RNA–Protein interactions for RNA: ENST00000380739.5

SERPINB1-201, Transcript of serpin family B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERPINB1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINB1-201ENST00000380739 NISCHQ9Y2I1 1504 aa28.56■■■□□ 2.16
SERPINB1-201ENST00000380739 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
SERPINB1-201ENST00000380739 ZCCHC6Q5VYS8 1495 aaKnown RBP24.03■■□□□ 1.44
SERPINB1-201ENST00000380739 SHROOM4Q9ULL8 1493 aa23.89■■□□□ 1.42
SERPINB1-201ENST00000380739 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
SERPINB1-201ENST00000380739 DCAF1Q9Y4B6 1507 aa23.42■■□□□ 1.34
SERPINB1-201ENST00000380739 ABCC9O60706 1549 aa23.37■■□□□ 1.33
SERPINB1-201ENST00000380739 SUPT5HO00267 1087 aaKnown RBP23.1■■□□□ 1.29
SERPINB1-201ENST00000380739 MYO15BQ96JP2 1530 aa22.98■■□□□ 1.27
SERPINB1-201ENST00000380739 SCRIBQ14160 1630 aa22.98■■□□□ 1.27
SERPINB1-201ENST00000380739 NACADO15069 1562 aa22.88■■□□□ 1.25
SERPINB1-201ENST00000380739 RB1CC1Q8TDY2 1594 aa22.67■■□□□ 1.22
SERPINB1-201ENST00000380739 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
SERPINB1-201ENST00000380739 UNC13AQ9UPW8 1703 aa22.36■■□□□ 1.17
SERPINB1-201ENST00000380739 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
SERPINB1-201ENST00000380739 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
SERPINB1-201ENST00000380739 HRCP23327 699 aa22.25■■□□□ 1.15
SERPINB1-201ENST00000380739 PABPN1Q86U42 306 aaKnown RBP eCLIP22.2■■□□□ 1.14
SERPINB1-201ENST00000380739 MROH2BQ7Z745 1585 aa22.2■■□□□ 1.14
SERPINB1-201ENST00000380739 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
SERPINB1-201ENST00000380739 WIZO95785 1651 aa22.05■■□□□ 1.12
SERPINB1-201ENST00000380739 BAZ1AQ9NRL2 1556 aaPredicted RBP21.99■■□□□ 1.11
SERPINB1-201ENST00000380739 PCGF6Q9BYE7 350 aa21.93■■□□□ 1.1
SERPINB1-201ENST00000380739 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
SERPINB1-201ENST00000380739 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
SERPINB1-201ENST00000380739 TOP2AP11388 1531 aaKnown RBP21.67■■□□□ 1.06
SERPINB1-201ENST00000380739 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.06
SERPINB1-201ENST00000380739 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
SERPINB1-201ENST00000380739 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
SERPINB1-201ENST00000380739 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
SERPINB1-201ENST00000380739 PPARGC1BQ86YN6 1023 aaKnown RBP21.53■■□□□ 1.04
SERPINB1-201ENST00000380739 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
SERPINB1-201ENST00000380739 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
SERPINB1-201ENST00000380739 EIF4G1Q04637 1599 aaKnown RBP21.45■■□□□ 1.02
SERPINB1-201ENST00000380739 BAZ1BQ9UIG0 1483 aaKnown RBP21.4■■□□□ 1.02
SERPINB1-201ENST00000380739 FAM9AQ8IZU1 332 aaPredicted RBP21.38■■□□□ 1.01
SERPINB1-201ENST00000380739 ZEB1P37275 1124 aaPredicted RBP21.36■■□□□ 1.01
SERPINB1-201ENST00000380739 ABCC8Q09428 1581 aa21.32■■□□□ 1
SERPINB1-201ENST00000380739 EHMT2Q96KQ7 1210 aa21.24■□□□□ 0.99
SERPINB1-201ENST00000380739 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
SERPINB1-201ENST00000380739 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
SERPINB1-201ENST00000380739 CC2D2AQ9P2K1 1620 aa21.04■□□□□ 0.96
SERPINB1-201ENST00000380739 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
SERPINB1-201ENST00000380739 SOGA1O94964 1423 aa20.97■□□□□ 0.95
SERPINB1-201ENST00000380739 SYNJ1O43426 1573 aa20.96■□□□□ 0.95
SERPINB1-201ENST00000380739 RUSC2Q8N2Y8 1516 aa20.92■□□□□ 0.94
SERPINB1-201ENST00000380739 CFTRP13569 1480 aa20.82■□□□□ 0.92
SERPINB1-201ENST00000380739 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
SERPINB1-201ENST00000380739 TOP2BQ02880 1626 aa20.74■□□□□ 0.91
SERPINB1-201ENST00000380739 EEA1Q15075 1411 aa20.73■□□□□ 0.91
SERPINB1-201ENST00000380739 DNAJC5BQ9UF47 199 aa20.72■□□□□ 0.91
SERPINB1-201ENST00000380739 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
SERPINB1-201ENST00000380739 CUX1P39880 1505 aa20.7■□□□□ 0.9
SERPINB1-201ENST00000380739 BIVM-ERCC5R4GMW8 1640 aa20.68■□□□□ 0.9
SERPINB1-201ENST00000380739 TNIKQ9UKE5 1360 aa20.67■□□□□ 0.9
SERPINB1-201ENST00000380739 PRDM2Q13029 1718 aa20.65■□□□□ 0.9
SERPINB1-201ENST00000380739 CEP162Q5TB80 1403 aa20.63■□□□□ 0.89
SERPINB1-201ENST00000380739 NESP48681 1621 aa20.63■□□□□ 0.89
SERPINB1-201ENST00000380739 UBTFP17480 764 aaKnown RBP20.62■□□□□ 0.89
SERPINB1-201ENST00000380739 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
SERPINB1-201ENST00000380739 CCER1Q8TC90 406 aaPredicted RBP20.57■□□□□ 0.88
SERPINB1-201ENST00000380739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.56■□□□□ 0.88
SERPINB1-201ENST00000380739 GOLGA3Q08378 1498 aa20.55■□□□□ 0.88
SERPINB1-201ENST00000380739 SCAF1Q9H7N4 1312 aaKnown RBP20.55■□□□□ 0.88
SERPINB1-201ENST00000380739 FANCD2Q9BXW9 1451 aa20.54■□□□□ 0.88
SERPINB1-201ENST00000380739 CEP164Q9UPV0 1460 aa20.51■□□□□ 0.87
SERPINB1-201ENST00000380739 RAPGEF2Q9Y4G8 1499 aa20.49■□□□□ 0.87
SERPINB1-201ENST00000380739 KIF21BO75037 1637 aa20.48■□□□□ 0.87
SERPINB1-201ENST00000380739 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
SERPINB1-201ENST00000380739 RANGAP1P46060 587 aaPredicted RBP20.43■□□□□ 0.86
SERPINB1-201ENST00000380739 KIF27Q86VH2 1401 aa20.4■□□□□ 0.86
SERPINB1-201ENST00000380739 LAMC3Q9Y6N6 1575 aa20.39■□□□□ 0.85
SERPINB1-201ENST00000380739 CUX2O14529 1486 aa20.38■□□□□ 0.85
SERPINB1-201ENST00000380739 TTBK1Q5TCY1 1321 aaPredicted RBP20.37■□□□□ 0.85
SERPINB1-201ENST00000380739 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
SERPINB1-201ENST00000380739 PRXQ9BXM0 1461 aa20.35■□□□□ 0.85
SERPINB1-201ENST00000380739 DIEXFQ68CQ4 756 aaKnown RBP20.34■□□□□ 0.85
SERPINB1-201ENST00000380739 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
SERPINB1-201ENST00000380739 DNMBPQ6XZF7 1577 aa20.33■□□□□ 0.84
SERPINB1-201ENST00000380739 RAD54L2Q9Y4B4 1467 aa20.32■□□□□ 0.84
SERPINB1-201ENST00000380739 CLIP1P30622 1438 aa20.3■□□□□ 0.84
SERPINB1-201ENST00000380739 URB2Q14146 1524 aaKnown RBP20.29■□□□□ 0.84
SERPINB1-201ENST00000380739 KIF21AQ7Z4S6 1674 aa20.28■□□□□ 0.84
SERPINB1-201ENST00000380739 POLA1P09884 1462 aaPredicted RBP20.28■□□□□ 0.84
SERPINB1-201ENST00000380739 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
SERPINB1-201ENST00000380739 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
SERPINB1-201ENST00000380739 IGF1RP08069 1367 aa20.25■□□□□ 0.83
SERPINB1-201ENST00000380739 CENPBP07199 599 aaPredicted RBP20.23■□□□□ 0.83
SERPINB1-201ENST00000380739 NEUROD1Q13562 356 aa20.23■□□□□ 0.83
SERPINB1-201ENST00000380739 VPS8Q8N3P4 1428 aa20.21■□□□□ 0.83
SERPINB1-201ENST00000380739 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
SERPINB1-201ENST00000380739 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
SERPINB1-201ENST00000380739 CARMIL1Q5VZK9 1371 aa20.15■□□□□ 0.82
SERPINB1-201ENST00000380739 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
SERPINB1-201ENST00000380739 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
SERPINB1-201ENST00000380739 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
SERPINB1-201ENST00000380739 GTF3C3Q9Y5Q9 886 aa20.04■□□□□ 0.8
SERPINB1-201ENST00000380739 ARHGAP35Q9NRY4 1499 aa20.01■□□□□ 0.79
SERPINB1-201ENST00000380739 MRC2Q9UBG0 1479 aa20.01■□□□□ 0.79
SERPINB1-201ENST00000380739 APLP2Q06481 763 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms