RNA–Protein interactions for RNA: ENST00000381588.8

RNF6-203, Transcript of ring finger protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF6, Length 3,706 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-203ENST00000381588 NISCHQ9Y2I1 1504 aa22.07■■□□□ 1.12
RNF6-203ENST00000381588 DCAF8L2P0C7V8 631 aa21.05■□□□□ 0.96
RNF6-203ENST00000381588 SHROOM4Q9ULL8 1493 aa20.28■□□□□ 0.84
RNF6-203ENST00000381588 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
RNF6-203ENST00000381588 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
RNF6-203ENST00000381588 ABCC9O60706 1549 aa18.93■□□□□ 0.62
RNF6-203ENST00000381588 PPARGC1BQ86YN6 1023 aaKnown RBP18.87■□□□□ 0.61
RNF6-203ENST00000381588 FAM9AQ8IZU1 332 aaPredicted RBP18.76■□□□□ 0.59
RNF6-203ENST00000381588 PELP1Q8IZL8 1130 aaKnown RBP18.73■□□□□ 0.59
RNF6-203ENST00000381588 HRCP23327 699 aa18.7■□□□□ 0.58
RNF6-203ENST00000381588 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
RNF6-203ENST00000381588 PCGF6Q9BYE7 350 aa18.57■□□□□ 0.56
RNF6-203ENST00000381588 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
RNF6-203ENST00000381588 ZCCHC6Q5VYS8 1495 aaKnown RBP18.34■□□□□ 0.53
RNF6-203ENST00000381588 TTBK1Q5TCY1 1321 aaPredicted RBP18.31■□□□□ 0.52
RNF6-203ENST00000381588 RANGAP1P46060 587 aaPredicted RBP18.27■□□□□ 0.52
RNF6-203ENST00000381588 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
RNF6-203ENST00000381588 LOC105371045A0A1W2PR82 267 aa18.25■□□□□ 0.51
RNF6-203ENST00000381588 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
RNF6-203ENST00000381588 CCDC180Q9P1Z9 1646 aa18.2■□□□□ 0.5
RNF6-203ENST00000381588 SCRIBQ14160 1630 aa18.13■□□□□ 0.49
RNF6-203ENST00000381588 MYT1Q01538 1121 aa18.06■□□□□ 0.48
RNF6-203ENST00000381588 UBTFP17480 764 aaKnown RBP17.88■□□□□ 0.45
RNF6-203ENST00000381588 ATP1B4Q9UN42 357 aaPredicted RBP17.67■□□□□ 0.42
RNF6-203ENST00000381588 GTF3C3Q9Y5Q9 886 aa17.67■□□□□ 0.42
RNF6-203ENST00000381588 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
RNF6-203ENST00000381588 APLP2Q06481 763 aa17.62■□□□□ 0.41
RNF6-203ENST00000381588 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
RNF6-203ENST00000381588 NEUROD1Q13562 356 aa17.59■□□□□ 0.41
RNF6-203ENST00000381588 RB1CC1Q8TDY2 1594 aa17.51■□□□□ 0.39
RNF6-203ENST00000381588 ACIN1Q9UKV3 1341 aaKnown RBP17.49■□□□□ 0.39
RNF6-203ENST00000381588 NACADO15069 1562 aa17.47■□□□□ 0.39
RNF6-203ENST00000381588 MYO15BQ96JP2 1530 aa17.45■□□□□ 0.38
RNF6-203ENST00000381588 YTHDC1Q96MU7 727 aaKnown RBP17.44■□□□□ 0.38
RNF6-203ENST00000381588 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
RNF6-203ENST00000381588 BCL11AQ9H165 835 aa17.37■□□□□ 0.37
RNF6-203ENST00000381588 CENPBP07199 599 aaPredicted RBP17.33■□□□□ 0.36
RNF6-203ENST00000381588 ITGAEP38570 1179 aa17.31■□□□□ 0.36
RNF6-203ENST00000381588 CCER1Q8TC90 406 aaPredicted RBP17.31■□□□□ 0.36
RNF6-203ENST00000381588 MROH2BQ7Z745 1585 aa17.31■□□□□ 0.36
RNF6-203ENST00000381588 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
RNF6-203ENST00000381588 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
RNF6-203ENST00000381588 CSRNP3Q8WYN3 585 aa17.22■□□□□ 0.35
RNF6-203ENST00000381588 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
RNF6-203ENST00000381588 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
RNF6-203ENST00000381588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
RNF6-203ENST00000381588 WIZO95785 1651 aa17.09■□□□□ 0.33
RNF6-203ENST00000381588 ARID3CA6NKF2 412 aa17.09■□□□□ 0.33
RNF6-203ENST00000381588 FBLN2P98095 1184 aa17.09■□□□□ 0.33
RNF6-203ENST00000381588 PRKCSHP14314 528 aaPredicted RBP17.07■□□□□ 0.32
RNF6-203ENST00000381588 BAZ1AQ9NRL2 1556 aaPredicted RBP17.05■□□□□ 0.32
RNF6-203ENST00000381588 DIEXFQ68CQ4 756 aaKnown RBP17.05■□□□□ 0.32
RNF6-203ENST00000381588 BAZ1BQ9UIG0 1483 aaKnown RBP17.02■□□□□ 0.32
RNF6-203ENST00000381588 CCDC88BA6NC98 1476 aa16.97■□□□□ 0.31
RNF6-203ENST00000381588 ABCC8Q09428 1581 aa16.95■□□□□ 0.3
RNF6-203ENST00000381588 SOGA1O94964 1423 aa16.91■□□□□ 0.3
RNF6-203ENST00000381588 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
RNF6-203ENST00000381588 FAM50AQ14320 339 aaKnown RBP16.85■□□□□ 0.29
RNF6-203ENST00000381588 ANP32EQ9BTT0 268 aa16.81■□□□□ 0.28
RNF6-203ENST00000381588 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.27
RNF6-203ENST00000381588 ATAD2BQ9ULI0 1458 aa16.76■□□□□ 0.27
RNF6-203ENST00000381588 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
RNF6-203ENST00000381588 RUSC2Q8N2Y8 1516 aa16.71■□□□□ 0.27
RNF6-203ENST00000381588 BCANQ96GW7 911 aa16.68■□□□□ 0.26
RNF6-203ENST00000381588 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
RNF6-203ENST00000381588 CEP162Q5TB80 1403 aa16.64■□□□□ 0.26
RNF6-203ENST00000381588 MYT1LQ9UL68 1186 aa16.62■□□□□ 0.25
RNF6-203ENST00000381588 CNGB1Q14028 1251 aaPredicted RBP16.62■□□□□ 0.25
RNF6-203ENST00000381588 CLIP1P30622 1438 aa16.61■□□□□ 0.25
RNF6-203ENST00000381588 SMARCA2P51531 1590 aa16.58■□□□□ 0.24
RNF6-203ENST00000381588 MIER1Q8N108 512 aa16.56■□□□□ 0.24
RNF6-203ENST00000381588 BICRAQ9NZM4 1560 aa16.55■□□□□ 0.24
RNF6-203ENST00000381588 TDRD9Q8NDG6 1382 aaKnown RBP16.54■□□□□ 0.24
RNF6-203ENST00000381588 ZNF777Q9ULD5 760 aaPredicted RBP16.53■□□□□ 0.24
RNF6-203ENST00000381588 CUX2O14529 1486 aa16.51■□□□□ 0.23
RNF6-203ENST00000381588 TRIM52Q96A61 297 aa16.51■□□□□ 0.23
RNF6-203ENST00000381588 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
RNF6-203ENST00000381588 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
RNF6-203ENST00000381588 GOLGA3Q08378 1498 aa16.49■□□□□ 0.23
RNF6-203ENST00000381588 KIF27Q86VH2 1401 aa16.49■□□□□ 0.23
RNF6-203ENST00000381588 CHIC2Q9UKJ5 165 aa16.48■□□□□ 0.23
RNF6-203ENST00000381588 CADPSQ9ULU8 1353 aa16.48■□□□□ 0.23
RNF6-203ENST00000381588 POLR3GLQ9BT43 218 aa16.48■□□□□ 0.23
RNF6-203ENST00000381588 EIF4G1Q04637 1599 aaKnown RBP16.48■□□□□ 0.23
RNF6-203ENST00000381588 TNIKQ9UKE5 1360 aa16.47■□□□□ 0.23
RNF6-203ENST00000381588 SUPT16HQ9Y5B9 1047 aaKnown RBP16.43■□□□□ 0.22
RNF6-203ENST00000381588 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
RNF6-203ENST00000381588 KANK4Q5T7N3 995 aaPredicted RBP16.42■□□□□ 0.22
RNF6-203ENST00000381588 ANO8Q9HCE9 1232 aaPredicted RBP16.41■□□□□ 0.22
RNF6-203ENST00000381588 CARMIL1Q5VZK9 1371 aa16.41■□□□□ 0.22
RNF6-203ENST00000381588 EEA1Q15075 1411 aa16.4■□□□□ 0.22
RNF6-203ENST00000381588 ERCC6Q03468 1493 aa16.39■□□□□ 0.21
RNF6-203ENST00000381588 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
RNF6-203ENST00000381588 ZNF316A6NFI3 1004 aaPredicted RBP16.39■□□□□ 0.21
RNF6-203ENST00000381588 NESP48681 1621 aa16.38■□□□□ 0.21
RNF6-203ENST00000381588 UNC13AQ9UPW8 1703 aa16.38■□□□□ 0.21
RNF6-203ENST00000381588 RAPGEF2Q9Y4G8 1499 aa16.38■□□□□ 0.21
RNF6-203ENST00000381588 CCDC136Q96JN2 1154 aa16.37■□□□□ 0.21
RNF6-203ENST00000381588 ZNF326Q5BKZ1 582 aaKnown RBP16.34■□□□□ 0.21
RNF6-203ENST00000381588 NCAPD3P42695 1498 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms