RNA–Protein interactions for RNA: ENST00000373190.5

PTPRT-204, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-204ENST00000373190 DCAF8L2P0C7V8 631 aa14.4□□□□□ -0.1
PTPRT-204ENST00000373190 PELP1Q8IZL8 1130 aaKnown RBP14.29□□□□□ -0.12
PTPRT-204ENST00000373190 SUPT5HO00267 1087 aaKnown RBP14.05□□□□□ -0.16
PTPRT-204ENST00000373190 MYT1Q01538 1121 aa13.82□□□□□ -0.2
PTPRT-204ENST00000373190 NISCHQ9Y2I1 1504 aa13.77□□□□□ -0.2
PTPRT-204ENST00000373190 SHROOM4Q9ULL8 1493 aa13.69□□□□□ -0.22
PTPRT-204ENST00000373190 CENPBP07199 599 aaPredicted RBP13.67□□□□□ -0.22
PTPRT-204ENST00000373190 ERICH6Q7L0X2 663 aa13.63□□□□□ -0.23
PTPRT-204ENST00000373190 PCGF6Q9BYE7 350 aa13.61□□□□□ -0.23
PTPRT-204ENST00000373190 EHMT2Q96KQ7 1210 aa13.61□□□□□ -0.23
PTPRT-204ENST00000373190 CCER1Q8TC90 406 aaPredicted RBP13.59□□□□□ -0.23
PTPRT-204ENST00000373190 ZEB1P37275 1124 aaPredicted RBP13.55□□□□□ -0.24
PTPRT-204ENST00000373190 APLP2Q06481 763 aa13.55□□□□□ -0.24
PTPRT-204ENST00000373190 NEFLP07196 543 aa13.28□□□□□ -0.28
PTPRT-204ENST00000373190 TTBK1Q5TCY1 1321 aaPredicted RBP13.27□□□□□ -0.29
PTPRT-204ENST00000373190 FAM9AQ8IZU1 332 aaPredicted RBP13.24□□□□□ -0.29
PTPRT-204ENST00000373190 YTHDC1Q96MU7 727 aaKnown RBP13.18□□□□□ -0.3
PTPRT-204ENST00000373190 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
PTPRT-204ENST00000373190 HRCP23327 699 aa13.03□□□□□ -0.32
PTPRT-204ENST00000373190 TRIM26Q12899 539 aaPredicted RBP12.99□□□□□ -0.33
PTPRT-204ENST00000373190 DAXXQ9UER7 740 aaPredicted RBP12.96□□□□□ -0.34
PTPRT-204ENST00000373190 RANGAP1P46060 587 aaPredicted RBP12.93□□□□□ -0.34
PTPRT-204ENST00000373190 UBTFP17480 764 aaKnown RBP12.89□□□□□ -0.35
PTPRT-204ENST00000373190 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.36
PTPRT-204ENST00000373190 RTL5Q5HYW3 569 aaPredicted RBP12.8□□□□□ -0.36
PTPRT-204ENST00000373190 PPARGC1BQ86YN6 1023 aaKnown RBP12.74□□□□□ -0.37
PTPRT-204ENST00000373190 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
PTPRT-204ENST00000373190 ZNF316A6NFI3 1004 aaPredicted RBP12.67□□□□□ -0.38
PTPRT-204ENST00000373190 GTF3C3Q9Y5Q9 886 aa12.57□□□□□ -0.4
PTPRT-204ENST00000373190 POLR3GLQ9BT43 218 aa12.53□□□□□ -0.4
PTPRT-204ENST00000373190 ITGAEP38570 1179 aa12.52□□□□□ -0.41
PTPRT-204ENST00000373190 LOC105371045A0A1W2PR82 267 aa12.52□□□□□ -0.41
PTPRT-204ENST00000373190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.5□□□□□ -0.41
PTPRT-204ENST00000373190 CLSPNQ9HAW4 1339 aa12.49□□□□□ -0.41
PTPRT-204ENST00000373190 HNRNPUL2Q1KMD3 747 aaKnown RBP12.49□□□□□ -0.41
PTPRT-204ENST00000373190 CHIC1Q5VXU3 224 aa12.47□□□□□ -0.41
PTPRT-204ENST00000373190 CDK11AQ9UQ88 783 aaPredicted RBP12.44□□□□□ -0.42
PTPRT-204ENST00000373190 BCANQ96GW7 911 aa12.41□□□□□ -0.42
PTPRT-204ENST00000373190 CNGB1Q14028 1251 aaPredicted RBP12.39□□□□□ -0.43
PTPRT-204ENST00000373190 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
PTPRT-204ENST00000373190 ANP32CO43423 234 aa12.33□□□□□ -0.44
PTPRT-204ENST00000373190 ANP32AP39687 249 aaKnown RBP12.3□□□□□ -0.44
PTPRT-204ENST00000373190 MYT1LQ9UL68 1186 aa12.25□□□□□ -0.45
PTPRT-204ENST00000373190 SLC4A1APQ9BWU0 796 aaKnown RBP12.24□□□□□ -0.45
PTPRT-204ENST00000373190 EIF5BO60841 1220 aaKnown RBP12.23□□□□□ -0.45
PTPRT-204ENST00000373190 GLIPR1L2Q4G1C9 344 aa12.23□□□□□ -0.45
PTPRT-204ENST00000373190 NEUROD1Q13562 356 aa12.19□□□□□ -0.46
PTPRT-204ENST00000373190 FAM50AQ14320 339 aaKnown RBP12.18□□□□□ -0.46
PTPRT-204ENST00000373190 ZBTB47Q9UFB7 747 aaPredicted RBP12.16□□□□□ -0.46
PTPRT-204ENST00000373190 ANP32BQ92688 251 aaKnown RBP12.14□□□□□ -0.47
PTPRT-204ENST00000373190 CANXP27824 592 aaKnown RBP12.11□□□□□ -0.47
PTPRT-204ENST00000373190 TRIM52Q96A61 297 aa12.11□□□□□ -0.47
PTPRT-204ENST00000373190 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
PTPRT-204ENST00000373190 FKBP8Q14318 412 aa12.05□□□□□ -0.48
PTPRT-204ENST00000373190 DCAF1Q9Y4B6 1507 aa12.04□□□□□ -0.48
PTPRT-204ENST00000373190 ZNF326Q5BKZ1 582 aaKnown RBP12.01□□□□□ -0.49
PTPRT-204ENST00000373190 NBR1Q14596 966 aa12.01□□□□□ -0.49
PTPRT-204ENST00000373190 HSP90AA1P07900 732 aaKnown RBP12□□□□□ -0.49
PTPRT-204ENST00000373190 SCAF1Q9H7N4 1312 aaKnown RBP12□□□□□ -0.49
PTPRT-204ENST00000373190 UPF2Q9HAU5 1272 aaKnown RBP11.98□□□□□ -0.49
PTPRT-204ENST00000373190 NEFMP07197 916 aa11.94□□□□□ -0.5
PTPRT-204ENST00000373190 BCL11AQ9H165 835 aa11.92□□□□□ -0.5
PTPRT-204ENST00000373190 HNRNPUQ00839 825 aaKnown RBP eCLIP11.92□□□□□ -0.5
PTPRT-204ENST00000373190 CCDC136Q96JN2 1154 aa11.89□□□□□ -0.51
PTPRT-204ENST00000373190 CCDC180Q9P1Z9 1646 aa11.88□□□□□ -0.51
PTPRT-204ENST00000373190 TONSLQ96HA7 1378 aa11.86□□□□□ -0.51
PTPRT-204ENST00000373190 ANP32EQ9BTT0 268 aa11.85□□□□□ -0.51
PTPRT-204ENST00000373190 SLC24A1O60721 1099 aa11.82□□□□□ -0.52
PTPRT-204ENST00000373190 ARXQ96QS3 562 aa11.82□□□□□ -0.52
PTPRT-204ENST00000373190 FAM9BQ8IZU0 186 aa11.81□□□□□ -0.52
PTPRT-204ENST00000373190 DDX10Q13206 875 aaKnown RBP11.8□□□□□ -0.52
PTPRT-204ENST00000373190 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.8□□□□□ -0.52
PTPRT-204ENST00000373190 DDRGK1Q96HY6 314 aa11.78□□□□□ -0.52
PTPRT-204ENST00000373190 TRIM44Q96DX7 344 aaPredicted RBP11.76□□□□□ -0.53
PTPRT-204ENST00000373190 MIER1Q8N108 512 aa11.76□□□□□ -0.53
PTPRT-204ENST00000373190 TNNT2P45379 298 aaPredicted RBP11.75□□□□□ -0.53
PTPRT-204ENST00000373190 BECN1Q14457 450 aa11.74□□□□□ -0.53
PTPRT-204ENST00000373190 CSRNP3Q8WYN3 585 aa11.74□□□□□ -0.53
PTPRT-204ENST00000373190 TMC1Q8TDI8 760 aa11.73□□□□□ -0.53
PTPRT-204ENST00000373190 MRS2Q9HD23 443 aa11.7□□□□□ -0.54
PTPRT-204ENST00000373190 IRX6P78412 446 aaPredicted RBP11.69□□□□□ -0.54
PTPRT-204ENST00000373190 ERICH6BQ5W0A0 696 aa11.68□□□□□ -0.54
PTPRT-204ENST00000373190 SALL2Q9Y467 1007 aaPredicted RBP11.67□□□□□ -0.54
PTPRT-204ENST00000373190 GOLGA6L22H0YM25 854 aa11.67□□□□□ -0.54
PTPRT-204ENST00000373190 WDR43Q15061 677 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTPRT-204ENST00000373190 PPM1GO15355 546 aaPredicted RBP11.64□□□□□ -0.55
PTPRT-204ENST00000373190 P3H3Q8IVL6 736 aa11.63□□□□□ -0.55
PTPRT-204ENST00000373190 NAP1L5Q96NT1 182 aaPredicted RBP11.62□□□□□ -0.55
PTPRT-204ENST00000373190 MYH16Q9H6N6 1097 aa11.62□□□□□ -0.55
PTPRT-204ENST00000373190 NOP58Q9Y2X3 529 aaKnown RBP11.6□□□□□ -0.55
PTPRT-204ENST00000373190 ZNF777Q9ULD5 760 aaPredicted RBP11.6□□□□□ -0.55
PTPRT-204ENST00000373190 NCLP19338 710 aaKnown RBP11.59□□□□□ -0.55
PTPRT-204ENST00000373190 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
PTPRT-204ENST00000373190 SCRIBQ14160 1630 aa11.58□□□□□ -0.56
PTPRT-204ENST00000373190 PTMAP06454 111 aaKnown RBP11.57□□□□□ -0.56
PTPRT-204ENST00000373190 DNTTIP2Q5QJE6 756 aaKnown RBP11.57□□□□□ -0.56
PTPRT-204ENST00000373190 ARID3CA6NKF2 412 aa11.56□□□□□ -0.56
PTPRT-204ENST00000373190 CDK11BP21127 795 aaKnown RBP11.55□□□□□ -0.56
PTPRT-204ENST00000373190 FBLN2P98095 1184 aa11.53□□□□□ -0.56
PTPRT-204ENST00000373190 SUPT16HQ9Y5B9 1047 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms