RNA–Protein interactions for RNA: ENST00000373362.3

GJB3-201, Transcript of gap junction protein beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB3-201ENST00000373362 NISCHQ9Y2I1 1504 aa37.46■■■■□ 3.59
GJB3-201ENST00000373362 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
GJB3-201ENST00000373362 ABCC9O60706 1549 aa31.41■■■□□ 2.62
GJB3-201ENST00000373362 ZCCHC6Q5VYS8 1495 aaKnown RBP31.39■■■□□ 2.62
GJB3-201ENST00000373362 DCAF1Q9Y4B6 1507 aa31.02■■■□□ 2.56
GJB3-201ENST00000373362 DCAF8L2P0C7V8 631 aa30.96■■■□□ 2.55
GJB3-201ENST00000373362 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
GJB3-201ENST00000373362 NACADO15069 1562 aa30.73■■■□□ 2.51
GJB3-201ENST00000373362 RB1CC1Q8TDY2 1594 aa30.56■■■□□ 2.48
GJB3-201ENST00000373362 SHROOM4Q9ULL8 1493 aa30.37■■■□□ 2.45
GJB3-201ENST00000373362 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
GJB3-201ENST00000373362 UNC13AQ9UPW8 1703 aa29.93■■■□□ 2.38
GJB3-201ENST00000373362 SUPT5HO00267 1087 aaKnown RBP29.66■■■□□ 2.34
GJB3-201ENST00000373362 BICRAQ9NZM4 1560 aa29.64■■■□□ 2.34
GJB3-201ENST00000373362 PABPN1Q86U42 306 aaKnown RBP eCLIP29.5■■■□□ 2.31
GJB3-201ENST00000373362 CECR2Q9BXF3 1484 aa29.11■■■□□ 2.25
GJB3-201ENST00000373362 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
GJB3-201ENST00000373362 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
GJB3-201ENST00000373362 SMARCA4P51532 1647 aa28.89■■■□□ 2.22
GJB3-201ENST00000373362 CHIC1Q5VXU3 224 aa28.88■■■□□ 2.21
GJB3-201ENST00000373362 RSF1Q96T23 1441 aaPredicted RBP28.88■■■□□ 2.21
GJB3-201ENST00000373362 EIF4G1Q04637 1599 aaKnown RBP28.78■■■□□ 2.2
GJB3-201ENST00000373362 WIZO95785 1651 aa28.65■■■□□ 2.18
GJB3-201ENST00000373362 PEG3Q9GZU2 1588 aa28.59■■■□□ 2.17
GJB3-201ENST00000373362 ATAD2BQ9ULI0 1458 aa28.51■■■□□ 2.15
GJB3-201ENST00000373362 SMARCA2P51531 1590 aa28.5■■■□□ 2.15
GJB3-201ENST00000373362 CC2D2AQ9P2K1 1620 aa28.45■■■□□ 2.14
GJB3-201ENST00000373362 TOP2AP11388 1531 aaKnown RBP28.36■■■□□ 2.13
GJB3-201ENST00000373362 NCAPD3P42695 1498 aa28.36■■■□□ 2.13
GJB3-201ENST00000373362 BAZ1BQ9UIG0 1483 aaKnown RBP28.32■■■□□ 2.12
GJB3-201ENST00000373362 HMGXB3Q12766 1538 aa28.29■■■□□ 2.12
GJB3-201ENST00000373362 DNAJC5BQ9UF47 199 aa28.07■■■□□ 2.08
GJB3-201ENST00000373362 CCDC88BA6NC98 1476 aa28.05■■■□□ 2.08
GJB3-201ENST00000373362 TRIM41Q8WV44 630 aa27.94■■■□□ 2.06
GJB3-201ENST00000373362 LOC105371045A0A1W2PR82 267 aa27.69■■■□□ 2.02
GJB3-201ENST00000373362 CFTRP13569 1480 aa27.61■■■□□ 2.01
GJB3-201ENST00000373362 CADPSQ9ULU8 1353 aa27.58■■■□□ 2
GJB3-201ENST00000373362 LAMC3Q9Y6N6 1575 aa27.48■■□□□ 1.99
GJB3-201ENST00000373362 PRDM2Q13029 1718 aa27.47■■□□□ 1.99
GJB3-201ENST00000373362 NESP48681 1621 aa27.45■■□□□ 1.98
GJB3-201ENST00000373362 PCGF6Q9BYE7 350 aa27.33■■□□□ 1.97
GJB3-201ENST00000373362 EEA1Q15075 1411 aa27.3■■□□□ 1.96
GJB3-201ENST00000373362 ABCC8Q09428 1581 aa27.3■■□□□ 1.96
GJB3-201ENST00000373362 FAM9AQ8IZU1 332 aaPredicted RBP27.29■■□□□ 1.96
GJB3-201ENST00000373362 HRCP23327 699 aa27.28■■□□□ 1.96
GJB3-201ENST00000373362 TRIM26Q12899 539 aaPredicted RBP27.27■■□□□ 1.96
GJB3-201ENST00000373362 FANCD2Q9BXW9 1451 aa27.26■■□□□ 1.96
GJB3-201ENST00000373362 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
GJB3-201ENST00000373362 WRNQ14191 1432 aaPredicted RBP eCLIP27.19■■□□□ 1.94
GJB3-201ENST00000373362 KIF21AQ7Z4S6 1674 aa27.15■■□□□ 1.94
GJB3-201ENST00000373362 CEP164Q9UPV0 1460 aa27.14■■□□□ 1.94
GJB3-201ENST00000373362 SYNJ1O43426 1573 aa27.11■■□□□ 1.93
GJB3-201ENST00000373362 CUX1P39880 1505 aa27.06■■□□□ 1.92
GJB3-201ENST00000373362 TOP2BQ02880 1626 aa27.05■■□□□ 1.92
GJB3-201ENST00000373362 BIVM-ERCC5R4GMW8 1640 aa27.04■■□□□ 1.92
GJB3-201ENST00000373362 ERCC6Q03468 1493 aa26.97■■□□□ 1.91
GJB3-201ENST00000373362 DNMBPQ6XZF7 1577 aa26.97■■□□□ 1.91
GJB3-201ENST00000373362 SOGA1O94964 1423 aa26.95■■□□□ 1.91
GJB3-201ENST00000373362 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.91
GJB3-201ENST00000373362 TNIKQ9UKE5 1360 aa26.94■■□□□ 1.9
GJB3-201ENST00000373362 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
GJB3-201ENST00000373362 MRC2Q9UBG0 1479 aa26.92■■□□□ 1.9
GJB3-201ENST00000373362 CSRNP3Q8WYN3 585 aa26.92■■□□□ 1.9
GJB3-201ENST00000373362 GOLGA3Q08378 1498 aa26.86■■□□□ 1.89
GJB3-201ENST00000373362 THOC2Q8NI27 1593 aaKnown RBP26.83■■□□□ 1.89
GJB3-201ENST00000373362 FGD5Q6ZNL6 1462 aa26.83■■□□□ 1.89
GJB3-201ENST00000373362 KIF21BO75037 1637 aa26.82■■□□□ 1.88
GJB3-201ENST00000373362 WDR62O43379 1518 aa26.81■■□□□ 1.88
GJB3-201ENST00000373362 CEP162Q5TB80 1403 aa26.79■■□□□ 1.88
GJB3-201ENST00000373362 POLA1P09884 1462 aaPredicted RBP26.77■■□□□ 1.88
GJB3-201ENST00000373362 EHMT2Q96KQ7 1210 aa26.76■■□□□ 1.87
GJB3-201ENST00000373362 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
GJB3-201ENST00000373362 ZEB1P37275 1124 aaPredicted RBP26.71■■□□□ 1.87
GJB3-201ENST00000373362 RAD54L2Q9Y4B4 1467 aa26.65■■□□□ 1.86
GJB3-201ENST00000373362 CUX2O14529 1486 aa26.62■■□□□ 1.85
GJB3-201ENST00000373362 UBTFP17480 764 aaKnown RBP26.61■■□□□ 1.85
GJB3-201ENST00000373362 ABCA10Q8WWZ4 1543 aa26.6■■□□□ 1.85
GJB3-201ENST00000373362 TARBP1Q13395 1621 aaKnown RBP26.59■■□□□ 1.85
GJB3-201ENST00000373362 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
GJB3-201ENST00000373362 KIF27Q86VH2 1401 aa26.54■■□□□ 1.84
GJB3-201ENST00000373362 IFT140Q96RY7 1462 aa26.53■■□□□ 1.84
GJB3-201ENST00000373362 ERICH3Q5RHP9 1530 aa26.53■■□□□ 1.84
GJB3-201ENST00000373362 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
GJB3-201ENST00000373362 PRXQ9BXM0 1461 aa26.42■■□□□ 1.82
GJB3-201ENST00000373362 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
GJB3-201ENST00000373362 CLIP1P30622 1438 aa26.41■■□□□ 1.82
GJB3-201ENST00000373362 RAPGEF2Q9Y4G8 1499 aa26.41■■□□□ 1.82
GJB3-201ENST00000373362 ZNF608Q9ULD9 1512 aaPredicted RBP26.38■■□□□ 1.81
GJB3-201ENST00000373362 GAPVD1Q14C86 1478 aa26.37■■□□□ 1.81
GJB3-201ENST00000373362 IGF1RP08069 1367 aa26.35■■□□□ 1.81
GJB3-201ENST00000373362 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
GJB3-201ENST00000373362 AQRO60306 1485 aaKnown RBP eCLIP26.33■■□□□ 1.81
GJB3-201ENST00000373362 EIF4G3O43432 1585 aaKnown RBP26.31■■□□□ 1.8
GJB3-201ENST00000373362 PPARGC1BQ86YN6 1023 aaKnown RBP26.3■■□□□ 1.8
GJB3-201ENST00000373362 PBRM1Q86U86 1689 aa26.27■■□□□ 1.8
GJB3-201ENST00000373362 GRIN2BQ13224 1484 aa26.23■■□□□ 1.79
GJB3-201ENST00000373362 CUL7Q14999 1698 aa26.22■■□□□ 1.79
GJB3-201ENST00000373362 CARMIL1Q5VZK9 1371 aa26.2■■□□□ 1.79
GJB3-201ENST00000373362 ADAMTS12P58397 1594 aa26.11■■□□□ 1.77
GJB3-201ENST00000373362 APLP2Q06481 763 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms