RNA–Protein interactions for RNA: ENST00000384143.1

RNU6-398P-201, Transcript of RNA, U6 small nuclear 398, pseudogene, humanhuman

BASIC

Gene RNU6-398P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-398P-201ENST00000384143 AEBP2Q6ZN18 517 aaPredicted RBP17.96■□□□□ 0.47
RNU6-398P-201ENST00000384143 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
RNU6-398P-201ENST00000384143 SENP3Q9H4L4 574 aaPredicted RBP15.25■□□□□ 0.03
RNU6-398P-201ENST00000384143 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
RNU6-398P-201ENST00000384143 FOXD1Q16676 465 aa14.26□□□□□ -0.13
RNU6-398P-201ENST00000384143 PLPPR3Q6T4P5 718 aa13.55□□□□□ -0.24
RNU6-398P-201ENST00000384143 PPP6R1Q9UPN7 881 aa13.35□□□□□ -0.27
RNU6-398P-201ENST00000384143 MSH5O43196 834 aa13.28□□□□□ -0.28
RNU6-398P-201ENST00000384143 ADRA2BP18089 450 aa13.27□□□□□ -0.29
RNU6-398P-201ENST00000384143 PIAS4Q8N2W9 510 aaPredicted RBP13.26□□□□□ -0.29
RNU6-398P-201ENST00000384143 POTEDQ86YR6 584 aa13.02□□□□□ -0.33
RNU6-398P-201ENST00000384143 NISCHQ9Y2I1 1504 aa12.32□□□□□ -0.44
RNU6-398P-201ENST00000384143 MAPK8IP2Q13387 824 aaPredicted RBP12.2□□□□□ -0.46
RNU6-398P-201ENST00000384143 DMRT2Q9Y5R5 561 aa12.12□□□□□ -0.47
RNU6-398P-201ENST00000384143 SCAF1Q9H7N4 1312 aaKnown RBP12.08□□□□□ -0.48
RNU6-398P-201ENST00000384143 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
RNU6-398P-201ENST00000384143 HOXD11P31277 338 aaPredicted RBP11.68□□□□□ -0.54
RNU6-398P-201ENST00000384143 CNKSR2Q8WXI2 1034 aa11.66□□□□□ -0.54
RNU6-398P-201ENST00000384143 RNF216Q9NWF9 866 aaPredicted RBP11.57□□□□□ -0.56
RNU6-398P-201ENST00000384143 DCAF8L1A6NGE4 600 aa11.51□□□□□ -0.57
RNU6-398P-201ENST00000384143 ABCC9O60706 1549 aa11.5□□□□□ -0.57
RNU6-398P-201ENST00000384143 RNF39Q9H2S5 420 aa11.39□□□□□ -0.59
RNU6-398P-201ENST00000384143 CACNB1Q02641 598 aaPredicted RBP11.38□□□□□ -0.59
RNU6-398P-201ENST00000384143 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
RNU6-398P-201ENST00000384143 DNAJC5BQ9UF47 199 aa11.3□□□□□ -0.6
RNU6-398P-201ENST00000384143 NPM3O75607 178 aaKnown RBP11.28□□□□□ -0.6
RNU6-398P-201ENST00000384143 C1QBPQ07021 282 aaKnown RBP11.19□□□□□ -0.62
RNU6-398P-201ENST00000384143 CCDC180Q9P1Z9 1646 aa11.12□□□□□ -0.63
RNU6-398P-201ENST00000384143 KCNA4P22459 653 aa11.07□□□□□ -0.64
RNU6-398P-201ENST00000384143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.04□□□□□ -0.64
RNU6-398P-201ENST00000384143 U3KPZ7 1027 aaPredicted RBP10.88□□□□□ -0.67
RNU6-398P-201ENST00000384143 SLC4A2P04920 1241 aa10.81□□□□□ -0.68
RNU6-398P-201ENST00000384143 RB1CC1Q8TDY2 1594 aa10.75□□□□□ -0.69
RNU6-398P-201ENST00000384143 SPINK5Q9NQ38 1064 aaPredicted RBP10.72□□□□□ -0.69
RNU6-398P-201ENST00000384143 PABPN1Q86U42 306 aaKnown RBP eCLIP10.67□□□□□ -0.7
RNU6-398P-201ENST00000384143 DSG3P32926 999 aa10.65□□□□□ -0.7
RNU6-398P-201ENST00000384143 CAPN15O75808 1086 aa10.63□□□□□ -0.71
RNU6-398P-201ENST00000384143 NACADO15069 1562 aa10.61□□□□□ -0.71
RNU6-398P-201ENST00000384143 DCAF8L2P0C7V8 631 aa10.53□□□□□ -0.72
RNU6-398P-201ENST00000384143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.5□□□□□ -0.73
RNU6-398P-201ENST00000384143 HNRNPUL2Q1KMD3 747 aaKnown RBP10.5□□□□□ -0.73
RNU6-398P-201ENST00000384143 BICRAQ9NZM4 1560 aa10.49□□□□□ -0.73
RNU6-398P-201ENST00000384143 TRHP20396 242 aaPredicted RBP10.47□□□□□ -0.73
RNU6-398P-201ENST00000384143 APLP2Q06481 763 aa10.47□□□□□ -0.73
RNU6-398P-201ENST00000384143 SAMD1Q6SPF0 538 aaPredicted RBP10.46□□□□□ -0.73
RNU6-398P-201ENST00000384143 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.73
RNU6-398P-201ENST00000384143 UNC13AQ9UPW8 1703 aa10.45□□□□□ -0.74
RNU6-398P-201ENST00000384143 ABCB7O75027 752 aa10.41□□□□□ -0.74
RNU6-398P-201ENST00000384143 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.74
RNU6-398P-201ENST00000384143 SLC4A1APQ9BWU0 796 aaKnown RBP10.39□□□□□ -0.75
RNU6-398P-201ENST00000384143 MYO15BQ96JP2 1530 aa10.38□□□□□ -0.75
RNU6-398P-201ENST00000384143 CECR2Q9BXF3 1484 aa10.37□□□□□ -0.75
RNU6-398P-201ENST00000384143 DNAJC5Q9H3Z4 198 aa10.34□□□□□ -0.75
RNU6-398P-201ENST00000384143 CC2D2AQ9P2K1 1620 aa10.33□□□□□ -0.76
RNU6-398P-201ENST00000384143 SHROOM4Q9ULL8 1493 aa10.29□□□□□ -0.76
RNU6-398P-201ENST00000384143 FOXD4L1Q9NU39 408 aa10.28□□□□□ -0.76
RNU6-398P-201ENST00000384143 EIF4G1Q04637 1599 aaKnown RBP10.25□□□□□ -0.77
RNU6-398P-201ENST00000384143 POLA2Q14181 598 aa10.23□□□□□ -0.77
RNU6-398P-201ENST00000384143 ZBTB22O15209 634 aa10.22□□□□□ -0.77
RNU6-398P-201ENST00000384143 ATF5Q9Y2D1 282 aaPredicted RBP10.22□□□□□ -0.77
RNU6-398P-201ENST00000384143 POTEHQ6S545 545 aa10.18□□□□□ -0.78
RNU6-398P-201ENST00000384143 SCRIBQ14160 1630 aa10.18□□□□□ -0.78
RNU6-398P-201ENST00000384143 ZCCHC6Q5VYS8 1495 aaKnown RBP10.17□□□□□ -0.78
RNU6-398P-201ENST00000384143 DCAF1Q9Y4B6 1507 aa10.14□□□□□ -0.79
RNU6-398P-201ENST00000384143 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
RNU6-398P-201ENST00000384143 ATXN8OSP0DMR3 200 aa10□□□□□ -0.81
RNU6-398P-201ENST00000384143 CUX2O14529 1486 aa9.99□□□□□ -0.81
RNU6-398P-201ENST00000384143 ZBTB12Q9Y330 459 aaPredicted RBP9.98□□□□□ -0.81
RNU6-398P-201ENST00000384143 CHRDL2Q6WN34 429 aa9.92□□□□□ -0.82
RNU6-398P-201ENST00000384143 ERCC6Q03468 1493 aa9.91□□□□□ -0.82
RNU6-398P-201ENST00000384143 OSCARQ8IYS5 282 aa9.9□□□□□ -0.82
RNU6-398P-201ENST00000384143 AKT1S1Q96B36 256 aa9.9□□□□□ -0.82
RNU6-398P-201ENST00000384143 NCAPD3P42695 1498 aa9.84□□□□□ -0.83
RNU6-398P-201ENST00000384143 REM2Q8IYK8 340 aaPredicted RBP9.82□□□□□ -0.84
RNU6-398P-201ENST00000384143 NESP48681 1621 aa9.8□□□□□ -0.84
RNU6-398P-201ENST00000384143 ATAD2BQ9ULI0 1458 aa9.78□□□□□ -0.84
RNU6-398P-201ENST00000384143 TRIM41Q8WV44 630 aa9.77□□□□□ -0.85
RNU6-398P-201ENST00000384143 MKRN4PQ13434 485 aaPredicted RBP9.76□□□□□ -0.85
RNU6-398P-201ENST00000384143 THOC2Q8NI27 1593 aaKnown RBP9.73□□□□□ -0.85
RNU6-398P-201ENST00000384143 FBLN2P98095 1184 aa9.72□□□□□ -0.85
RNU6-398P-201ENST00000384143 HMGXB3Q12766 1538 aa9.72□□□□□ -0.85
RNU6-398P-201ENST00000384143 SPDYE2BA6NHP3 402 aa9.71□□□□□ -0.86
RNU6-398P-201ENST00000384143 PITPNM1O00562 1244 aa9.71□□□□□ -0.86
RNU6-398P-201ENST00000384143 SPDYE6P0CI01 402 aa9.71□□□□□ -0.86
RNU6-398P-201ENST00000384143 SPDYE2Q495Y8 402 aa9.71□□□□□ -0.86
RNU6-398P-201ENST00000384143 CSRNP3Q8WYN3 585 aa9.71□□□□□ -0.86
RNU6-398P-201ENST00000384143 PIP4P2Q8N4L2 257 aa9.7□□□□□ -0.86
RNU6-398P-201ENST00000384143 SMARCA2P51531 1590 aa9.68□□□□□ -0.86
RNU6-398P-201ENST00000384143 SMARCA4P51532 1647 aa9.66□□□□□ -0.86
RNU6-398P-201ENST00000384143 FXR2P51116 673 aaKnown RBP eCLIP9.65□□□□□ -0.86
RNU6-398P-201ENST00000384143 BAZ1BQ9UIG0 1483 aaKnown RBP9.65□□□□□ -0.87
RNU6-398P-201ENST00000384143 SSUH2Q9Y2M2 353 aa9.62□□□□□ -0.87
RNU6-398P-201ENST00000384143 LAMC3Q9Y6N6 1575 aa9.62□□□□□ -0.87
RNU6-398P-201ENST00000384143 PDS5BQ9NTI5 1447 aa9.59□□□□□ -0.87
RNU6-398P-201ENST00000384143 KIF21AQ7Z4S6 1674 aa9.58□□□□□ -0.88
RNU6-398P-201ENST00000384143 ZNF692Q9BU19 519 aaPredicted RBP9.57□□□□□ -0.88
RNU6-398P-201ENST00000384143 PEG3Q9GZU2 1588 aa9.57□□□□□ -0.88
RNU6-398P-201ENST00000384143 BAZ1AQ9NRL2 1556 aaPredicted RBP9.57□□□□□ -0.88
RNU6-398P-201ENST00000384143 MRC2Q9UBG0 1479 aa9.54□□□□□ -0.88
RNU6-398P-201ENST00000384143 SP7Q8TDD2 431 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms