RNA–Protein interactions for RNA: ENST00000381341.6

DDX1-202, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DDX1, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-202ENST00000381341 NISCHQ9Y2I1 1504 aa30.86■■■□□ 2.53
DDX1-202ENST00000381341 SHROOM4Q9ULL8 1493 aa26.96■■□□□ 1.91
DDX1-202ENST00000381341 CCDC180Q9P1Z9 1646 aa26.7■■□□□ 1.87
DDX1-202ENST00000381341 SUPT5HO00267 1087 aaKnown RBP26.61■■□□□ 1.85
DDX1-202ENST00000381341 ZCCHC6Q5VYS8 1495 aaKnown RBP26.18■■□□□ 1.78
DDX1-202ENST00000381341 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
DDX1-202ENST00000381341 CHIC1Q5VXU3 224 aa25.97■■□□□ 1.75
DDX1-202ENST00000381341 HRCP23327 699 aa25.92■■□□□ 1.74
DDX1-202ENST00000381341 DCAF8L2P0C7V8 631 aa25.77■■□□□ 1.72
DDX1-202ENST00000381341 PCGF6Q9BYE7 350 aa25.72■■□□□ 1.71
DDX1-202ENST00000381341 ABCC9O60706 1549 aa25.67■■□□□ 1.7
DDX1-202ENST00000381341 PPARGC1BQ86YN6 1023 aaKnown RBP25.53■■□□□ 1.68
DDX1-202ENST00000381341 LOC105371045A0A1W2PR82 267 aa25.37■■□□□ 1.65
DDX1-202ENST00000381341 DCAF1Q9Y4B6 1507 aa25.26■■□□□ 1.63
DDX1-202ENST00000381341 NACADO15069 1562 aa24.99■■□□□ 1.59
DDX1-202ENST00000381341 TRIM26Q12899 539 aaPredicted RBP24.96■■□□□ 1.59
DDX1-202ENST00000381341 RB1CC1Q8TDY2 1594 aa24.87■■□□□ 1.57
DDX1-202ENST00000381341 RSF1Q96T23 1441 aaPredicted RBP24.66■■□□□ 1.54
DDX1-202ENST00000381341 FAM9AQ8IZU1 332 aaPredicted RBP24.63■■□□□ 1.53
DDX1-202ENST00000381341 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
DDX1-202ENST00000381341 SCRIBQ14160 1630 aa24.61■■□□□ 1.53
DDX1-202ENST00000381341 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
DDX1-202ENST00000381341 ZEB1P37275 1124 aaPredicted RBP24.48■■□□□ 1.51
DDX1-202ENST00000381341 UNC13AQ9UPW8 1703 aa24.32■■□□□ 1.48
DDX1-202ENST00000381341 SCAF1Q9H7N4 1312 aaKnown RBP24.26■■□□□ 1.47
DDX1-202ENST00000381341 CECR2Q9BXF3 1484 aa24.2■■□□□ 1.46
DDX1-202ENST00000381341 PABPN1Q86U42 306 aaKnown RBP eCLIP24.16■■□□□ 1.46
DDX1-202ENST00000381341 BICRAQ9NZM4 1560 aa24.14■■□□□ 1.45
DDX1-202ENST00000381341 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
DDX1-202ENST00000381341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.05■■□□□ 1.44
DDX1-202ENST00000381341 WIZO95785 1651 aa24.04■■□□□ 1.44
DDX1-202ENST00000381341 PELP1Q8IZL8 1130 aaKnown RBP23.98■■□□□ 1.43
DDX1-202ENST00000381341 CCER1Q8TC90 406 aaPredicted RBP23.92■■□□□ 1.42
DDX1-202ENST00000381341 TTBK1Q5TCY1 1321 aaPredicted RBP23.85■■□□□ 1.41
DDX1-202ENST00000381341 EIF4G1Q04637 1599 aaKnown RBP23.81■■□□□ 1.4
DDX1-202ENST00000381341 NEUROD1Q13562 356 aa23.8■■□□□ 1.4
DDX1-202ENST00000381341 BAZ1AQ9NRL2 1556 aaPredicted RBP23.79■■□□□ 1.4
DDX1-202ENST00000381341 ACIN1Q9UKV3 1341 aaKnown RBP23.78■■□□□ 1.4
DDX1-202ENST00000381341 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
DDX1-202ENST00000381341 DIEXFQ68CQ4 756 aaKnown RBP23.69■■□□□ 1.38
DDX1-202ENST00000381341 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
DDX1-202ENST00000381341 CEP162Q5TB80 1403 aa23.6■■□□□ 1.37
DDX1-202ENST00000381341 GTF3C3Q9Y5Q9 886 aa23.59■■□□□ 1.37
DDX1-202ENST00000381341 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.37
DDX1-202ENST00000381341 SOGA1O94964 1423 aa23.57■■□□□ 1.36
DDX1-202ENST00000381341 TOP2AP11388 1531 aaKnown RBP23.52■■□□□ 1.36
DDX1-202ENST00000381341 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
DDX1-202ENST00000381341 CENPBP07199 599 aaPredicted RBP23.48■■□□□ 1.35
DDX1-202ENST00000381341 RUSC2Q8N2Y8 1516 aa23.47■■□□□ 1.35
DDX1-202ENST00000381341 SMARCA2P51531 1590 aa23.47■■□□□ 1.35
DDX1-202ENST00000381341 TNIKQ9UKE5 1360 aa23.44■■□□□ 1.34
DDX1-202ENST00000381341 UBTFP17480 764 aaKnown RBP23.42■■□□□ 1.34
DDX1-202ENST00000381341 CSRNP3Q8WYN3 585 aa23.39■■□□□ 1.33
DDX1-202ENST00000381341 ZNF316A6NFI3 1004 aaPredicted RBP23.35■■□□□ 1.33
DDX1-202ENST00000381341 YTHDC1Q96MU7 727 aaKnown RBP23.31■■□□□ 1.32
DDX1-202ENST00000381341 EEA1Q15075 1411 aa23.25■■□□□ 1.31
DDX1-202ENST00000381341 HNRNPUL2Q1KMD3 747 aaKnown RBP23.25■■□□□ 1.31
DDX1-202ENST00000381341 GOLGA3Q08378 1498 aa23.24■■□□□ 1.31
DDX1-202ENST00000381341 ATAD2BQ9ULI0 1458 aa23.23■■□□□ 1.31
DDX1-202ENST00000381341 PEG3Q9GZU2 1588 aa23.22■■□□□ 1.31
DDX1-202ENST00000381341 CC2D2AQ9P2K1 1620 aa23.19■■□□□ 1.3
DDX1-202ENST00000381341 MIER1Q8N108 512 aa23.18■■□□□ 1.3
DDX1-202ENST00000381341 NCAPD3P42695 1498 aa23.1■■□□□ 1.29
DDX1-202ENST00000381341 BAZ1BQ9UIG0 1483 aaKnown RBP23.07■■□□□ 1.28
DDX1-202ENST00000381341 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
DDX1-202ENST00000381341 CLIP1P30622 1438 aa23.05■■□□□ 1.28
DDX1-202ENST00000381341 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
DDX1-202ENST00000381341 RANGAP1P46060 587 aaPredicted RBP23.04■■□□□ 1.28
DDX1-202ENST00000381341 DNAJC5BQ9UF47 199 aa23.03■■□□□ 1.28
DDX1-202ENST00000381341 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
DDX1-202ENST00000381341 KIF21BO75037 1637 aa22.99■■□□□ 1.27
DDX1-202ENST00000381341 VPS8Q8N3P4 1428 aa22.97■■□□□ 1.27
DDX1-202ENST00000381341 RAPGEF2Q9Y4G8 1499 aa22.94■■□□□ 1.26
DDX1-202ENST00000381341 APLP2Q06481 763 aa22.9■■□□□ 1.26
DDX1-202ENST00000381341 MYT1Q01538 1121 aa22.8■■□□□ 1.24
DDX1-202ENST00000381341 DHX57Q6P158 1386 aaKnown RBP22.73■■□□□ 1.23
DDX1-202ENST00000381341 KANK4Q5T7N3 995 aaPredicted RBP22.69■■□□□ 1.22
DDX1-202ENST00000381341 ARAP1Q96P48 1450 aa22.65■■□□□ 1.22
DDX1-202ENST00000381341 TOP2BQ02880 1626 aa22.64■■□□□ 1.21
DDX1-202ENST00000381341 CLSPNQ9HAW4 1339 aa22.6■■□□□ 1.21
DDX1-202ENST00000381341 SUPT16HQ9Y5B9 1047 aaKnown RBP22.58■■□□□ 1.21
DDX1-202ENST00000381341 PRXQ9BXM0 1461 aa22.55■■□□□ 1.2
DDX1-202ENST00000381341 ERICH3Q5RHP9 1530 aa22.52■■□□□ 1.2
DDX1-202ENST00000381341 BIVM-ERCC5R4GMW8 1640 aa22.52■■□□□ 1.2
DDX1-202ENST00000381341 ITGAEP38570 1179 aa22.5■■□□□ 1.19
DDX1-202ENST00000381341 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
DDX1-202ENST00000381341 RRBP1Q9P2E9 1410 aaKnown RBP22.48■■□□□ 1.19
DDX1-202ENST00000381341 CFTRP13569 1480 aa22.48■■□□□ 1.19
DDX1-202ENST00000381341 KCNH8Q96L42 1107 aa22.45■■□□□ 1.18
DDX1-202ENST00000381341 NESP48681 1621 aa22.42■■□□□ 1.18
DDX1-202ENST00000381341 CCNB3Q8WWL7 1395 aa22.41■■□□□ 1.18
DDX1-202ENST00000381341 CUX1P39880 1505 aa22.4■■□□□ 1.18
DDX1-202ENST00000381341 CUX2O14529 1486 aa22.38■■□□□ 1.17
DDX1-202ENST00000381341 ARHGAP35Q9NRY4 1499 aa22.37■■□□□ 1.17
DDX1-202ENST00000381341 LAMC3Q9Y6N6 1575 aa22.35■■□□□ 1.17
DDX1-202ENST00000381341 TSHZ2Q9NRE2 1034 aa22.34■■□□□ 1.17
DDX1-202ENST00000381341 KIF27Q86VH2 1401 aa22.34■■□□□ 1.17
DDX1-202ENST00000381341 RAB3GAP2Q9H2M9 1393 aa22.32■■□□□ 1.16
DDX1-202ENST00000381341 MAPKBP1O60336 1514 aa22.3■■□□□ 1.16
DDX1-202ENST00000381341 PRDM2Q13029 1718 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms