RNA–Protein interactions for RNA: ENST00000375920.8

APOM-203, Transcript of apolipoprotein M, humanhuman

TSL 1 (best) BASIC

Gene APOM, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOM-203ENST00000375920 NISCHQ9Y2I1 1504 aa23.37■■□□□ 1.33
APOM-203ENST00000375920 CCDC180Q9P1Z9 1646 aa20.69■□□□□ 0.9
APOM-203ENST00000375920 ABCC9O60706 1549 aa20.16■□□□□ 0.82
APOM-203ENST00000375920 DCAF8L2P0C7V8 631 aa19.57■□□□□ 0.72
APOM-203ENST00000375920 NACADO15069 1562 aa19.53■□□□□ 0.72
APOM-203ENST00000375920 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
APOM-203ENST00000375920 MYO15BQ96JP2 1530 aa19.49■□□□□ 0.71
APOM-203ENST00000375920 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
APOM-203ENST00000375920 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
APOM-203ENST00000375920 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.627e-10■□□□□ 8.2
APOM-203ENST00000375920 UNC13AQ9UPW8 1703 aa18.84■□□□□ 0.61
APOM-203ENST00000375920 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
APOM-203ENST00000375920 SHROOM4Q9ULL8 1493 aa18.8■□□□□ 0.6
APOM-203ENST00000375920 BICRAQ9NZM4 1560 aa18.8■□□□□ 0.6
APOM-203ENST00000375920 DNAJC5BQ9UF47 199 aa18.44■□□□□ 0.54
APOM-203ENST00000375920 EIF4G1Q04637 1599 aaKnown RBP18.34■□□□□ 0.53
APOM-203ENST00000375920 CC2D2AQ9P2K1 1620 aa18.23■□□□□ 0.51
APOM-203ENST00000375920 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
APOM-203ENST00000375920 BAZ1AQ9NRL2 1556 aaPredicted RBP18.13■□□□□ 0.49
APOM-203ENST00000375920 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
APOM-203ENST00000375920 NCAPD3P42695 1498 aa18.04■□□□□ 0.48
APOM-203ENST00000375920 SMARCA2P51531 1590 aa18.02■□□□□ 0.48
APOM-203ENST00000375920 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
APOM-203ENST00000375920 MROH2BQ7Z745 1585 aa17.95■□□□□ 0.46
APOM-203ENST00000375920 PEG3Q9GZU2 1588 aa17.94■□□□□ 0.46
APOM-203ENST00000375920 HMGXB3Q12766 1538 aa17.89■□□□□ 0.45
APOM-203ENST00000375920 BAZ1BQ9UIG0 1483 aaKnown RBP17.86■□□□□ 0.45
APOM-203ENST00000375920 RSF1Q96T23 1441 aaPredicted RBP17.84■□□□□ 0.45
APOM-203ENST00000375920 WIZO95785 1651 aa17.71■□□□□ 0.42
APOM-203ENST00000375920 TOP2AP11388 1531 aaKnown RBP17.61■□□□□ 0.41
APOM-203ENST00000375920 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
APOM-203ENST00000375920 LAMC3Q9Y6N6 1575 aa17.5■□□□□ 0.39
APOM-203ENST00000375920 PDS5BQ9NTI5 1447 aa17.47■□□□□ 0.39
APOM-203ENST00000375920 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
APOM-203ENST00000375920 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
APOM-203ENST00000375920 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
APOM-203ENST00000375920 NESP48681 1621 aa17.43■□□□□ 0.38
APOM-203ENST00000375920 CFTRP13569 1480 aa17.4■□□□□ 0.38
APOM-203ENST00000375920 CUX2O14529 1486 aa17.26■□□□□ 0.35
APOM-203ENST00000375920 FANCD2Q9BXW9 1451 aa17.26■□□□□ 0.35
APOM-203ENST00000375920 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
APOM-203ENST00000375920 MRC2Q9UBG0 1479 aa17.19■□□□□ 0.34
APOM-203ENST00000375920 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
APOM-203ENST00000375920 THOC2Q8NI27 1593 aaKnown RBP17.13■□□□□ 0.33
APOM-203ENST00000375920 ABCC8Q09428 1581 aa17.12■□□□□ 0.33
APOM-203ENST00000375920 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
APOM-203ENST00000375920 WDR62O43379 1518 aa17.1■□□□□ 0.33
APOM-203ENST00000375920 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.32
APOM-203ENST00000375920 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
APOM-203ENST00000375920 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
APOM-203ENST00000375920 IFT140Q96RY7 1462 aa16.92■□□□□ 0.3
APOM-203ENST00000375920 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
APOM-203ENST00000375920 SOGA1O94964 1423 aa16.84■□□□□ 0.29
APOM-203ENST00000375920 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.28
APOM-203ENST00000375920 CUX1P39880 1505 aa16.83■□□□□ 0.28
APOM-203ENST00000375920 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
APOM-203ENST00000375920 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
APOM-203ENST00000375920 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
APOM-203ENST00000375920 RAD54L2Q9Y4B4 1467 aa16.73■□□□□ 0.27
APOM-203ENST00000375920 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
APOM-203ENST00000375920 ZNF608Q9ULD9 1512 aaPredicted RBP16.71■□□□□ 0.27
APOM-203ENST00000375920 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
APOM-203ENST00000375920 TDRD9Q8NDG6 1382 aaKnown RBP16.69■□□□□ 0.26
APOM-203ENST00000375920 ABCA10Q8WWZ4 1543 aa16.69■□□□□ 0.26
APOM-203ENST00000375920 AQRO60306 1485 aaKnown RBP eCLIP16.68■□□□□ 0.264e-7■■■■□ 21.3
APOM-203ENST00000375920 DNAJC5Q9H3Z4 198 aa16.68■□□□□ 0.26
APOM-203ENST00000375920 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
APOM-203ENST00000375920 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
APOM-203ENST00000375920 GRIN2BQ13224 1484 aa16.62■□□□□ 0.25
APOM-203ENST00000375920 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
APOM-203ENST00000375920 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
APOM-203ENST00000375920 TRIM41Q8WV44 630 aa16.59■□□□□ 0.25
APOM-203ENST00000375920 MAGI1Q96QZ7 1491 aaPredicted RBP16.57■□□□□ 0.24
APOM-203ENST00000375920 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
APOM-203ENST00000375920 KIF27Q86VH2 1401 aa16.54■□□□□ 0.24
APOM-203ENST00000375920 FBLN2P98095 1184 aa16.54■□□□□ 0.24
APOM-203ENST00000375920 ABCA5Q8WWZ7 1642 aa16.52■□□□□ 0.23
APOM-203ENST00000375920 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
APOM-203ENST00000375920 ERICH3Q5RHP9 1530 aa16.5■□□□□ 0.23
APOM-203ENST00000375920 SYNJ2O15056 1496 aa16.48■□□□□ 0.23
APOM-203ENST00000375920 FHAD1B1AJZ9 1412 aa16.46■□□□□ 0.23
APOM-203ENST00000375920 IGF1RP08069 1367 aa16.44■□□□□ 0.22
APOM-203ENST00000375920 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
APOM-203ENST00000375920 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
APOM-203ENST00000375920 GRIN2AQ12879 1464 aa16.36■□□□□ 0.21
APOM-203ENST00000375920 CARMIL1Q5VZK9 1371 aa16.36■□□□□ 0.21
APOM-203ENST00000375920 ADAMTS12P58397 1594 aa16.35■□□□□ 0.21
APOM-203ENST00000375920 CHD1O14646 1710 aa16.35■□□□□ 0.21
APOM-203ENST00000375920 EEA1Q15075 1411 aa16.32■□□□□ 0.2
APOM-203ENST00000375920 CUL7Q14999 1698 aa16.31■□□□□ 0.2
APOM-203ENST00000375920 NUP160Q12769 1436 aa16.31■□□□□ 0.2
APOM-203ENST00000375920 CSRNP3Q8WYN3 585 aa16.28■□□□□ 0.2
APOM-203ENST00000375920 CLASP1Q7Z460 1538 aa16.26■□□□□ 0.19
APOM-203ENST00000375920 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
APOM-203ENST00000375920 RAPGEF2Q9Y4G8 1499 aa16.24■□□□□ 0.19
APOM-203ENST00000375920 JPH4Q96JJ6 628 aa16.24■□□□□ 0.19
APOM-203ENST00000375920 ARHGEF11O15085 1522 aa16.21■□□□□ 0.19
APOM-203ENST00000375920 KIAA0586Q9BVV6 1533 aa16.21■□□□□ 0.19
APOM-203ENST00000375920 CEP170Q5SW79 1584 aa16.2■□□□□ 0.18
APOM-203ENST00000375920 PRXQ9BXM0 1461 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms