aa2.95□□□□□ -1.94
RNU6-1246P-201ENST00000391064 ZNF579Q8NAF0 562 aaKnown RBP2.93□□□□□ -1.94
RNU6-1246P-201ENST00000391064 TMEM121BQ9BXQ6 578 aaPredicted RBP2.93□□□□□ -1.94
RNU6-1246P-201ENST00000391064 ST18O60284 1047 aa2.89□□□□□ -1.95
RNU6-1246P-201ENST00000391064 CHADLQ6NUI6 762 aa2.89□□□□□ -1.95
RNU6-1246P-201ENST00000391064 GALR2O43603 387 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1246P-201ENST00000391064 POTEJP0CG39 1038 aa2.87□□□□□ -1.95
RNU6-1246P-201ENST00000391064 RNF166Q96A37 237 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1246P-201ENST00000391064 ZRANB1Q9UGI0 708 aa2.87□□□□□ -1.95
RNU6-1246P-201ENST00000391064 ATF5Q9Y2D1 282 aaPredicted RBP2.85□□□□□ -1.95
RNU6-1246P-201ENST00000391064 SPDYE2BA6NHP3 402 aa2.84□□□□□ -1.95
RNU6-1246P-201ENST00000391064 PAK3O75914 559 aaPredicted RBP2.84□□□□□ -1.95
RNU6-1246P-201ENST00000391064 PRR29P0C7W0 189 aa2.84□□□□□ -1.95
RNU6-1246P-201ENST00000391064 SPDYE6P0CI01 402 aa2.84□□□□□ -1.95
RNU6-1246P-201ENST00000391064 SPDYE2Q495Y8 402 aa2.84□□□□□ -1.95
RNU6-1246P-201ENST00000391064 FARP1Q9Y4F1 1045 aaPredicted RBP2.84□□□□□ -1.95
RNU6-1246P-201ENST00000391064 SNPHO15079 494 aa2.83□□□□□ -1.96
RNU6-1246P-201ENST00000391064 PELP1Q8IZL8 1130 aaKnown RBP2.82□□□□□ -1.96
RNU6-1246P-201ENST00000391064 ASTLQ6HA08 431 aaPredicted RBP2.81□□□□□ -1.96
RNU6-1246P-201ENST00000391064 SLAIN1Q8ND83 568 aa2.8□□□□□ -1.96
RNU6-1246P-201ENST00000391064 EMP3P54852 163 aa2.79□□□□□ -1.96
RNU6-1246P-201ENST00000391064 MARVELD3Q96A59 401 aa2.78□□□□□ -1.96
RNU6-1246P-201ENST00000391064 IRX2Q9BZI1 471 aaPredicted RBP2.78□□□□□ -1.96
RNU6-1246P-201ENST00000391064 MYT1LQ9UL68 1186 aa2.78□□□□□ -1.96
RNU6-1246P-201ENST00000391064 ATMINO43313 823 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms