RNA–Protein interactions for RNA: ENST00000389044.8

TRIP12-203, Transcript of thyroid hormone receptor interactor 12, humanhuman

TSL 1 (best) BASIC

Gene TRIP12, Length 6,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP12-203ENST00000389044 NISCHQ9Y2I1 1504 aa19.5■□□□□ 0.71
TRIP12-203ENST00000389044 DCAF8L2P0C7V8 631 aa19.45■□□□□ 0.7
TRIP12-203ENST00000389044 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
TRIP12-203ENST00000389044 SHROOM4Q9ULL8 1493 aa18.09■□□□□ 0.49
TRIP12-203ENST00000389044 EHMT2Q96KQ7 1210 aa17.32■□□□□ 0.36
TRIP12-203ENST00000389044 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
TRIP12-203ENST00000389044 APLP2Q06481 763 aa17.03■□□□□ 0.32
TRIP12-203ENST00000389044 ABCC9O60706 1549 aa16.95■□□□□ 0.3
TRIP12-203ENST00000389044 TRIM41Q8WV44 630 aa16.89■□□□□ 0.29
TRIP12-203ENST00000389044 RANGAP1P46060 587 aaPredicted RBP16.75■□□□□ 0.27
TRIP12-203ENST00000389044 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.262e-6■■■■□ 23
TRIP12-203ENST00000389044 TTBK1Q5TCY1 1321 aaPredicted RBP16.64■□□□□ 0.25
TRIP12-203ENST00000389044 UBTFP17480 764 aaKnown RBP16.63■□□□□ 0.25
TRIP12-203ENST00000389044 ATP1B4Q9UN42 357 aaPredicted RBP16.63■□□□□ 0.25
TRIP12-203ENST00000389044 PCGF6Q9BYE7 350 aa16.34■□□□□ 0.21
TRIP12-203ENST00000389044 CCDC180Q9P1Z9 1646 aa16.28■□□□□ 0.2
TRIP12-203ENST00000389044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
TRIP12-203ENST00000389044 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
TRIP12-203ENST00000389044 CHIC1Q5VXU3 224 aa16.17■□□□□ 0.18
TRIP12-203ENST00000389044 CCER1Q8TC90 406 aaPredicted RBP16.15■□□□□ 0.18
TRIP12-203ENST00000389044 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
TRIP12-203ENST00000389044 SCRIBQ14160 1630 aa16.11■□□□□ 0.17
TRIP12-203ENST00000389044 PPARGC1BQ86YN6 1023 aaKnown RBP16.09■□□□□ 0.17
TRIP12-203ENST00000389044 MYT1LQ9UL68 1186 aa16.07■□□□□ 0.16
TRIP12-203ENST00000389044 ZEB1P37275 1124 aaPredicted RBP16.04■□□□□ 0.16
TRIP12-203ENST00000389044 LOC105371045A0A1W2PR82 267 aa16.02■□□□□ 0.15
TRIP12-203ENST00000389044 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.14
TRIP12-203ENST00000389044 ITGAEP38570 1179 aa15.94■□□□□ 0.14
TRIP12-203ENST00000389044 FBLN2P98095 1184 aa15.91■□□□□ 0.14
TRIP12-203ENST00000389044 PELP1Q8IZL8 1130 aaKnown RBP15.9■□□□□ 0.14
TRIP12-203ENST00000389044 TRIM26Q12899 539 aaPredicted RBP15.87■□□□□ 0.13
TRIP12-203ENST00000389044 NACADO15069 1562 aa15.8■□□□□ 0.12
TRIP12-203ENST00000389044 FAM50AQ14320 339 aaKnown RBP15.68■□□□□ 0.1
TRIP12-203ENST00000389044 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
TRIP12-203ENST00000389044 CENPBP07199 599 aaPredicted RBP15.61■□□□□ 0.09
TRIP12-203ENST00000389044 P3H3Q8IVL6 736 aa15.59■□□□□ 0.09
TRIP12-203ENST00000389044 POLR3GLQ9BT43 218 aa15.57■□□□□ 0.08
TRIP12-203ENST00000389044 TRIM52Q96A61 297 aa15.53■□□□□ 0.08
TRIP12-203ENST00000389044 ARID3CA6NKF2 412 aa15.52■□□□□ 0.07
TRIP12-203ENST00000389044 DCAF1Q9Y4B6 1507 aa15.49■□□□□ 0.07
TRIP12-203ENST00000389044 BAZ1BQ9UIG0 1483 aaKnown RBP15.47■□□□□ 0.07
TRIP12-203ENST00000389044 CDK11AQ9UQ88 783 aaPredicted RBP15.45■□□□□ 0.06
TRIP12-203ENST00000389044 RSF1Q96T23 1441 aaPredicted RBP15.45■□□□□ 0.06
TRIP12-203ENST00000389044 YTHDC1Q96MU7 727 aaKnown RBP15.42■□□□□ 0.06
TRIP12-203ENST00000389044 NPM1P06748 294 aaKnown RBP eCLIP15.4■□□□□ 0.06
TRIP12-203ENST00000389044 NEFLP07196 543 aa15.39■□□□□ 0.05
TRIP12-203ENST00000389044 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
TRIP12-203ENST00000389044 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
TRIP12-203ENST00000389044 ZNF777Q9ULD5 760 aaPredicted RBP15.37■□□□□ 0.05
TRIP12-203ENST00000389044 BAZ1AQ9NRL2 1556 aaPredicted RBP15.35■□□□□ 0.05
TRIP12-203ENST00000389044 HRCP23327 699 aa15.34■□□□□ 0.05
TRIP12-203ENST00000389044 CNGB1Q14028 1251 aaPredicted RBP15.34■□□□□ 0.05
TRIP12-203ENST00000389044 NEUROD1Q13562 356 aa15.33■□□□□ 0.04
TRIP12-203ENST00000389044 ERCC6Q03468 1493 aa15.28■□□□□ 0.04
TRIP12-203ENST00000389044 CECR2Q9BXF3 1484 aa15.26■□□□□ 0.03
TRIP12-203ENST00000389044 ZNF326Q5BKZ1 582 aaKnown RBP15.25■□□□□ 0.03
TRIP12-203ENST00000389044 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.03
TRIP12-203ENST00000389044 ESF1Q9H501 851 aaKnown RBP15.22■□□□□ 0.03
TRIP12-203ENST00000389044 BCANQ96GW7 911 aa15.19■□□□□ 0.02
TRIP12-203ENST00000389044 MYO15BQ96JP2 1530 aa15.14■□□□□ 0.01
TRIP12-203ENST00000389044 EEA1Q15075 1411 aa15.14■□□□□ 0.01
TRIP12-203ENST00000389044 ERICH6Q7L0X2 663 aa15.14■□□□□ 0.01
TRIP12-203ENST00000389044 KIF27Q86VH2 1401 aa15.13■□□□□ 0.01
TRIP12-203ENST00000389044 SMARCA2P51531 1590 aa15.11■□□□□ 0.01
TRIP12-203ENST00000389044 MTUS2Q5JR59 1369 aa15.09■□□□□ 0.01
TRIP12-203ENST00000389044 CLIP1P30622 1438 aa15.09■□□□□ 0.01
TRIP12-203ENST00000389044 MROH2BQ7Z745 1585 aa15.07■□□□□ 0
TRIP12-203ENST00000389044 GOLGA3Q08378 1498 aa15.06■□□□□ 0
TRIP12-203ENST00000389044 STAG3Q9UJ98 1225 aa15.05■□□□□ 0
TRIP12-203ENST00000389044 TSPY4P0CV99 314 aa15.05■□□□□ -0
TRIP12-203ENST00000389044 TSPY10P0CW01 314 aa15.05■□□□□ -0
TRIP12-203ENST00000389044 DIEXFQ68CQ4 756 aaKnown RBP15.04■□□□□ -0
TRIP12-203ENST00000389044 PLPPR3Q6T4P5 718 aa15.04■□□□□ -0
TRIP12-203ENST00000389044 CHGAP10645 457 aaKnown RBP15.03■□□□□ -0
TRIP12-203ENST00000389044 CHIC2Q9UKJ5 165 aa15.03■□□□□ -0
TRIP12-203ENST00000389044 PLEKHD1A6NEE1 506 aa15.02■□□□□ -0
TRIP12-203ENST00000389044 KCNH8Q96L42 1107 aa15.02■□□□□ -0
TRIP12-203ENST00000389044 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
TRIP12-203ENST00000389044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.014e-7■■□□□ 12.7
TRIP12-203ENST00000389044 CCDC88BA6NC98 1476 aa14.98□□□□□ -0.01
TRIP12-203ENST00000389044 CEP164Q9UPV0 1460 aa14.96□□□□□ -0.01
TRIP12-203ENST00000389044 ANP32CO43423 234 aa14.95□□□□□ -0.02
TRIP12-203ENST00000389044 CUX2O14529 1486 aa14.94□□□□□ -0.02
TRIP12-203ENST00000389044 CEP162Q5TB80 1403 aa14.93□□□□□ -0.02
TRIP12-203ENST00000389044 TONSLQ96HA7 1378 aa14.92□□□□□ -0.02
TRIP12-203ENST00000389044 CARMIL1Q5VZK9 1371 aa14.9□□□□□ -0.02
TRIP12-203ENST00000389044 TNIKQ9UKE5 1360 aa14.88□□□□□ -0.03
TRIP12-203ENST00000389044 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
TRIP12-203ENST00000389044 ZNF316A6NFI3 1004 aaPredicted RBP14.87□□□□□ -0.03
TRIP12-203ENST00000389044 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
TRIP12-203ENST00000389044 WIZO95785 1651 aa14.86□□□□□ -0.03
TRIP12-203ENST00000389044 ATAD2BQ9ULI0 1458 aa14.86□□□□□ -0.03
TRIP12-203ENST00000389044 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
TRIP12-203ENST00000389044 NEFMP07197 916 aa14.85□□□□□ -0.03
TRIP12-203ENST00000389044 SOGA1O94964 1423 aa14.84□□□□□ -0.03
TRIP12-203ENST00000389044 CFDP1Q9UEE9 299 aaPredicted RBP14.84□□□□□ -0.03
TRIP12-203ENST00000389044 RRP7BPQ9NSQ0 103 aa14.82□□□□□ -0.04
TRIP12-203ENST00000389044 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
TRIP12-203ENST00000389044 DAXXQ9UER7 740 aaPredicted RBP14.81□□□□□ -0.04
TRIP12-203ENST00000389044 TDRD9Q8NDG6 1382 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms