RNA–Protein interactions for RNA: ENST00000380894.5

FREM1-203, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best) BASIC

Gene FREM1, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-203ENST00000380894 NISCHQ9Y2I1 1504 aa19.75■□□□□ 0.75
FREM1-203ENST00000380894 CCDC180Q9P1Z9 1646 aa17.02■□□□□ 0.31
FREM1-203ENST00000380894 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
FREM1-203ENST00000380894 SHROOM4Q9ULL8 1493 aa16.36■□□□□ 0.21
FREM1-203ENST00000380894 DCAF1Q9Y4B6 1507 aa16.31■□□□□ 0.2
FREM1-203ENST00000380894 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
FREM1-203ENST00000380894 MYO15BQ96JP2 1530 aa16■□□□□ 0.15
FREM1-203ENST00000380894 SUPT5HO00267 1087 aaKnown RBP15.9■□□□□ 0.14
FREM1-203ENST00000380894 ABCC9O60706 1549 aa15.87■□□□□ 0.13
FREM1-203ENST00000380894 NACADO15069 1562 aa15.8■□□□□ 0.12
FREM1-203ENST00000380894 SCRIBQ14160 1630 aa15.73■□□□□ 0.11
FREM1-203ENST00000380894 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.08
FREM1-203ENST00000380894 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
FREM1-203ENST00000380894 CHIC1Q5VXU3 224 aa15.41■□□□□ 0.06
FREM1-203ENST00000380894 CECR2Q9BXF3 1484 aa15.35■□□□□ 0.05
FREM1-203ENST00000380894 UNC13AQ9UPW8 1703 aa15.3■□□□□ 0.04
FREM1-203ENST00000380894 MROH2BQ7Z745 1585 aa15.28■□□□□ 0.04
FREM1-203ENST00000380894 BAZ1AQ9NRL2 1556 aaPredicted RBP15.2■□□□□ 0.02
FREM1-203ENST00000380894 WIZO95785 1651 aa15.17■□□□□ 0.02
FREM1-203ENST00000380894 BICRAQ9NZM4 1560 aa15.15■□□□□ 0.02
FREM1-203ENST00000380894 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
FREM1-203ENST00000380894 PABPN1Q86U42 306 aaKnown RBP eCLIP15.07■□□□□ 07e-8■□□□□ 11.1
FREM1-203ENST00000380894 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
FREM1-203ENST00000380894 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
FREM1-203ENST00000380894 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
FREM1-203ENST00000380894 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
FREM1-203ENST00000380894 EIF4G1Q04637 1599 aaKnown RBP14.88□□□□□ -0.03
FREM1-203ENST00000380894 SMARCA2P51531 1590 aa14.88□□□□□ -0.03
FREM1-203ENST00000380894 LOC105371045A0A1W2PR82 267 aa14.86□□□□□ -0.03
FREM1-203ENST00000380894 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
FREM1-203ENST00000380894 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
FREM1-203ENST00000380894 FAM9AQ8IZU1 332 aaPredicted RBP14.67□□□□□ -0.06
FREM1-203ENST00000380894 ABCC8Q09428 1581 aa14.66□□□□□ -0.06
FREM1-203ENST00000380894 NCAPD3P42695 1498 aa14.61□□□□□ -0.07
FREM1-203ENST00000380894 HMGXB3Q12766 1538 aa14.58□□□□□ -0.07
FREM1-203ENST00000380894 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
FREM1-203ENST00000380894 WRNQ14191 1432 aaPredicted RBP eCLIP14.52□□□□□ -0.09
FREM1-203ENST00000380894 PCGF6Q9BYE7 350 aa14.48□□□□□ -0.09
FREM1-203ENST00000380894 SOGA1O94964 1423 aa14.47□□□□□ -0.09
FREM1-203ENST00000380894 EEA1Q15075 1411 aa14.46□□□□□ -0.09
FREM1-203ENST00000380894 EHMT2Q96KQ7 1210 aa14.46□□□□□ -0.1
FREM1-203ENST00000380894 SYNJ1O43426 1573 aa14.45□□□□□ -0.1
FREM1-203ENST00000380894 RUSC2Q8N2Y8 1516 aa14.42□□□□□ -0.1
FREM1-203ENST00000380894 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
FREM1-203ENST00000380894 TRIM26Q12899 539 aaPredicted RBP14.39□□□□□ -0.11
FREM1-203ENST00000380894 CFTRP13569 1480 aa14.38□□□□□ -0.11
FREM1-203ENST00000380894 TOP2BQ02880 1626 aa14.36□□□□□ -0.11
FREM1-203ENST00000380894 CC2D2AQ9P2K1 1620 aa14.36□□□□□ -0.11
FREM1-203ENST00000380894 MYT1Q01538 1121 aa14.35□□□□□ -0.11
FREM1-203ENST00000380894 TNIKQ9UKE5 1360 aa14.33□□□□□ -0.12
FREM1-203ENST00000380894 BIVM-ERCC5R4GMW8 1640 aa14.32□□□□□ -0.12
FREM1-203ENST00000380894 HRCP23327 699 aa14.32□□□□□ -0.12
FREM1-203ENST00000380894 GOLGA3Q08378 1498 aa14.28□□□□□ -0.12
FREM1-203ENST00000380894 CADPSQ9ULU8 1353 aa14.27□□□□□ -0.13
FREM1-203ENST00000380894 CUX1P39880 1505 aa14.26□□□□□ -0.13
FREM1-203ENST00000380894 CEP162Q5TB80 1403 aa14.26□□□□□ -0.13
FREM1-203ENST00000380894 PRDM2Q13029 1718 aa14.26□□□□□ -0.13
FREM1-203ENST00000380894 KIF21BO75037 1637 aa14.26□□□□□ -0.13
FREM1-203ENST00000380894 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
FREM1-203ENST00000380894 UBTFP17480 764 aaKnown RBP14.23□□□□□ -0.13
FREM1-203ENST00000380894 RAPGEF2Q9Y4G8 1499 aa14.15□□□□□ -0.14
FREM1-203ENST00000380894 PRXQ9BXM0 1461 aa14.12□□□□□ -0.15
FREM1-203ENST00000380894 KIF27Q86VH2 1401 aa14.12□□□□□ -0.15
FREM1-203ENST00000380894 PPARGC1BQ86YN6 1023 aaKnown RBP14.12□□□□□ -0.15
FREM1-203ENST00000380894 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
FREM1-203ENST00000380894 FANCD2Q9BXW9 1451 aa14.09□□□□□ -0.15
FREM1-203ENST00000380894 CLIP1P30622 1438 aa14.08□□□□□ -0.16
FREM1-203ENST00000380894 NESP48681 1621 aa14.05□□□□□ -0.16
FREM1-203ENST00000380894 FGD5Q6ZNL6 1462 aa14.04□□□□□ -0.16
FREM1-203ENST00000380894 LAMC3Q9Y6N6 1575 aa14.03□□□□□ -0.16
FREM1-203ENST00000380894 CUX2O14529 1486 aa14.02□□□□□ -0.17
FREM1-203ENST00000380894 DNMBPQ6XZF7 1577 aa14.01□□□□□ -0.17
FREM1-203ENST00000380894 IGF1RP08069 1367 aa14.01□□□□□ -0.17
FREM1-203ENST00000380894 VPS8Q8N3P4 1428 aa14□□□□□ -0.17
FREM1-203ENST00000380894 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
FREM1-203ENST00000380894 TOPBP1Q92547 1522 aa13.98□□□□□ -0.17
FREM1-203ENST00000380894 ZEB1P37275 1124 aaPredicted RBP13.96□□□□□ -0.18
FREM1-203ENST00000380894 POLA1P09884 1462 aaPredicted RBP13.94□□□□□ -0.18
FREM1-203ENST00000380894 ABCA10Q8WWZ4 1543 aa13.93□□□□□ -0.18
FREM1-203ENST00000380894 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
FREM1-203ENST00000380894 CARMIL1Q5VZK9 1371 aa13.92□□□□□ -0.18
FREM1-203ENST00000380894 URB2Q14146 1524 aaKnown RBP13.92□□□□□ -0.18
FREM1-203ENST00000380894 RAD54L2Q9Y4B4 1467 aa13.92□□□□□ -0.18
FREM1-203ENST00000380894 RANGAP1P46060 587 aaPredicted RBP13.91□□□□□ -0.18
FREM1-203ENST00000380894 ARAP1Q96P48 1450 aa13.91□□□□□ -0.18
FREM1-203ENST00000380894 TTBK1Q5TCY1 1321 aaPredicted RBP13.91□□□□□ -0.18
FREM1-203ENST00000380894 APLP2Q06481 763 aa13.86□□□□□ -0.19
FREM1-203ENST00000380894 ARHGAP35Q9NRY4 1499 aa13.85□□□□□ -0.19
FREM1-203ENST00000380894 KIF21AQ7Z4S6 1674 aa13.84□□□□□ -0.19
FREM1-203ENST00000380894 WDR97A6NE52 1622 aa13.83□□□□□ -0.2
FREM1-203ENST00000380894 CUL7Q14999 1698 aa13.8□□□□□ -0.2
FREM1-203ENST00000380894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.79□□□□□ -0.2
FREM1-203ENST00000380894 ABCA5Q8WWZ7 1642 aa13.78□□□□□ -0.2
FREM1-203ENST00000380894 TDRD9Q8NDG6 1382 aaKnown RBP13.76□□□□□ -0.21
FREM1-203ENST00000380894 CCER1Q8TC90 406 aaPredicted RBP13.75□□□□□ -0.21
FREM1-203ENST00000380894 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
FREM1-203ENST00000380894 GAPVD1Q14C86 1478 aa13.75□□□□□ -0.21
FREM1-203ENST00000380894 KANK4Q5T7N3 995 aaPredicted RBP13.74□□□□□ -0.21
FREM1-203ENST00000380894 MRC2Q9UBG0 1479 aa13.73□□□□□ -0.21
FREM1-203ENST00000380894 MAP3K1Q13233 1512 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms