RNA–Protein interactions for RNA: ENST00000373237.3

PSMB2-201, Transcript of proteasome subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB2, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB2-201ENST00000373237 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
PSMB2-201ENST00000373237 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
PSMB2-201ENST00000373237 ZCCHC6Q5VYS8 1495 aaKnown RBP21.41■■□□□ 1.02
PSMB2-201ENST00000373237 DCAF8L2P0C7V8 631 aa21.2■□□□□ 0.98
PSMB2-201ENST00000373237 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
PSMB2-201ENST00000373237 DCAF1Q9Y4B6 1507 aa20.95■□□□□ 0.94
PSMB2-201ENST00000373237 ABCC9O60706 1549 aa20.86■□□□□ 0.93
PSMB2-201ENST00000373237 MYO15BQ96JP2 1530 aa20.6■□□□□ 0.89
PSMB2-201ENST00000373237 NACADO15069 1562 aa20.51■□□□□ 0.87
PSMB2-201ENST00000373237 SCRIBQ14160 1630 aa20.47■□□□□ 0.87
PSMB2-201ENST00000373237 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.85
PSMB2-201ENST00000373237 RB1CC1Q8TDY2 1594 aa20.33■□□□□ 0.84
PSMB2-201ENST00000373237 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
PSMB2-201ENST00000373237 RSF1Q96T23 1441 aaPredicted RBP19.85■□□□□ 0.77
PSMB2-201ENST00000373237 CECR2Q9BXF3 1484 aa19.84■□□□□ 0.77
PSMB2-201ENST00000373237 PABPN1Q86U42 306 aaKnown RBP eCLIP19.75■□□□□ 0.75
PSMB2-201ENST00000373237 BICRAQ9NZM4 1560 aa19.73■□□□□ 0.75
PSMB2-201ENST00000373237 MROH2BQ7Z745 1585 aa19.73■□□□□ 0.75
PSMB2-201ENST00000373237 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.73
PSMB2-201ENST00000373237 WIZO95785 1651 aa19.62■□□□□ 0.73
PSMB2-201ENST00000373237 SMARCA4P51532 1647 aa19.56■□□□□ 0.72
PSMB2-201ENST00000373237 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
PSMB2-201ENST00000373237 TOP2AP11388 1531 aaKnown RBP19.33■□□□□ 0.68
PSMB2-201ENST00000373237 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
PSMB2-201ENST00000373237 SMARCA2P51531 1590 aa19.18■□□□□ 0.66
PSMB2-201ENST00000373237 CCDC88BA6NC98 1476 aa19.18■□□□□ 0.66
PSMB2-201ENST00000373237 ATAD2BQ9ULI0 1458 aa19.17■□□□□ 0.66
PSMB2-201ENST00000373237 EIF4G1Q04637 1599 aaKnown RBP19.14■□□□□ 0.65
PSMB2-201ENST00000373237 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
PSMB2-201ENST00000373237 TRIM41Q8WV44 630 aa19.09■□□□□ 0.65
PSMB2-201ENST00000373237 NCAPD3P42695 1498 aa18.93■□□□□ 0.62
PSMB2-201ENST00000373237 HMGXB3Q12766 1538 aa18.92■□□□□ 0.62
PSMB2-201ENST00000373237 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
PSMB2-201ENST00000373237 LOC105371045A0A1W2PR82 267 aa18.87■□□□□ 0.61
PSMB2-201ENST00000373237 FAM9AQ8IZU1 332 aaPredicted RBP18.85■□□□□ 0.61
PSMB2-201ENST00000373237 CC2D2AQ9P2K1 1620 aa18.84■□□□□ 0.61
PSMB2-201ENST00000373237 WRNQ14191 1432 aaPredicted RBP eCLIP18.69■□□□□ 0.58
PSMB2-201ENST00000373237 EHMT2Q96KQ7 1210 aa18.68■□□□□ 0.58
PSMB2-201ENST00000373237 SYNJ1O43426 1573 aa18.63■□□□□ 0.57
PSMB2-201ENST00000373237 CFTRP13569 1480 aa18.59■□□□□ 0.57
PSMB2-201ENST00000373237 SOGA1O94964 1423 aa18.57■□□□□ 0.56
PSMB2-201ENST00000373237 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
PSMB2-201ENST00000373237 CADPSQ9ULU8 1353 aa18.5■□□□□ 0.55
PSMB2-201ENST00000373237 RUSC2Q8N2Y8 1516 aa18.5■□□□□ 0.55
PSMB2-201ENST00000373237 TOP2BQ02880 1626 aa18.49■□□□□ 0.55
PSMB2-201ENST00000373237 BIVM-ERCC5R4GMW8 1640 aa18.46■□□□□ 0.55
PSMB2-201ENST00000373237 EEA1Q15075 1411 aa18.44■□□□□ 0.54
PSMB2-201ENST00000373237 CUX1P39880 1505 aa18.42■□□□□ 0.54
PSMB2-201ENST00000373237 CSRNP3Q8WYN3 585 aa18.42■□□□□ 0.54
PSMB2-201ENST00000373237 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
PSMB2-201ENST00000373237 NESP48681 1621 aa18.38■□□□□ 0.53
PSMB2-201ENST00000373237 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.53
PSMB2-201ENST00000373237 UBTFP17480 764 aaKnown RBP18.28■□□□□ 0.52
PSMB2-201ENST00000373237 LAMC3Q9Y6N6 1575 aa18.28■□□□□ 0.52
PSMB2-201ENST00000373237 GOLGA3Q08378 1498 aa18.26■□□□□ 0.51
PSMB2-201ENST00000373237 CEP164Q9UPV0 1460 aa18.24■□□□□ 0.51
PSMB2-201ENST00000373237 KIF21BO75037 1637 aa18.23■□□□□ 0.51
PSMB2-201ENST00000373237 TNIKQ9UKE5 1360 aa18.22■□□□□ 0.51
PSMB2-201ENST00000373237 PCGF6Q9BYE7 350 aa18.22■□□□□ 0.51
PSMB2-201ENST00000373237 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
PSMB2-201ENST00000373237 CEP162Q5TB80 1403 aa18.19■□□□□ 0.5
PSMB2-201ENST00000373237 KIF27Q86VH2 1401 aa18.19■□□□□ 0.5
PSMB2-201ENST00000373237 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
PSMB2-201ENST00000373237 RAPGEF2Q9Y4G8 1499 aa18.17■□□□□ 0.5
PSMB2-201ENST00000373237 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
PSMB2-201ENST00000373237 TOPBP1Q92547 1522 aa18.15■□□□□ 0.5
PSMB2-201ENST00000373237 KIF21AQ7Z4S6 1674 aa18.14■□□□□ 0.49
PSMB2-201ENST00000373237 CUX2O14529 1486 aa18.14■□□□□ 0.49
PSMB2-201ENST00000373237 URB2Q14146 1524 aaKnown RBP18.09■□□□□ 0.49
PSMB2-201ENST00000373237 PRXQ9BXM0 1461 aa18.08■□□□□ 0.49
PSMB2-201ENST00000373237 POLA1P09884 1462 aaPredicted RBP18.08■□□□□ 0.48
PSMB2-201ENST00000373237 RAD54L2Q9Y4B4 1467 aa18.07■□□□□ 0.48
PSMB2-201ENST00000373237 TRIM26Q12899 539 aaPredicted RBP18.07■□□□□ 0.48
PSMB2-201ENST00000373237 ERICH3Q5RHP9 1530 aa18.06■□□□□ 0.48
PSMB2-201ENST00000373237 PPARGC1BQ86YN6 1023 aaKnown RBP18.06■□□□□ 0.48
PSMB2-201ENST00000373237 RANGAP1P46060 587 aaPredicted RBP18.05■□□□□ 0.48
PSMB2-201ENST00000373237 CLIP1P30622 1438 aa18.01■□□□□ 0.47
PSMB2-201ENST00000373237 IGF1RP08069 1367 aa18.01■□□□□ 0.47
PSMB2-201ENST00000373237 ABCA10Q8WWZ4 1543 aa17.99■□□□□ 0.47
PSMB2-201ENST00000373237 CARMIL1Q5VZK9 1371 aa17.94■□□□□ 0.46
PSMB2-201ENST00000373237 WDR97A6NE52 1622 aa17.93■□□□□ 0.46
PSMB2-201ENST00000373237 MRC2Q9UBG0 1479 aa17.91■□□□□ 0.46
PSMB2-201ENST00000373237 TTBK1Q5TCY1 1321 aaPredicted RBP17.91■□□□□ 0.46
PSMB2-201ENST00000373237 TDRD9Q8NDG6 1382 aaKnown RBP17.89■□□□□ 0.45
PSMB2-201ENST00000373237 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
PSMB2-201ENST00000373237 ABCA5Q8WWZ7 1642 aa17.85■□□□□ 0.45
PSMB2-201ENST00000373237 VPS8Q8N3P4 1428 aa17.85■□□□□ 0.45
PSMB2-201ENST00000373237 TARBP1Q13395 1621 aaKnown RBP17.85■□□□□ 0.45
PSMB2-201ENST00000373237 CUL7Q14999 1698 aa17.83■□□□□ 0.45
PSMB2-201ENST00000373237 GAPVD1Q14C86 1478 aa17.83■□□□□ 0.44
PSMB2-201ENST00000373237 HRCP23327 699 aa17.83■□□□□ 0.44
PSMB2-201ENST00000373237 ARAP1Q96P48 1450 aa17.8■□□□□ 0.44
PSMB2-201ENST00000373237 WDR62O43379 1518 aa17.8■□□□□ 0.44
PSMB2-201ENST00000373237 ARHGAP35Q9NRY4 1499 aa17.76■□□□□ 0.43
PSMB2-201ENST00000373237 APLP2Q06481 763 aa17.75■□□□□ 0.43
PSMB2-201ENST00000373237 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
PSMB2-201ENST00000373237 AQRO60306 1485 aaKnown RBP eCLIP17.74■□□□□ 0.431e-6■■□□□ 12.5
PSMB2-201ENST00000373237 THOC2Q8NI27 1593 aaKnown RBP17.72■□□□□ 0.43
PSMB2-201ENST00000373237 CTTNBP2Q8WZ74 1663 aa17.71■□□□□ 0.43
PSMB2-201ENST00000373237 IFT140Q96RY7 1462 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms