RNA–Protein interactions for RNA: ENST00000380981.3

LINC01310-201, Transcript of long intergenic non-protein coding RNA 1310, humanhuman

TSL 2 BASIC

Gene LINC01310, Length 4,015 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01310-201ENST00000380981 NISCHQ9Y2I1 1504 aa20.91■□□□□ 0.94
LINC01310-201ENST00000380981 CCDC180Q9P1Z9 1646 aa18.08■□□□□ 0.49
LINC01310-201ENST00000380981 ZCCHC6Q5VYS8 1495 aaKnown RBP17.64■□□□□ 0.41
LINC01310-201ENST00000380981 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.4
LINC01310-201ENST00000380981 SHROOM4Q9ULL8 1493 aa17.52■□□□□ 0.4
LINC01310-201ENST00000380981 SUPT5HO00267 1087 aaKnown RBP17.41■□□□□ 0.38
LINC01310-201ENST00000380981 DCAF1Q9Y4B6 1507 aa17.24■□□□□ 0.35
LINC01310-201ENST00000380981 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
LINC01310-201ENST00000380981 ABCC9O60706 1549 aa16.9■□□□□ 0.3
LINC01310-201ENST00000380981 SCRIBQ14160 1630 aa16.74■□□□□ 0.27
LINC01310-201ENST00000380981 NACADO15069 1562 aa16.73■□□□□ 0.27
LINC01310-201ENST00000380981 RB1CC1Q8TDY2 1594 aa16.52■□□□□ 0.24
LINC01310-201ENST00000380981 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
LINC01310-201ENST00000380981 UNC13AQ9UPW8 1703 aa16.44■□□□□ 0.22
LINC01310-201ENST00000380981 PCGF6Q9BYE7 350 aa16.37■□□□□ 0.21
LINC01310-201ENST00000380981 RSF1Q96T23 1441 aaPredicted RBP16.35■□□□□ 0.21
LINC01310-201ENST00000380981 CECR2Q9BXF3 1484 aa16.31■□□□□ 0.2
LINC01310-201ENST00000380981 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
LINC01310-201ENST00000380981 MROH2BQ7Z745 1585 aa16.23■□□□□ 0.19
LINC01310-201ENST00000380981 FAM9AQ8IZU1 332 aaPredicted RBP16.21■□□□□ 0.19
LINC01310-201ENST00000380981 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.19
LINC01310-201ENST00000380981 LOC105371045A0A1W2PR82 267 aa16.16■□□□□ 0.18
LINC01310-201ENST00000380981 WIZO95785 1651 aa16.14■□□□□ 0.17
LINC01310-201ENST00000380981 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
LINC01310-201ENST00000380981 BAZ1AQ9NRL2 1556 aaPredicted RBP16.07■□□□□ 0.16
LINC01310-201ENST00000380981 HRCP23327 699 aa16.06■□□□□ 0.16
LINC01310-201ENST00000380981 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
LINC01310-201ENST00000380981 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
LINC01310-201ENST00000380981 TRIM26Q12899 539 aaPredicted RBP15.88■□□□□ 0.13
LINC01310-201ENST00000380981 TOP2AP11388 1531 aaKnown RBP15.88■□□□□ 0.13
LINC01310-201ENST00000380981 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
LINC01310-201ENST00000380981 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.13
LINC01310-201ENST00000380981 PPARGC1BQ86YN6 1023 aaKnown RBP15.81■□□□□ 0.12
LINC01310-201ENST00000380981 SMARCA2P51531 1590 aa15.8■□□□□ 0.12
LINC01310-201ENST00000380981 CCDC88BA6NC98 1476 aa15.76■□□□□ 0.11
LINC01310-201ENST00000380981 TTBK1Q5TCY1 1321 aaPredicted RBP15.73■□□□□ 0.11
LINC01310-201ENST00000380981 ZEB1P37275 1124 aaPredicted RBP15.71■□□□□ 0.11
LINC01310-201ENST00000380981 ATAD2BQ9ULI0 1458 aa15.69■□□□□ 0.1
LINC01310-201ENST00000380981 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
LINC01310-201ENST00000380981 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
LINC01310-201ENST00000380981 CCER1Q8TC90 406 aaPredicted RBP15.56■□□□□ 0.08
LINC01310-201ENST00000380981 BAZ1BQ9UIG0 1483 aaKnown RBP15.56■□□□□ 0.08
LINC01310-201ENST00000380981 HMGXB3Q12766 1538 aa15.48■□□□□ 0.07
LINC01310-201ENST00000380981 NCAPD3P42695 1498 aa15.47■□□□□ 0.07
LINC01310-201ENST00000380981 APLP2Q06481 763 aa15.46■□□□□ 0.07
LINC01310-201ENST00000380981 RANGAP1P46060 587 aaPredicted RBP15.46■□□□□ 0.07
LINC01310-201ENST00000380981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.36■□□□□ 0.05
LINC01310-201ENST00000380981 SYNJ1O43426 1573 aa15.36■□□□□ 0.05
LINC01310-201ENST00000380981 CC2D2AQ9P2K1 1620 aa15.33■□□□□ 0.05
LINC01310-201ENST00000380981 SOGA1O94964 1423 aa15.3■□□□□ 0.04
LINC01310-201ENST00000380981 WRNQ14191 1432 aaPredicted RBP eCLIP15.3■□□□□ 0.04
LINC01310-201ENST00000380981 RUSC2Q8N2Y8 1516 aa15.29■□□□□ 0.04
LINC01310-201ENST00000380981 CFTRP13569 1480 aa15.22■□□□□ 0.03
LINC01310-201ENST00000380981 PRDM2Q13029 1718 aa15.22■□□□□ 0.03
LINC01310-201ENST00000380981 CSRNP3Q8WYN3 585 aa15.21■□□□□ 0.03
LINC01310-201ENST00000380981 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.03
LINC01310-201ENST00000380981 TOP2BQ02880 1626 aa15.21■□□□□ 0.03
LINC01310-201ENST00000380981 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
LINC01310-201ENST00000380981 CUX1P39880 1505 aa15.15■□□□□ 0.02
LINC01310-201ENST00000380981 CENPBP07199 599 aaPredicted RBP15.14■□□□□ 0.01
LINC01310-201ENST00000380981 EEA1Q15075 1411 aa15.12■□□□□ 0.01
LINC01310-201ENST00000380981 CADPSQ9ULU8 1353 aa15.07■□□□□ 0
LINC01310-201ENST00000380981 DIEXFQ68CQ4 756 aaKnown RBP15.06■□□□□ 0
LINC01310-201ENST00000380981 KIF21BO75037 1637 aa15.05■□□□□ -0
LINC01310-201ENST00000380981 YTHDC1Q96MU7 727 aaKnown RBP15.02■□□□□ -0
LINC01310-201ENST00000380981 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
LINC01310-201ENST00000380981 TNIKQ9UKE5 1360 aa15□□□□□ -0.01
LINC01310-201ENST00000380981 NESP48681 1621 aa15□□□□□ -0.01
LINC01310-201ENST00000380981 ATP1B4Q9UN42 357 aaPredicted RBP14.99□□□□□ -0.01
LINC01310-201ENST00000380981 GOLGA3Q08378 1498 aa14.99□□□□□ -0.01
LINC01310-201ENST00000380981 CEP162Q5TB80 1403 aa14.99□□□□□ -0.01
LINC01310-201ENST00000380981 RAPGEF2Q9Y4G8 1499 aa14.96□□□□□ -0.01
LINC01310-201ENST00000380981 CEP164Q9UPV0 1460 aa14.96□□□□□ -0.02
LINC01310-201ENST00000380981 ITGAEP38570 1179 aa14.94□□□□□ -0.02
LINC01310-201ENST00000380981 FANCD2Q9BXW9 1451 aa14.93□□□□□ -0.02
LINC01310-201ENST00000380981 PRXQ9BXM0 1461 aa14.91□□□□□ -0.02
LINC01310-201ENST00000380981 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
LINC01310-201ENST00000380981 LAMC3Q9Y6N6 1575 aa14.89□□□□□ -0.03
LINC01310-201ENST00000380981 PELP1Q8IZL8 1130 aaKnown RBP14.88□□□□□ -0.03
LINC01310-201ENST00000380981 ERICH3Q5RHP9 1530 aa14.86□□□□□ -0.03
LINC01310-201ENST00000380981 ZNF316A6NFI3 1004 aaPredicted RBP14.86□□□□□ -0.03
LINC01310-201ENST00000380981 DNMBPQ6XZF7 1577 aa14.85□□□□□ -0.03
LINC01310-201ENST00000380981 KIF27Q86VH2 1401 aa14.83□□□□□ -0.04
LINC01310-201ENST00000380981 TOPBP1Q92547 1522 aa14.83□□□□□ -0.04
LINC01310-201ENST00000380981 KIF21AQ7Z4S6 1674 aa14.83□□□□□ -0.04
LINC01310-201ENST00000380981 CLIP1P30622 1438 aa14.82□□□□□ -0.04
LINC01310-201ENST00000380981 URB2Q14146 1524 aaKnown RBP14.82□□□□□ -0.04
LINC01310-201ENST00000380981 CUX2O14529 1486 aa14.8□□□□□ -0.04
LINC01310-201ENST00000380981 ACIN1Q9UKV3 1341 aaKnown RBP14.8□□□□□ -0.04
LINC01310-201ENST00000380981 POLA1P09884 1462 aaPredicted RBP14.79□□□□□ -0.04
LINC01310-201ENST00000380981 WDR97A6NE52 1622 aa14.79□□□□□ -0.04
LINC01310-201ENST00000380981 RAD54L2Q9Y4B4 1467 aa14.78□□□□□ -0.04
LINC01310-201ENST00000380981 IGF1RP08069 1367 aa14.77□□□□□ -0.04
LINC01310-201ENST00000380981 GTF3C3Q9Y5Q9 886 aa14.77□□□□□ -0.05
LINC01310-201ENST00000380981 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
LINC01310-201ENST00000380981 ABCA10Q8WWZ4 1543 aa14.74□□□□□ -0.05
LINC01310-201ENST00000380981 NEUROD1Q13562 356 aa14.71□□□□□ -0.05
LINC01310-201ENST00000380981 ARAP1Q96P48 1450 aa14.71□□□□□ -0.05
LINC01310-201ENST00000380981 VPS8Q8N3P4 1428 aa14.69□□□□□ -0.06
LINC01310-201ENST00000380981 PDS5BQ9NTI5 1447 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms