RNA–Protein interactions for RNA: ENST00000373539.3

PHKA1-202, Transcript of phosphorylase kinase regulatory subunit alpha 1, humanhuman

TSL 5 BASIC

Gene PHKA1, Length 4,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1-202ENST00000373539 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.44
PHKA1-202ENST00000373539 NISCHQ9Y2I1 1504 aa28.96■■■□□ 2.23
PHKA1-202ENST00000373539 SUPT5HO00267 1087 aaKnown RBP28.36■■■□□ 2.13
PHKA1-202ENST00000373539 SHROOM4Q9ULL8 1493 aa28.2■■■□□ 2.1
PHKA1-202ENST00000373539 EHMT2Q96KQ7 1210 aa27.61■■■□□ 2.01
PHKA1-202ENST00000373539 FAM9AQ8IZU1 332 aaPredicted RBP26.81■■□□□ 1.88
PHKA1-202ENST00000373539 TTBK1Q5TCY1 1321 aaPredicted RBP26.47■■□□□ 1.83
PHKA1-202ENST00000373539 RANGAP1P46060 587 aaPredicted RBP26.39■■□□□ 1.82
PHKA1-202ENST00000373539 APLP2Q06481 763 aa26.06■■□□□ 1.76
PHKA1-202ENST00000373539 TRIM41Q8WV44 630 aa26.01■■□□□ 1.75
PHKA1-202ENST00000373539 ATP1B4Q9UN42 357 aaPredicted RBP25.86■■□□□ 1.73
PHKA1-202ENST00000373539 PCGF6Q9BYE7 350 aa25.84■■□□□ 1.73
PHKA1-202ENST00000373539 UBTFP17480 764 aaKnown RBP25.71■■□□□ 1.71
PHKA1-202ENST00000373539 PPARGC1BQ86YN6 1023 aaKnown RBP25.65■■□□□ 1.7
PHKA1-202ENST00000373539 ABCC9O60706 1549 aa25.57■■□□□ 1.68
PHKA1-202ENST00000373539 PABPN1Q86U42 306 aaKnown RBP eCLIP25.56■■□□□ 1.68
PHKA1-202ENST00000373539 LOC105371045A0A1W2PR82 267 aa25.29■■□□□ 1.64
PHKA1-202ENST00000373539 CCER1Q8TC90 406 aaPredicted RBP25.17■■□□□ 1.62
PHKA1-202ENST00000373539 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.6
PHKA1-202ENST00000373539 ITGAEP38570 1179 aa25.01■■□□□ 1.59
PHKA1-202ENST00000373539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25■■□□□ 1.59
PHKA1-202ENST00000373539 HNRNPUL2Q1KMD3 747 aaKnown RBP25■■□□□ 1.59
PHKA1-202ENST00000373539 MYT1LQ9UL68 1186 aa24.75■■□□□ 1.55
PHKA1-202ENST00000373539 YTHDC1Q96MU7 727 aaKnown RBP24.51■■□□□ 1.51
PHKA1-202ENST00000373539 FBLN2P98095 1184 aa24.51■■□□□ 1.51
PHKA1-202ENST00000373539 TRIM26Q12899 539 aaPredicted RBP24.5■■□□□ 1.51
PHKA1-202ENST00000373539 CNGB1Q14028 1251 aaPredicted RBP24.48■■□□□ 1.51
PHKA1-202ENST00000373539 ZEB1P37275 1124 aaPredicted RBP24.45■■□□□ 1.5
PHKA1-202ENST00000373539 POLR3GLQ9BT43 218 aa24.42■■□□□ 1.5
PHKA1-202ENST00000373539 ARID3CA6NKF2 412 aa24.32■■□□□ 1.48
PHKA1-202ENST00000373539 PELP1Q8IZL8 1130 aaKnown RBP24.31■■□□□ 1.48
PHKA1-202ENST00000373539 P3H3Q8IVL6 736 aa24.27■■□□□ 1.48
PHKA1-202ENST00000373539 FAM50AQ14320 339 aaKnown RBP24.22■■□□□ 1.47
PHKA1-202ENST00000373539 CENPBP07199 599 aaPredicted RBP24.17■■□□□ 1.46
PHKA1-202ENST00000373539 SCRIBQ14160 1630 aa24.13■■□□□ 1.45
PHKA1-202ENST00000373539 HRCP23327 699 aa24.12■■□□□ 1.45
PHKA1-202ENST00000373539 TRIM52Q96A61 297 aa23.97■■□□□ 1.43
PHKA1-202ENST00000373539 CSRNP3Q8WYN3 585 aa23.95■■□□□ 1.42
PHKA1-202ENST00000373539 NEUROD1Q13562 356 aa23.93■■□□□ 1.42
PHKA1-202ENST00000373539 SLC4A1APQ9BWU0 796 aaKnown RBP23.9■■□□□ 1.42
PHKA1-202ENST00000373539 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
PHKA1-202ENST00000373539 ZNF326Q5BKZ1 582 aaKnown RBP23.81■■□□□ 1.4
PHKA1-202ENST00000373539 NEFLP07196 543 aa23.79■■□□□ 1.4
PHKA1-202ENST00000373539 ZNF777Q9ULD5 760 aaPredicted RBP23.75■■□□□ 1.39
PHKA1-202ENST00000373539 ERICH6Q7L0X2 663 aa23.55■■□□□ 1.36
PHKA1-202ENST00000373539 PLPPR3Q6T4P5 718 aa23.54■■□□□ 1.36
PHKA1-202ENST00000373539 DIEXFQ68CQ4 756 aaKnown RBP23.52■■□□□ 1.36
PHKA1-202ENST00000373539 CHIC2Q9UKJ5 165 aa23.38■■□□□ 1.33
PHKA1-202ENST00000373539 BCANQ96GW7 911 aa23.37■■□□□ 1.33
PHKA1-202ENST00000373539 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
PHKA1-202ENST00000373539 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.33
PHKA1-202ENST00000373539 CCDC180Q9P1Z9 1646 aa23.32■■□□□ 1.32
PHKA1-202ENST00000373539 RSF1Q96T23 1441 aaPredicted RBP23.32■■□□□ 1.32
PHKA1-202ENST00000373539 CDK11AQ9UQ88 783 aaPredicted RBP23.3■■□□□ 1.32
PHKA1-202ENST00000373539 CHGAP10645 457 aaKnown RBP23.25■■□□□ 1.31
PHKA1-202ENST00000373539 RB1CC1Q8TDY2 1594 aa23.25■■□□□ 1.31
PHKA1-202ENST00000373539 SENP3Q9H4L4 574 aaPredicted RBP23.24■■□□□ 1.31
PHKA1-202ENST00000373539 NPM1P06748 294 aaKnown RBP eCLIP23.23■■□□□ 1.31
PHKA1-202ENST00000373539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.21■■□□□ 1.31
PHKA1-202ENST00000373539 CECR2Q9BXF3 1484 aa23.18■■□□□ 1.3
PHKA1-202ENST00000373539 KCNH8Q96L42 1107 aa23.17■■□□□ 1.3
PHKA1-202ENST00000373539 BCL11AQ9H165 835 aa23.1■■□□□ 1.29
PHKA1-202ENST00000373539 ESF1Q9H501 851 aaKnown RBP23.08■■□□□ 1.29
PHKA1-202ENST00000373539 SLC24A1O60721 1099 aa23.06■■□□□ 1.28
PHKA1-202ENST00000373539 ANP32CO43423 234 aa23.04■■□□□ 1.28
PHKA1-202ENST00000373539 ZNF316A6NFI3 1004 aaPredicted RBP23.03■■□□□ 1.28
PHKA1-202ENST00000373539 STAG3Q9UJ98 1225 aa23.02■■□□□ 1.27
PHKA1-202ENST00000373539 BAZ1BQ9UIG0 1483 aaKnown RBP23.02■■□□□ 1.27
PHKA1-202ENST00000373539 HIRIP3Q9BW71 556 aaPredicted RBP23.01■■□□□ 1.27
PHKA1-202ENST00000373539 MTUS2Q5JR59 1369 aa22.98■■□□□ 1.27
PHKA1-202ENST00000373539 RRP7BPQ9NSQ0 103 aa22.98■■□□□ 1.27
PHKA1-202ENST00000373539 NACADO15069 1562 aa22.97■■□□□ 1.27
PHKA1-202ENST00000373539 KDM2AQ9Y2K7 1162 aa22.97■■□□□ 1.27
PHKA1-202ENST00000373539 CLSPNQ9HAW4 1339 aa22.95■■□□□ 1.26
PHKA1-202ENST00000373539 TSPY4P0CV99 314 aa22.94■■□□□ 1.26
PHKA1-202ENST00000373539 TSPY10P0CW01 314 aa22.94■■□□□ 1.26
PHKA1-202ENST00000373539 CLIP1P30622 1438 aa22.94■■□□□ 1.26
PHKA1-202ENST00000373539 WRNQ14191 1432 aaPredicted RBP eCLIP22.93■■□□□ 1.26
PHKA1-202ENST00000373539 DAXXQ9UER7 740 aaPredicted RBP22.89■■□□□ 1.25
PHKA1-202ENST00000373539 DDX10Q13206 875 aaKnown RBP22.89■■□□□ 1.25
PHKA1-202ENST00000373539 TONSLQ96HA7 1378 aa22.86■■□□□ 1.25
PHKA1-202ENST00000373539 SALL2Q9Y467 1007 aaPredicted RBP22.85■■□□□ 1.25
PHKA1-202ENST00000373539 DCAF1Q9Y4B6 1507 aa22.84■■□□□ 1.25
PHKA1-202ENST00000373539 PLEKHG5O94827 1062 aa22.82■■□□□ 1.24
PHKA1-202ENST00000373539 GTF3C3Q9Y5Q9 886 aa22.8■■□□□ 1.24
PHKA1-202ENST00000373539 PLEKHD1A6NEE1 506 aa22.8■■□□□ 1.24
PHKA1-202ENST00000373539 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
PHKA1-202ENST00000373539 RGL3Q3MIN7 710 aa22.76■■□□□ 1.23
PHKA1-202ENST00000373539 CEP162Q5TB80 1403 aa22.72■■□□□ 1.23
PHKA1-202ENST00000373539 SENP3-EIF4A1A0A087X0R7 540 aa22.71■■□□□ 1.23
PHKA1-202ENST00000373539 FAM9BQ8IZU0 186 aa22.68■■□□□ 1.22
PHKA1-202ENST00000373539 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
PHKA1-202ENST00000373539 SOGA1O94964 1423 aa22.67■■□□□ 1.22
PHKA1-202ENST00000373539 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
PHKA1-202ENST00000373539 CFDP1Q9UEE9 299 aaPredicted RBP22.67■■□□□ 1.22
PHKA1-202ENST00000373539 BAZ1AQ9NRL2 1556 aaPredicted RBP22.65■■□□□ 1.22
PHKA1-202ENST00000373539 CANXP27824 592 aaKnown RBP22.61■■□□□ 1.21
PHKA1-202ENST00000373539 TDRD9Q8NDG6 1382 aaKnown RBP22.6■■□□□ 1.21
PHKA1-202ENST00000373539 NEFMP07197 916 aa22.6■■□□□ 1.21
PHKA1-202ENST00000373539 ARID4BQ4LE39 1312 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms