RNA–Protein interactions for RNA: ENST00000381795.10

RBM47-203, Transcript of RNA binding motif protein 47, humanhuman

APPRIS P3 TSL 2 BASIC

Gene RBM47, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-203ENST00000381795 NISCHQ9Y2I1 1504 aa24.49■■□□□ 1.51
RBM47-203ENST00000381795 DCAF8L2P0C7V8 631 aa24.25■■□□□ 1.47
RBM47-203ENST00000381795 SUPT5HO00267 1087 aaKnown RBP23.74■■□□□ 1.39
RBM47-203ENST00000381795 PELP1Q8IZL8 1130 aaKnown RBP23.53■■□□□ 1.36
RBM47-203ENST00000381795 SHROOM4Q9ULL8 1493 aa23.21■■□□□ 1.31
RBM47-203ENST00000381795 PCGF6Q9BYE7 350 aa23.2■■□□□ 1.3
RBM47-203ENST00000381795 MYT1Q01538 1121 aa23.16■■□□□ 1.3
RBM47-203ENST00000381795 ZEB1P37275 1124 aaPredicted RBP22.91■■□□□ 1.26
RBM47-203ENST00000381795 HRCP23327 699 aa22.82■■□□□ 1.24
RBM47-203ENST00000381795 CENPBP07199 599 aaPredicted RBP22.8■■□□□ 1.24
RBM47-203ENST00000381795 EHMT2Q96KQ7 1210 aa22.49■■□□□ 1.19
RBM47-203ENST00000381795 CCER1Q8TC90 406 aaPredicted RBP22.28■■□□□ 1.16
RBM47-203ENST00000381795 TRIM26Q12899 539 aaPredicted RBP22.28■■□□□ 1.16
RBM47-203ENST00000381795 FAM9AQ8IZU1 332 aaPredicted RBP22.23■■□□□ 1.15
RBM47-203ENST00000381795 PPARGC1BQ86YN6 1023 aaKnown RBP22.14■■□□□ 1.13
RBM47-203ENST00000381795 APLP2Q06481 763 aa22.11■■□□□ 1.13
RBM47-203ENST00000381795 ERICH6Q7L0X2 663 aa22.05■■□□□ 1.12
RBM47-203ENST00000381795 TRIM41Q8WV44 630 aa22■■□□□ 1.11
RBM47-203ENST00000381795 YTHDC1Q96MU7 727 aaKnown RBP21.96■■□□□ 1.11
RBM47-203ENST00000381795 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
RBM47-203ENST00000381795 TTBK1Q5TCY1 1321 aaPredicted RBP21.93■■□□□ 1.1
RBM47-203ENST00000381795 NEFLP07196 543 aa21.76■■□□□ 1.07
RBM47-203ENST00000381795 LOC105371045A0A1W2PR82 267 aa21.73■■□□□ 1.07
RBM47-203ENST00000381795 DIEXFQ68CQ4 756 aaKnown RBP21.59■■□□□ 1.05
RBM47-203ENST00000381795 GTF3C3Q9Y5Q9 886 aa21.55■■□□□ 1.04
RBM47-203ENST00000381795 UBTFP17480 764 aaKnown RBP21.44■■□□□ 1.02
RBM47-203ENST00000381795 ACIN1Q9UKV3 1341 aaKnown RBP21.44■■□□□ 1.02
RBM47-203ENST00000381795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
RBM47-203ENST00000381795 RANGAP1P46060 587 aaPredicted RBP21.33■■□□□ 1
RBM47-203ENST00000381795 SCAF1Q9H7N4 1312 aaKnown RBP21.14■□□□□ 0.97
RBM47-203ENST00000381795 HNRNPUL2Q1KMD3 747 aaKnown RBP21.08■□□□□ 0.96
RBM47-203ENST00000381795 DCAF1Q9Y4B6 1507 aa21.07■□□□□ 0.96
RBM47-203ENST00000381795 ZNF316A6NFI3 1004 aaPredicted RBP21.05■□□□□ 0.96
RBM47-203ENST00000381795 NEUROD1Q13562 356 aa20.96■□□□□ 0.95
RBM47-203ENST00000381795 ATP1B4Q9UN42 357 aaPredicted RBP20.94■□□□□ 0.94
RBM47-203ENST00000381795 CLSPNQ9HAW4 1339 aa20.92■□□□□ 0.94
RBM47-203ENST00000381795 RTL5Q5HYW3 569 aaPredicted RBP20.92■□□□□ 0.94
RBM47-203ENST00000381795 DAXXQ9UER7 740 aaPredicted RBP20.83■□□□□ 0.93
RBM47-203ENST00000381795 BCANQ96GW7 911 aa20.81■□□□□ 0.92
RBM47-203ENST00000381795 ITGAEP38570 1179 aa20.74■□□□□ 0.91
RBM47-203ENST00000381795 CDK11AQ9UQ88 783 aaPredicted RBP20.72■□□□□ 0.91
RBM47-203ENST00000381795 ABCC9O60706 1549 aa20.62■□□□□ 0.89
RBM47-203ENST00000381795 MYT1LQ9UL68 1186 aa20.55■□□□□ 0.88
RBM47-203ENST00000381795 ANP32CO43423 234 aa20.54■□□□□ 0.88
RBM47-203ENST00000381795 MYO15BQ96JP2 1530 aa20.52■□□□□ 0.88
RBM47-203ENST00000381795 PABPN1Q86U42 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
RBM47-203ENST00000381795 FKBP8Q14318 412 aa20.45■□□□□ 0.86
RBM47-203ENST00000381795 CCDC180Q9P1Z9 1646 aa20.44■□□□□ 0.86
RBM47-203ENST00000381795 ANP32EQ9BTT0 268 aa20.43■□□□□ 0.86
RBM47-203ENST00000381795 POLR3GLQ9BT43 218 aa20.39■□□□□ 0.86
RBM47-203ENST00000381795 MIER1Q8N108 512 aa20.39■□□□□ 0.85
RBM47-203ENST00000381795 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
RBM47-203ENST00000381795 ANP32AP39687 249 aaKnown RBP20.33■□□□□ 0.84
RBM47-203ENST00000381795 CNGB1Q14028 1251 aaPredicted RBP20.27■□□□□ 0.84
RBM47-203ENST00000381795 FAM50AQ14320 339 aaKnown RBP20.23■□□□□ 0.83
RBM47-203ENST00000381795 CSRNP3Q8WYN3 585 aa20.22■□□□□ 0.83
RBM47-203ENST00000381795 BCL11AQ9H165 835 aa20.14■□□□□ 0.82
RBM47-203ENST00000381795 EIF5BO60841 1220 aaKnown RBP20.14■□□□□ 0.81
RBM47-203ENST00000381795 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.8
RBM47-203ENST00000381795 HNRNPUQ00839 825 aaKnown RBP eCLIP20.05■□□□□ 0.8
RBM47-203ENST00000381795 SUPT16HQ9Y5B9 1047 aaKnown RBP20.02■□□□□ 0.8
RBM47-203ENST00000381795 NBR1Q14596 966 aa20.02■□□□□ 0.8
RBM47-203ENST00000381795 ZBTB47Q9UFB7 747 aaPredicted RBP20.01■□□□□ 0.79
RBM47-203ENST00000381795 SCRIBQ14160 1630 aa20.01■□□□□ 0.79
RBM47-203ENST00000381795 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
RBM47-203ENST00000381795 GLIPR1L2Q4G1C9 344 aa19.99■□□□□ 0.79
RBM47-203ENST00000381795 NPM2Q86SE8 214 aaKnown RBP19.98■□□□□ 0.79
RBM47-203ENST00000381795 CCDC136Q96JN2 1154 aa19.86■□□□□ 0.77
RBM47-203ENST00000381795 TONSLQ96HA7 1378 aa19.85■□□□□ 0.77
RBM47-203ENST00000381795 FAM9BQ8IZU0 186 aa19.79■□□□□ 0.76
RBM47-203ENST00000381795 IRX6P78412 446 aaPredicted RBP19.77■□□□□ 0.76
RBM47-203ENST00000381795 P3H3Q8IVL6 736 aa19.75■□□□□ 0.75
RBM47-203ENST00000381795 RBM19Q9Y4C8 960 aaKnown RBP19.74■□□□□ 0.75
RBM47-203ENST00000381795 TSHZ2Q9NRE2 1034 aa19.73■□□□□ 0.75
RBM47-203ENST00000381795 ZNF326Q5BKZ1 582 aaKnown RBP19.73■□□□□ 0.75
RBM47-203ENST00000381795 CEP162Q5TB80 1403 aa19.73■□□□□ 0.75
RBM47-203ENST00000381795 RSF1Q96T23 1441 aaPredicted RBP19.71■□□□□ 0.75
RBM47-203ENST00000381795 MRS2Q9HD23 443 aa19.67■□□□□ 0.74
RBM47-203ENST00000381795 CLIP1P30622 1438 aa19.64■□□□□ 0.74
RBM47-203ENST00000381795 PPP4R2Q9NY27 417 aa19.64■□□□□ 0.73
RBM47-203ENST00000381795 NOP58Q9Y2X3 529 aaKnown RBP19.64■□□□□ 0.73
RBM47-203ENST00000381795 EEA1Q15075 1411 aa19.63■□□□□ 0.73
RBM47-203ENST00000381795 DEKP35659 375 aaKnown RBP19.63■□□□□ 0.73
RBM47-203ENST00000381795 CANXP27824 592 aaKnown RBP19.61■□□□□ 0.73
RBM47-203ENST00000381795 TNIKQ9UKE5 1360 aa19.61■□□□□ 0.73
RBM47-203ENST00000381795 ANP32BQ92688 251 aaKnown RBP19.6■□□□□ 0.73
RBM47-203ENST00000381795 PPM1GO15355 546 aaPredicted RBP19.59■□□□□ 0.73
RBM47-203ENST00000381795 DDRGK1Q96HY6 314 aa19.59■□□□□ 0.73
RBM47-203ENST00000381795 HIRIP3Q9BW71 556 aaPredicted RBP19.57■□□□□ 0.72
RBM47-203ENST00000381795 UPF2Q9HAU5 1272 aaKnown RBP19.57■□□□□ 0.72
RBM47-203ENST00000381795 TMC1Q8TDI8 760 aa19.55■□□□□ 0.72
RBM47-203ENST00000381795 SLC4A1APQ9BWU0 796 aaKnown RBP19.54■□□□□ 0.72
RBM47-203ENST00000381795 ARID3CA6NKF2 412 aa19.54■□□□□ 0.72
RBM47-203ENST00000381795 NEFMP07197 916 aa19.54■□□□□ 0.72
RBM47-203ENST00000381795 GOLGA3Q08378 1498 aa19.54■□□□□ 0.72
RBM47-203ENST00000381795 FBLN2P98095 1184 aa19.53■□□□□ 0.72
RBM47-203ENST00000381795 ERICH6BQ5W0A0 696 aa19.51■□□□□ 0.71
RBM47-203ENST00000381795 RTN4Q9NQC3 1192 aaKnown RBP19.49■□□□□ 0.71
RBM47-203ENST00000381795 CCER2I3L3R5 266 aa19.48■□□□□ 0.71
RBM47-203ENST00000381795 EIF4G2P78344 907 aaKnown RBP eCLIP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms