RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 AEBP2Q6ZN18 517 aaPredicted RBP14.72□□□□□ -0.05
MIR548A3-201ENST00000385297 CHIC1Q5VXU3 224 aa13.72□□□□□ -0.21
MIR548A3-201ENST00000385297 SENP3Q9H4L4 574 aaPredicted RBP12.61□□□□□ -0.39
MIR548A3-201ENST00000385297 PHF23Q9BUL5 403 aaPredicted RBP12.37□□□□□ -0.43
MIR548A3-201ENST00000385297 FOXD1Q16676 465 aa11.81□□□□□ -0.52
MIR548A3-201ENST00000385297 POTEDQ86YR6 584 aa11.73□□□□□ -0.53
MIR548A3-201ENST00000385297 MSH5O43196 834 aa11.23□□□□□ -0.61
MIR548A3-201ENST00000385297 PIAS4Q8N2W9 510 aaPredicted RBP10.89□□□□□ -0.67
MIR548A3-201ENST00000385297 PPP6R1Q9UPN7 881 aa10.69□□□□□ -0.7
MIR548A3-201ENST00000385297 ADRA2BP18089 450 aa10.6□□□□□ -0.71
MIR548A3-201ENST00000385297 PLPPR3Q6T4P5 718 aa10.59□□□□□ -0.71
MIR548A3-201ENST00000385297 DMRT2Q9Y5R5 561 aa9.95□□□□□ -0.82
MIR548A3-201ENST00000385297 CACNB1Q02641 598 aaPredicted RBP9.87□□□□□ -0.83
MIR548A3-201ENST00000385297 MAPK8IP2Q13387 824 aaPredicted RBP9.87□□□□□ -0.83
MIR548A3-201ENST00000385297 SCAF1Q9H7N4 1312 aaKnown RBP9.71□□□□□ -0.86
MIR548A3-201ENST00000385297 RNF39Q9H2S5 420 aa9.56□□□□□ -0.88
MIR548A3-201ENST00000385297 DCAF8L1A6NGE4 600 aa9.44□□□□□ -0.9
MIR548A3-201ENST00000385297 HOXD11P31277 338 aaPredicted RBP9.42□□□□□ -0.9
MIR548A3-201ENST00000385297 C1QBPQ07021 282 aaKnown RBP9.38□□□□□ -0.91
MIR548A3-201ENST00000385297 DNAJC5BQ9UF47 199 aa9.23□□□□□ -0.93
MIR548A3-201ENST00000385297 PPP4R3CPQ6ZMV5 832 aa9.21□□□□□ -0.94
MIR548A3-201ENST00000385297 RNF216Q9NWF9 866 aaPredicted RBP9.21□□□□□ -0.94
MIR548A3-201ENST00000385297 CNKSR2Q8WXI2 1034 aa9.16□□□□□ -0.94
MIR548A3-201ENST00000385297 POTEHQ6S545 545 aa9.09□□□□□ -0.95
MIR548A3-201ENST00000385297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.89□□□□□ -0.99
MIR548A3-201ENST00000385297 DSG3P32926 999 aa8.78□□□□□ -1
MIR548A3-201ENST00000385297 NCBP3Q53F19 620 aaKnown RBP8.71□□□□□ -1.02
MIR548A3-201ENST00000385297 U3KPZ7 1027 aaPredicted RBP8.71□□□□□ -1.02
MIR548A3-201ENST00000385297 SPINK5Q9NQ38 1064 aaPredicted RBP8.69□□□□□ -1.02
MIR548A3-201ENST00000385297 CAPN15O75808 1086 aa8.66□□□□□ -1.02
MIR548A3-201ENST00000385297 NPM3O75607 178 aaKnown RBP8.61□□□□□ -1.03
MIR548A3-201ENST00000385297 ABCB7O75027 752 aa8.42□□□□□ -1.06
MIR548A3-201ENST00000385297 ZNF219Q9P2Y4 722 aaPredicted RBP8.42□□□□□ -1.06
MIR548A3-201ENST00000385297 TRHP20396 242 aaPredicted RBP8.41□□□□□ -1.06
MIR548A3-201ENST00000385297 APLP2Q06481 763 aa8.4□□□□□ -1.06
MIR548A3-201ENST00000385297 RBM42Q9BTD8 480 aaKnown RBP8.38□□□□□ -1.07
MIR548A3-201ENST00000385297 CHRDL2Q6WN34 429 aa8.37□□□□□ -1.07
MIR548A3-201ENST00000385297 SLC4A2P04920 1241 aa8.35□□□□□ -1.07
MIR548A3-201ENST00000385297 SP7Q8TDD2 431 aaPredicted RBP8.31□□□□□ -1.08
MIR548A3-201ENST00000385297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.28□□□□□ -1.08
MIR548A3-201ENST00000385297 HNRNPUL2Q1KMD3 747 aaKnown RBP8.28□□□□□ -1.08
MIR548A3-201ENST00000385297 SAMD1Q6SPF0 538 aaPredicted RBP8.22□□□□□ -1.09
MIR548A3-201ENST00000385297 POLA2Q14181 598 aa8.11□□□□□ -1.11
MIR548A3-201ENST00000385297 AKT1S1Q96B36 256 aa8.1□□□□□ -1.11
MIR548A3-201ENST00000385297 PIP4P2Q8N4L2 257 aa8.08□□□□□ -1.12
MIR548A3-201ENST00000385297 KCNA4P22459 653 aa8.02□□□□□ -1.13
MIR548A3-201ENST00000385297 REM2Q8IYK8 340 aaPredicted RBP8.02□□□□□ -1.13
MIR548A3-201ENST00000385297 HAX1O00165 279 aa8.01□□□□□ -1.13
MIR548A3-201ENST00000385297 FXR2P51116 673 aaKnown RBP eCLIP7.98□□□□□ -1.13
MIR548A3-201ENST00000385297 MYCNP04198 464 aaPredicted RBP7.97□□□□□ -1.13
MIR548A3-201ENST00000385297 PITPNM1O00562 1244 aa7.93□□□□□ -1.14
MIR548A3-201ENST00000385297 ZBTB12Q9Y330 459 aaPredicted RBP7.93□□□□□ -1.14
MIR548A3-201ENST00000385297 EVX2Q03828 476 aa7.92□□□□□ -1.14
MIR548A3-201ENST00000385297 OSCARQ8IYS5 282 aa7.86□□□□□ -1.15
MIR548A3-201ENST00000385297 ATF5Q9Y2D1 282 aaPredicted RBP7.82□□□□□ -1.16
MIR548A3-201ENST00000385297 LHX8Q68G74 356 aa7.78□□□□□ -1.16
MIR548A3-201ENST00000385297 C19orf67A6NJJ6 358 aa7.74□□□□□ -1.17
MIR548A3-201ENST00000385297 GABBR2O75899 941 aa7.71□□□□□ -1.18
MIR548A3-201ENST00000385297 PRKAR2AP13861 404 aaKnown RBP7.7□□□□□ -1.18
MIR548A3-201ENST00000385297 SPDYE2BA6NHP3 402 aa7.65□□□□□ -1.18
MIR548A3-201ENST00000385297 SPDYE6P0CI01 402 aa7.65□□□□□ -1.18
MIR548A3-201ENST00000385297 SPDYE2Q495Y8 402 aa7.65□□□□□ -1.18
MIR548A3-201ENST00000385297 FOXD4L1Q9NU39 408 aa7.63□□□□□ -1.19
MIR548A3-201ENST00000385297 SPDYE1Q8NFV5 336 aaPredicted RBP7.62□□□□□ -1.19
MIR548A3-201ENST00000385297 PLSCR2Q9NRY7 297 aa7.6□□□□□ -1.19
MIR548A3-201ENST00000385297 POTEIP0CG38 1075 aa7.57□□□□□ -1.2
MIR548A3-201ENST00000385297 CLEC11AQ9Y240 323 aa7.57□□□□□ -1.2
MIR548A3-201ENST00000385297 SSUH2Q9Y2M2 353 aa7.53□□□□□ -1.2
MIR548A3-201ENST00000385297 FBLN2P98095 1184 aa7.51□□□□□ -1.21
MIR548A3-201ENST00000385297 CHADLQ6NUI6 762 aa7.5□□□□□ -1.21
MIR548A3-201ENST00000385297 ATXN8OSP0DMR3 200 aa7.48□□□□□ -1.21
MIR548A3-201ENST00000385297 CLCN6P51797 869 aa7.48□□□□□ -1.21
MIR548A3-201ENST00000385297 SLC4A1APQ9BWU0 796 aaKnown RBP7.46□□□□□ -1.22
MIR548A3-201ENST00000385297 MKRN4PQ13434 485 aaPredicted RBP7.45□□□□□ -1.22
MIR548A3-201ENST00000385297 ZNF692Q9BU19 519 aaPredicted RBP7.45□□□□□ -1.22
MIR548A3-201ENST00000385297 CD44P16070 742 aaKnown RBP7.43□□□□□ -1.22
MIR548A3-201ENST00000385297 PRR29P0C7W0 189 aa7.41□□□□□ -1.22
MIR548A3-201ENST00000385297 ZBTB22O15209 634 aa7.38□□□□□ -1.23
MIR548A3-201ENST00000385297 FARP1Q9Y4F1 1045 aaPredicted RBP7.38□□□□□ -1.23
MIR548A3-201ENST00000385297 OTUD5Q96G74 571 aa7.37□□□□□ -1.23
MIR548A3-201ENST00000385297 DCBLD2Q96PD2 775 aa7.37□□□□□ -1.23
MIR548A3-201ENST00000385297 POTEMA6NI47 508 aa7.34□□□□□ -1.23
MIR548A3-201ENST00000385297 ZNF579Q8NAF0 562 aaKnown RBP7.34□□□□□ -1.23
MIR548A3-201ENST00000385297 PABPN1Q86U42 306 aaKnown RBP eCLIP7.33□□□□□ -1.24
MIR548A3-201ENST00000385297 POTEB2H3BUK9 544 aa7.3□□□□□ -1.24
MIR548A3-201ENST00000385297 POTEGQ6S5H5 508 aa7.3□□□□□ -1.24
MIR548A3-201ENST00000385297 PCDH10Q9P2E7 1040 aa7.29□□□□□ -1.24
MIR548A3-201ENST00000385297 GALR2O43603 387 aaPredicted RBP7.25□□□□□ -1.25
MIR548A3-201ENST00000385297 ZRANB1Q9UGI0 708 aa7.24□□□□□ -1.25
MIR548A3-201ENST00000385297 PELP1Q8IZL8 1130 aaKnown RBP7.17□□□□□ -1.26
MIR548A3-201ENST00000385297 LCE2DQ5TA82 110 aaPredicted RBP7.16□□□□□ -1.26
MIR548A3-201ENST00000385297 CREBZFQ9NS37 354 aa7.16□□□□□ -1.26
MIR548A3-201ENST00000385297 POTEJP0CG39 1038 aa7.13□□□□□ -1.27
MIR548A3-201ENST00000385297 PHF12Q96QT6 1004 aa7.11□□□□□ -1.27
MIR548A3-201ENST00000385297 ASTLQ6HA08 431 aaPredicted RBP7.1□□□□□ -1.27
MIR548A3-201ENST00000385297 MAMSTRQ6ZN01 415 aa7.09□□□□□ -1.27
MIR548A3-201ENST00000385297 METRNQ9UJH8 293 aa7.09□□□□□ -1.27
MIR548A3-201ENST00000385297 C7P10643 843 aa7.08□□□□□ -1.28
MIR548A3-201ENST00000385297 SLC39A7Q92504 469 aa7.08□□□□□ -1.28
MIR548A3-201ENST00000385297 PAK3O75914 559 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms