RNA–Protein interactions for RNA: ENST00000377904.8

ASIC3-204, Transcript of acid sensing ion channel subunit 3, humanhuman

TSL 2

Gene ASIC3, Length 2,096 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC3-204ENST00000377904 NISCHQ9Y2I1 1504 aa37.86■■■■□ 3.65
ASIC3-204ENST00000377904 CCDC180Q9P1Z9 1646 aa32.84■■■□□ 2.85
ASIC3-204ENST00000377904 ZCCHC6Q5VYS8 1495 aaKnown RBP31.87■■■□□ 2.69
ASIC3-204ENST00000377904 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
ASIC3-204ENST00000377904 DCAF8L2P0C7V8 631 aa31.14■■■□□ 2.58
ASIC3-204ENST00000377904 SHROOM4Q9ULL8 1493 aa31.05■■■□□ 2.56
ASIC3-204ENST00000377904 MYO15BQ96JP2 1530 aa30.86■■■□□ 2.53
ASIC3-204ENST00000377904 ABCC9O60706 1549 aa30.83■■■□□ 2.53
ASIC3-204ENST00000377904 NACADO15069 1562 aa30.55■■■□□ 2.48
ASIC3-204ENST00000377904 SCRIBQ14160 1630 aa30.24■■■□□ 2.43
ASIC3-204ENST00000377904 RB1CC1Q8TDY2 1594 aa30.21■■■□□ 2.43
ASIC3-204ENST00000377904 SUPT5HO00267 1087 aaKnown RBP30.02■■■□□ 2.4
ASIC3-204ENST00000377904 UNC13AQ9UPW8 1703 aa29.56■■■□□ 2.32
ASIC3-204ENST00000377904 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
ASIC3-204ENST00000377904 CECR2Q9BXF3 1484 aa29.41■■■□□ 2.3
ASIC3-204ENST00000377904 BICRAQ9NZM4 1560 aa29.32■■■□□ 2.28
ASIC3-204ENST00000377904 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.28
ASIC3-204ENST00000377904 BAZ1AQ9NRL2 1556 aaPredicted RBP29.2■■■□□ 2.27
ASIC3-204ENST00000377904 PABPN1Q86U42 306 aaKnown RBP eCLIP29.15■■■□□ 2.26
ASIC3-204ENST00000377904 SMARCA4P51532 1647 aa29.02■■■□□ 2.24
ASIC3-204ENST00000377904 WIZO95785 1651 aa29■■■□□ 2.23
ASIC3-204ENST00000377904 CHIC1Q5VXU3 224 aa28.93■■■□□ 2.22
ASIC3-204ENST00000377904 TOP2AP11388 1531 aaKnown RBP28.73■■■□□ 2.19
ASIC3-204ENST00000377904 PEG3Q9GZU2 1588 aa28.69■■■□□ 2.18
ASIC3-204ENST00000377904 ATAD2BQ9ULI0 1458 aa28.51■■■□□ 2.15
ASIC3-204ENST00000377904 SMARCA2P51531 1590 aa28.48■■■□□ 2.15
ASIC3-204ENST00000377904 CCDC88BA6NC98 1476 aa28.46■■■□□ 2.15
ASIC3-204ENST00000377904 EIF4G1Q04637 1599 aaKnown RBP28.4■■■□□ 2.14
ASIC3-204ENST00000377904 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
ASIC3-204ENST00000377904 NCAPD3P42695 1498 aa28.23■■■□□ 2.11
ASIC3-204ENST00000377904 TRIM41Q8WV44 630 aa28.22■■■□□ 2.11
ASIC3-204ENST00000377904 HMGXB3Q12766 1538 aa28.19■■■□□ 2.1
ASIC3-204ENST00000377904 ABCC8Q09428 1581 aa27.92■■■□□ 2.06
ASIC3-204ENST00000377904 CC2D2AQ9P2K1 1620 aa27.9■■■□□ 2.06
ASIC3-204ENST00000377904 LOC105371045A0A1W2PR82 267 aa27.8■■■□□ 2.04
ASIC3-204ENST00000377904 WRNQ14191 1432 aaPredicted RBP eCLIP27.74■■■□□ 2.03
ASIC3-204ENST00000377904 FAM9AQ8IZU1 332 aaPredicted RBP27.69■■■□□ 2.02
ASIC3-204ENST00000377904 CFTRP13569 1480 aa27.68■■■□□ 2.02
ASIC3-204ENST00000377904 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
ASIC3-204ENST00000377904 CADPSQ9ULU8 1353 aa27.53■■■□□ 2
ASIC3-204ENST00000377904 EEA1Q15075 1411 aa27.5■■□□□ 1.99
ASIC3-204ENST00000377904 SOGA1O94964 1423 aa27.49■■□□□ 1.99
ASIC3-204ENST00000377904 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
ASIC3-204ENST00000377904 PRDM2Q13029 1718 aa27.45■■□□□ 1.98
ASIC3-204ENST00000377904 BIVM-ERCC5R4GMW8 1640 aa27.42■■□□□ 1.98
ASIC3-204ENST00000377904 RUSC2Q8N2Y8 1516 aa27.37■■□□□ 1.97
ASIC3-204ENST00000377904 CUX1P39880 1505 aa27.34■■□□□ 1.97
ASIC3-204ENST00000377904 CSRNP3Q8WYN3 585 aa27.32■■□□□ 1.96
ASIC3-204ENST00000377904 EHMT2Q96KQ7 1210 aa27.26■■□□□ 1.95
ASIC3-204ENST00000377904 FANCD2Q9BXW9 1451 aa27.2■■□□□ 1.94
ASIC3-204ENST00000377904 LAMC3Q9Y6N6 1575 aa27.19■■□□□ 1.94
ASIC3-204ENST00000377904 NESP48681 1621 aa27.16■■□□□ 1.94
ASIC3-204ENST00000377904 DNAJC5BQ9UF47 199 aa27.15■■□□□ 1.94
ASIC3-204ENST00000377904 GOLGA3Q08378 1498 aa27.12■■□□□ 1.93
ASIC3-204ENST00000377904 TNIKQ9UKE5 1360 aa27.11■■□□□ 1.93
ASIC3-204ENST00000377904 KIF21BO75037 1637 aa27.1■■□□□ 1.93
ASIC3-204ENST00000377904 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
ASIC3-204ENST00000377904 KIF27Q86VH2 1401 aa27.02■■□□□ 1.92
ASIC3-204ENST00000377904 DNMBPQ6XZF7 1577 aa26.99■■□□□ 1.91
ASIC3-204ENST00000377904 FGD5Q6ZNL6 1462 aa26.99■■□□□ 1.91
ASIC3-204ENST00000377904 PDS5BQ9NTI5 1447 aa26.98■■□□□ 1.91
ASIC3-204ENST00000377904 UBTFP17480 764 aaKnown RBP26.97■■□□□ 1.91
ASIC3-204ENST00000377904 CEP162Q5TB80 1403 aa26.96■■□□□ 1.91
ASIC3-204ENST00000377904 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
ASIC3-204ENST00000377904 PRXQ9BXM0 1461 aa26.92■■□□□ 1.9
ASIC3-204ENST00000377904 RAPGEF2Q9Y4G8 1499 aa26.91■■□□□ 1.9
ASIC3-204ENST00000377904 ERICH3Q5RHP9 1530 aa26.88■■□□□ 1.89
ASIC3-204ENST00000377904 CUX2O14529 1486 aa26.87■■□□□ 1.89
ASIC3-204ENST00000377904 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
ASIC3-204ENST00000377904 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
ASIC3-204ENST00000377904 PCGF6Q9BYE7 350 aa26.81■■□□□ 1.88
ASIC3-204ENST00000377904 KIF21AQ7Z4S6 1674 aa26.79■■□□□ 1.88
ASIC3-204ENST00000377904 ABCA10Q8WWZ4 1543 aa26.78■■□□□ 1.88
ASIC3-204ENST00000377904 IGF1RP08069 1367 aa26.77■■□□□ 1.88
ASIC3-204ENST00000377904 TRIM26Q12899 539 aaPredicted RBP26.77■■□□□ 1.88
ASIC3-204ENST00000377904 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
ASIC3-204ENST00000377904 CLIP1P30622 1438 aa26.69■■□□□ 1.86
ASIC3-204ENST00000377904 CARMIL1Q5VZK9 1371 aa26.63■■□□□ 1.85
ASIC3-204ENST00000377904 WDR97A6NE52 1622 aa26.62■■□□□ 1.85
ASIC3-204ENST00000377904 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
ASIC3-204ENST00000377904 ABCA5Q8WWZ7 1642 aa26.51■■□□□ 1.83
ASIC3-204ENST00000377904 VPS8Q8N3P4 1428 aa26.51■■□□□ 1.83
ASIC3-204ENST00000377904 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
ASIC3-204ENST00000377904 CUL7Q14999 1698 aa26.48■■□□□ 1.83
ASIC3-204ENST00000377904 WDR62O43379 1518 aa26.47■■□□□ 1.83
ASIC3-204ENST00000377904 TDRD9Q8NDG6 1382 aaKnown RBP26.46■■□□□ 1.83
ASIC3-204ENST00000377904 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.82
ASIC3-204ENST00000377904 PPARGC1BQ86YN6 1023 aaKnown RBP26.45■■□□□ 1.82
ASIC3-204ENST00000377904 RANGAP1P46060 587 aaPredicted RBP26.41■■□□□ 1.82
ASIC3-204ENST00000377904 ARAP1Q96P48 1450 aa26.4■■□□□ 1.82
ASIC3-204ENST00000377904 ERCC6Q03468 1493 aa26.39■■□□□ 1.81
ASIC3-204ENST00000377904 ARHGAP35Q9NRY4 1499 aa26.36■■□□□ 1.81
ASIC3-204ENST00000377904 IFT140Q96RY7 1462 aa26.34■■□□□ 1.81
ASIC3-204ENST00000377904 THOC2Q8NI27 1593 aaKnown RBP26.31■■□□□ 1.8
ASIC3-204ENST00000377904 HRCP23327 699 aa26.29■■□□□ 1.8
ASIC3-204ENST00000377904 AQRO60306 1485 aaKnown RBP eCLIP26.24■■□□□ 1.791e-6■■■■■ 30
ASIC3-204ENST00000377904 PBRM1Q86U86 1689 aa26.23■■□□□ 1.79
ASIC3-204ENST00000377904 APLP2Q06481 763 aa26.22■■□□□ 1.79
ASIC3-204ENST00000377904 GRIN2BQ13224 1484 aa26.21■■□□□ 1.79
ASIC3-204ENST00000377904 CTTNBP2Q8WZ74 1663 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms