RNA–Protein interactions for RNA: ENST00000384671.1

RNU6-959P-201, Transcript of RNA, U6 small nuclear 959, pseudogene, humanhuman

BASIC

Gene RNU6-959P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-959P-201ENST00000384671 AEBP2Q6ZN18 517 aaPredicted RBP18.29■□□□□ 0.52
RNU6-959P-201ENST00000384671 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
RNU6-959P-201ENST00000384671 SENP3Q9H4L4 574 aaPredicted RBP15.65■□□□□ 0.1
RNU6-959P-201ENST00000384671 PHF23Q9BUL5 403 aaPredicted RBP15.4■□□□□ 0.06
RNU6-959P-201ENST00000384671 POTEDQ86YR6 584 aa14.72□□□□□ -0.05
RNU6-959P-201ENST00000384671 FOXD1Q16676 465 aa14.7□□□□□ -0.06
RNU6-959P-201ENST00000384671 MSH5O43196 834 aa13.95□□□□□ -0.18
RNU6-959P-201ENST00000384671 PIAS4Q8N2W9 510 aaPredicted RBP13.57□□□□□ -0.24
RNU6-959P-201ENST00000384671 PPP6R1Q9UPN7 881 aa13.29□□□□□ -0.28
RNU6-959P-201ENST00000384671 ADRA2BP18089 450 aa13.21□□□□□ -0.29
RNU6-959P-201ENST00000384671 PLPPR3Q6T4P5 718 aa13.07□□□□□ -0.32
RNU6-959P-201ENST00000384671 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
RNU6-959P-201ENST00000384671 MAPK8IP2Q13387 824 aaPredicted RBP12.34□□□□□ -0.43
RNU6-959P-201ENST00000384671 DMRT2Q9Y5R5 561 aa12.31□□□□□ -0.44
RNU6-959P-201ENST00000384671 SCAF1Q9H7N4 1312 aaKnown RBP12.04□□□□□ -0.48
RNU6-959P-201ENST00000384671 DCAF8L1A6NGE4 600 aa11.89□□□□□ -0.51
RNU6-959P-201ENST00000384671 RNF39Q9H2S5 420 aa11.86□□□□□ -0.51
RNU6-959P-201ENST00000384671 C1QBPQ07021 282 aaKnown RBP11.64□□□□□ -0.55
RNU6-959P-201ENST00000384671 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
RNU6-959P-201ENST00000384671 POTEHQ6S545 545 aa11.4□□□□□ -0.58
RNU6-959P-201ENST00000384671 PPP4R3CPQ6ZMV5 832 aa11.4□□□□□ -0.58
RNU6-959P-201ENST00000384671 RNF216Q9NWF9 866 aaPredicted RBP11.37□□□□□ -0.59
RNU6-959P-201ENST00000384671 CNKSR2Q8WXI2 1034 aa11.31□□□□□ -0.6
RNU6-959P-201ENST00000384671 DNAJC5BQ9UF47 199 aa11.29□□□□□ -0.6
RNU6-959P-201ENST00000384671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.09□□□□□ -0.63
RNU6-959P-201ENST00000384671 DSG3P32926 999 aa10.91□□□□□ -0.66
RNU6-959P-201ENST00000384671 CAPN15O75808 1086 aa10.84□□□□□ -0.67
RNU6-959P-201ENST00000384671 SPINK5Q9NQ38 1064 aaPredicted RBP10.84□□□□□ -0.67
RNU6-959P-201ENST00000384671 U3KPZ7 1027 aaPredicted RBP10.79□□□□□ -0.68
RNU6-959P-201ENST00000384671 NCBP3Q53F19 620 aaKnown RBP10.74□□□□□ -0.69
RNU6-959P-201ENST00000384671 NPM3O75607 178 aaKnown RBP10.61□□□□□ -0.71
RNU6-959P-201ENST00000384671 ABCB7O75027 752 aa10.55□□□□□ -0.72
RNU6-959P-201ENST00000384671 TRHP20396 242 aaPredicted RBP10.53□□□□□ -0.72
RNU6-959P-201ENST00000384671 CHRDL2Q6WN34 429 aa10.44□□□□□ -0.74
RNU6-959P-201ENST00000384671 ZNF219Q9P2Y4 722 aaPredicted RBP10.44□□□□□ -0.74
RNU6-959P-201ENST00000384671 RBM42Q9BTD8 480 aaKnown RBP10.4□□□□□ -0.74
RNU6-959P-201ENST00000384671 SP7Q8TDD2 431 aaPredicted RBP10.39□□□□□ -0.75
RNU6-959P-201ENST00000384671 APLP2Q06481 763 aa10.37□□□□□ -0.75
RNU6-959P-201ENST00000384671 SLC4A2P04920 1241 aa10.31□□□□□ -0.76
RNU6-959P-201ENST00000384671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.22□□□□□ -0.77
RNU6-959P-201ENST00000384671 HNRNPUL2Q1KMD3 747 aaKnown RBP10.22□□□□□ -0.77
RNU6-959P-201ENST00000384671 SAMD1Q6SPF0 538 aaPredicted RBP10.14□□□□□ -0.79
RNU6-959P-201ENST00000384671 POLA2Q14181 598 aa10.09□□□□□ -0.79
RNU6-959P-201ENST00000384671 HAX1O00165 279 aa10.08□□□□□ -0.8
RNU6-959P-201ENST00000384671 PIP4P2Q8N4L2 257 aa10.07□□□□□ -0.8
RNU6-959P-201ENST00000384671 AKT1S1Q96B36 256 aa10.04□□□□□ -0.8
RNU6-959P-201ENST00000384671 REM2Q8IYK8 340 aaPredicted RBP9.97□□□□□ -0.81
RNU6-959P-201ENST00000384671 EVX2Q03828 476 aa9.92□□□□□ -0.82
RNU6-959P-201ENST00000384671 FXR2P51116 673 aaKnown RBP eCLIP9.91□□□□□ -0.82
RNU6-959P-201ENST00000384671 KCNA4P22459 653 aa9.87□□□□□ -0.83
RNU6-959P-201ENST00000384671 PITPNM1O00562 1244 aa9.86□□□□□ -0.83
RNU6-959P-201ENST00000384671 MYCNP04198 464 aaPredicted RBP9.8□□□□□ -0.84
RNU6-959P-201ENST00000384671 OSCARQ8IYS5 282 aa9.79□□□□□ -0.84
RNU6-959P-201ENST00000384671 ZBTB12Q9Y330 459 aaPredicted RBP9.77□□□□□ -0.85
RNU6-959P-201ENST00000384671 LHX8Q68G74 356 aa9.76□□□□□ -0.85
RNU6-959P-201ENST00000384671 ATF5Q9Y2D1 282 aaPredicted RBP9.69□□□□□ -0.86
RNU6-959P-201ENST00000384671 PLSCR2Q9NRY7 297 aa9.68□□□□□ -0.86
RNU6-959P-201ENST00000384671 GABBR2O75899 941 aa9.64□□□□□ -0.87
RNU6-959P-201ENST00000384671 PRKAR2AP13861 404 aaKnown RBP9.61□□□□□ -0.87
RNU6-959P-201ENST00000384671 C19orf67A6NJJ6 358 aa9.6□□□□□ -0.87
RNU6-959P-201ENST00000384671 CLEC11AQ9Y240 323 aa9.5□□□□□ -0.89
RNU6-959P-201ENST00000384671 SPDYE2BA6NHP3 402 aa9.45□□□□□ -0.9
RNU6-959P-201ENST00000384671 SPDYE6P0CI01 402 aa9.45□□□□□ -0.9
RNU6-959P-201ENST00000384671 SPDYE2Q495Y8 402 aa9.45□□□□□ -0.9
RNU6-959P-201ENST00000384671 POTEIP0CG38 1075 aa9.44□□□□□ -0.9
RNU6-959P-201ENST00000384671 SPDYE1Q8NFV5 336 aaPredicted RBP9.44□□□□□ -0.9
RNU6-959P-201ENST00000384671 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
RNU6-959P-201ENST00000384671 FOXD4L1Q9NU39 408 aa9.37□□□□□ -0.91
RNU6-959P-201ENST00000384671 FBLN2P98095 1184 aa9.31□□□□□ -0.92
RNU6-959P-201ENST00000384671 ZNF692Q9BU19 519 aaPredicted RBP9.27□□□□□ -0.93
RNU6-959P-201ENST00000384671 CD44P16070 742 aaKnown RBP9.26□□□□□ -0.93
RNU6-959P-201ENST00000384671 SSUH2Q9Y2M2 353 aa9.25□□□□□ -0.93
RNU6-959P-201ENST00000384671 PRR29P0C7W0 189 aa9.24□□□□□ -0.93
RNU6-959P-201ENST00000384671 DCBLD2Q96PD2 775 aa9.24□□□□□ -0.93
RNU6-959P-201ENST00000384671 POTEMA6NI47 508 aa9.22□□□□□ -0.93
RNU6-959P-201ENST00000384671 CLCN6P51797 869 aa9.21□□□□□ -0.94
RNU6-959P-201ENST00000384671 OTUD5Q96G74 571 aa9.2□□□□□ -0.94
RNU6-959P-201ENST00000384671 MKRN4PQ13434 485 aaPredicted RBP9.18□□□□□ -0.94
RNU6-959P-201ENST00000384671 POTEGQ6S5H5 508 aa9.17□□□□□ -0.94
RNU6-959P-201ENST00000384671 SLC4A1APQ9BWU0 796 aaKnown RBP9.17□□□□□ -0.94
RNU6-959P-201ENST00000384671 FARP1Q9Y4F1 1045 aaPredicted RBP9.16□□□□□ -0.94
RNU6-959P-201ENST00000384671 POTEB2H3BUK9 544 aa9.13□□□□□ -0.95
RNU6-959P-201ENST00000384671 ATXN8OSP0DMR3 200 aa9.12□□□□□ -0.95
RNU6-959P-201ENST00000384671 PABPN1Q86U42 306 aaKnown RBP eCLIP9.11□□□□□ -0.95
RNU6-959P-201ENST00000384671 ZNF579Q8NAF0 562 aaKnown RBP9.07□□□□□ -0.96
RNU6-959P-201ENST00000384671 ZBTB22O15209 634 aa9.06□□□□□ -0.96
RNU6-959P-201ENST00000384671 PCDH10Q9P2E7 1040 aa9.06□□□□□ -0.96
RNU6-959P-201ENST00000384671 ZRANB1Q9UGI0 708 aa9.05□□□□□ -0.96
RNU6-959P-201ENST00000384671 GALR2O43603 387 aaPredicted RBP9.04□□□□□ -0.96
RNU6-959P-201ENST00000384671 PELP1Q8IZL8 1130 aaKnown RBP8.94□□□□□ -0.98
RNU6-959P-201ENST00000384671 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.98
RNU6-959P-201ENST00000384671 POTEJP0CG39 1038 aa8.89□□□□□ -0.99
RNU6-959P-201ENST00000384671 FAM163AQ96GL9 167 aaPredicted RBP8.88□□□□□ -0.99
RNU6-959P-201ENST00000384671 PHF12Q96QT6 1004 aa8.88□□□□□ -0.99
RNU6-959P-201ENST00000384671 CREBZFQ9NS37 354 aa8.86□□□□□ -0.99
RNU6-959P-201ENST00000384671 METRNQ9UJH8 293 aa8.84□□□□□ -0.99
RNU6-959P-201ENST00000384671 MAMSTRQ6ZN01 415 aa8.82□□□□□ -1
RNU6-959P-201ENST00000384671 PAK3O75914 559 aaPredicted RBP8.81□□□□□ -1
RNU6-959P-201ENST00000384671 C7P10643 843 aa8.78□□□□□ -1
RNU6-959P-201ENST00000384671 ASTLQ6HA08 431 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms