RNA–Protein interactions for RNA: ENST00000373547.8

PPP6C-201, Transcript of protein phosphatase 6 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP6C, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6C-201ENST00000373547 NISCHQ9Y2I1 1504 aa15.79■□□□□ 0.12
PPP6C-201ENST00000373547 DCAF8L2P0C7V8 631 aa14.53□□□□□ -0.08
PPP6C-201ENST00000373547 SHROOM4Q9ULL8 1493 aa13.74□□□□□ -0.21
PPP6C-201ENST00000373547 ABCC9O60706 1549 aa13.68□□□□□ -0.22
PPP6C-201ENST00000373547 CCDC180Q9P1Z9 1646 aa13.44□□□□□ -0.26
PPP6C-201ENST00000373547 SUPT5HO00267 1087 aaKnown RBP13.4□□□□□ -0.26
PPP6C-201ENST00000373547 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
PPP6C-201ENST00000373547 ZCCHC6Q5VYS8 1495 aaKnown RBP13.17□□□□□ -0.3
PPP6C-201ENST00000373547 SCRIBQ14160 1630 aa12.9□□□□□ -0.34
PPP6C-201ENST00000373547 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.34
PPP6C-201ENST00000373547 NACADO15069 1562 aa12.85□□□□□ -0.35
PPP6C-201ENST00000373547 DCAF1Q9Y4B6 1507 aa12.83□□□□□ -0.36
PPP6C-201ENST00000373547 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
PPP6C-201ENST00000373547 MYO15BQ96JP2 1530 aa12.57□□□□□ -0.4
PPP6C-201ENST00000373547 FAM9AQ8IZU1 332 aaPredicted RBP12.52□□□□□ -0.41
PPP6C-201ENST00000373547 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
PPP6C-201ENST00000373547 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
PPP6C-201ENST00000373547 CHIC1Q5VXU3 224 aa12.39□□□□□ -0.43
PPP6C-201ENST00000373547 RSF1Q96T23 1441 aaPredicted RBP12.35□□□□□ -0.43
PPP6C-201ENST00000373547 BAZ1AQ9NRL2 1556 aaPredicted RBP12.28□□□□□ -0.44
PPP6C-201ENST00000373547 RANGAP1P46060 587 aaPredicted RBP12.26□□□□□ -0.45
PPP6C-201ENST00000373547 MROH2BQ7Z745 1585 aa12.25□□□□□ -0.45
PPP6C-201ENST00000373547 BAZ1BQ9UIG0 1483 aaKnown RBP12.23□□□□□ -0.45
PPP6C-201ENST00000373547 UBTFP17480 764 aaKnown RBP12.16□□□□□ -0.46
PPP6C-201ENST00000373547 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
PPP6C-201ENST00000373547 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
PPP6C-201ENST00000373547 SMARCA2P51531 1590 aa12.08□□□□□ -0.48
PPP6C-201ENST00000373547 WIZO95785 1651 aa12.08□□□□□ -0.48
PPP6C-201ENST00000373547 SMARCA4P51532 1647 aa12.07□□□□□ -0.48
PPP6C-201ENST00000373547 EIF4G1Q04637 1599 aaKnown RBP12.06□□□□□ -0.48
PPP6C-201ENST00000373547 DNAJC5BQ9UF47 199 aa12.05□□□□□ -0.48
PPP6C-201ENST00000373547 LOC105371045A0A1W2PR82 267 aa12.03□□□□□ -0.48
PPP6C-201ENST00000373547 ATP1B4Q9UN42 357 aaPredicted RBP12.02□□□□□ -0.48
PPP6C-201ENST00000373547 UNC13AQ9UPW8 1703 aa12.02□□□□□ -0.48
PPP6C-201ENST00000373547 TTBK1Q5TCY1 1321 aaPredicted RBP12.01□□□□□ -0.49
PPP6C-201ENST00000373547 FBLN2P98095 1184 aa12.01□□□□□ -0.49
PPP6C-201ENST00000373547 APLP2Q06481 763 aa12□□□□□ -0.49
PPP6C-201ENST00000373547 CCDC88BA6NC98 1476 aa11.99□□□□□ -0.49
PPP6C-201ENST00000373547 ERCC6Q03468 1493 aa11.95□□□□□ -0.5
PPP6C-201ENST00000373547 CC2D2AQ9P2K1 1620 aa11.93□□□□□ -0.5
PPP6C-201ENST00000373547 TOP2AP11388 1531 aaKnown RBP11.93□□□□□ -0.5
PPP6C-201ENST00000373547 NCAPD3P42695 1498 aa11.92□□□□□ -0.5
PPP6C-201ENST00000373547 CADPSQ9ULU8 1353 aa11.89□□□□□ -0.51
PPP6C-201ENST00000373547 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
PPP6C-201ENST00000373547 PCGF6Q9BYE7 350 aa11.86□□□□□ -0.51
PPP6C-201ENST00000373547 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
PPP6C-201ENST00000373547 PDS5BQ9NTI5 1447 aa11.84□□□□□ -0.51
PPP6C-201ENST00000373547 PPARGC1BQ86YN6 1023 aaKnown RBP11.83□□□□□ -0.52
PPP6C-201ENST00000373547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
PPP6C-201ENST00000373547 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
PPP6C-201ENST00000373547 P3H3Q8IVL6 736 aa11.76□□□□□ -0.53
PPP6C-201ENST00000373547 ABCC8Q09428 1581 aa11.76□□□□□ -0.53
PPP6C-201ENST00000373547 NESP48681 1621 aa11.75□□□□□ -0.53
PPP6C-201ENST00000373547 CHMP7Q8WUX9 453 aaPredicted RBP11.75□□□□□ -0.53
PPP6C-201ENST00000373547 HMGXB3Q12766 1538 aa11.73□□□□□ -0.53
PPP6C-201ENST00000373547 FANCD2Q9BXW9 1451 aa11.73□□□□□ -0.53
PPP6C-201ENST00000373547 TRIM26Q12899 539 aaPredicted RBP11.71□□□□□ -0.54
PPP6C-201ENST00000373547 CEP164Q9UPV0 1460 aa11.71□□□□□ -0.54
PPP6C-201ENST00000373547 HRCP23327 699 aa11.69□□□□□ -0.54
PPP6C-201ENST00000373547 PEG3Q9GZU2 1588 aa11.69□□□□□ -0.54
PPP6C-201ENST00000373547 TDRD9Q8NDG6 1382 aaKnown RBP11.68□□□□□ -0.54
PPP6C-201ENST00000373547 ARID3CA6NKF2 412 aa11.67□□□□□ -0.54
PPP6C-201ENST00000373547 SOGA1O94964 1423 aa11.66□□□□□ -0.54
PPP6C-201ENST00000373547 KIF27Q86VH2 1401 aa11.66□□□□□ -0.54
PPP6C-201ENST00000373547 CUX2O14529 1486 aa11.65□□□□□ -0.54
PPP6C-201ENST00000373547 CFTRP13569 1480 aa11.64□□□□□ -0.55
PPP6C-201ENST00000373547 EEA1Q15075 1411 aa11.59□□□□□ -0.55
PPP6C-201ENST00000373547 ITGAEP38570 1179 aa11.56□□□□□ -0.56
PPP6C-201ENST00000373547 CARMIL1Q5VZK9 1371 aa11.55□□□□□ -0.56
PPP6C-201ENST00000373547 RAD54L2Q9Y4B4 1467 aa11.53□□□□□ -0.56
PPP6C-201ENST00000373547 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
PPP6C-201ENST00000373547 FGD5Q6ZNL6 1462 aa11.52□□□□□ -0.56
PPP6C-201ENST00000373547 LAMC3Q9Y6N6 1575 aa11.49□□□□□ -0.57
PPP6C-201ENST00000373547 RUSC2Q8N2Y8 1516 aa11.49□□□□□ -0.57
PPP6C-201ENST00000373547 GOLGA3Q08378 1498 aa11.48□□□□□ -0.57
PPP6C-201ENST00000373547 MRC2Q9UBG0 1479 aa11.48□□□□□ -0.57
PPP6C-201ENST00000373547 CEP162Q5TB80 1403 aa11.47□□□□□ -0.57
PPP6C-201ENST00000373547 TNIKQ9UKE5 1360 aa11.47□□□□□ -0.57
PPP6C-201ENST00000373547 SYNJ1O43426 1573 aa11.47□□□□□ -0.57
PPP6C-201ENST00000373547 AQRO60306 1485 aaKnown RBP eCLIP11.46□□□□□ -0.57
PPP6C-201ENST00000373547 NPM1P06748 294 aaKnown RBP eCLIP11.45□□□□□ -0.58
PPP6C-201ENST00000373547 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
PPP6C-201ENST00000373547 ZEB1P37275 1124 aaPredicted RBP11.45□□□□□ -0.58
PPP6C-201ENST00000373547 CLIP1P30622 1438 aa11.44□□□□□ -0.58
PPP6C-201ENST00000373547 FAM50AQ14320 339 aaKnown RBP11.43□□□□□ -0.58
PPP6C-201ENST00000373547 CUX1P39880 1505 aa11.42□□□□□ -0.58
PPP6C-201ENST00000373547 GAPVD1Q14C86 1478 aa11.41□□□□□ -0.58
PPP6C-201ENST00000373547 POLA1P09884 1462 aaPredicted RBP11.41□□□□□ -0.58
PPP6C-201ENST00000373547 CDK11AQ9UQ88 783 aaPredicted RBP11.4□□□□□ -0.58
PPP6C-201ENST00000373547 IGF1RP08069 1367 aa11.39□□□□□ -0.59
PPP6C-201ENST00000373547 TOP2BQ02880 1626 aa11.38□□□□□ -0.59
PPP6C-201ENST00000373547 ZNF777Q9ULD5 760 aaPredicted RBP11.37□□□□□ -0.59
PPP6C-201ENST00000373547 URB2Q14146 1524 aaKnown RBP11.36□□□□□ -0.59
PPP6C-201ENST00000373547 KIF21BO75037 1637 aa11.35□□□□□ -0.59
PPP6C-201ENST00000373547 CCER1Q8TC90 406 aaPredicted RBP11.35□□□□□ -0.59
PPP6C-201ENST00000373547 DNMBPQ6XZF7 1577 aa11.35□□□□□ -0.59
PPP6C-201ENST00000373547 OSCARQ8IYS5 282 aa11.35□□□□□ -0.59
PPP6C-201ENST00000373547 JPH4Q96JJ6 628 aa11.35□□□□□ -0.59
PPP6C-201ENST00000373547 KCNH8Q96L42 1107 aa11.35□□□□□ -0.59
PPP6C-201ENST00000373547 RAPGEF2Q9Y4G8 1499 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms