RNA–Protein interactions for RNA: ENST00000371177.2

TM2D1-202, Transcript of TM2 domain containing 1, humanhuman

TSL 5 BASIC

Gene TM2D1, Length 3,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-202ENST00000371177 NISCHQ9Y2I1 1504 aa21.27■■□□□ 1
TM2D1-202ENST00000371177 HRCP23327 699 aa18.23■□□□□ 0.51
TM2D1-202ENST00000371177 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
TM2D1-202ENST00000371177 ZCCHC6Q5VYS8 1495 aaKnown RBP18.18■□□□□ 0.5
TM2D1-202ENST00000371177 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
TM2D1-202ENST00000371177 MYO15BQ96JP2 1530 aa18■□□□□ 0.47
TM2D1-202ENST00000371177 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
TM2D1-202ENST00000371177 DCAF1Q9Y4B6 1507 aa17.95■□□□□ 0.46
TM2D1-202ENST00000371177 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
TM2D1-202ENST00000371177 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
TM2D1-202ENST00000371177 PELP1Q8IZL8 1130 aaKnown RBP17.62■□□□□ 0.41
TM2D1-202ENST00000371177 PCGF6Q9BYE7 350 aa17.52■□□□□ 0.4
TM2D1-202ENST00000371177 PPARGC1BQ86YN6 1023 aaKnown RBP17.41■□□□□ 0.38
TM2D1-202ENST00000371177 TRIM26Q12899 539 aaPredicted RBP17.36■□□□□ 0.37
TM2D1-202ENST00000371177 ZEB1P37275 1124 aaPredicted RBP17.34■□□□□ 0.37
TM2D1-202ENST00000371177 ABCC9O60706 1549 aa17.31■□□□□ 0.36
TM2D1-202ENST00000371177 LOC105371045A0A1W2PR82 267 aa17.04■□□□□ 0.32
TM2D1-202ENST00000371177 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
TM2D1-202ENST00000371177 MYT1Q01538 1121 aa17.01■□□□□ 0.31
TM2D1-202ENST00000371177 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
TM2D1-202ENST00000371177 RSF1Q96T23 1441 aaPredicted RBP16.92■□□□□ 0.3
TM2D1-202ENST00000371177 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
TM2D1-202ENST00000371177 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.28
TM2D1-202ENST00000371177 ACIN1Q9UKV3 1341 aaKnown RBP16.74■□□□□ 0.27
TM2D1-202ENST00000371177 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.26
TM2D1-202ENST00000371177 TRIM41Q8WV44 630 aa16.61■□□□□ 0.25
TM2D1-202ENST00000371177 SCRIBQ14160 1630 aa16.6■□□□□ 0.25
TM2D1-202ENST00000371177 BAZ1AQ9NRL2 1556 aaPredicted RBP16.56■□□□□ 0.24
TM2D1-202ENST00000371177 NEUROD1Q13562 356 aa16.55■□□□□ 0.24
TM2D1-202ENST00000371177 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
TM2D1-202ENST00000371177 NACADO15069 1562 aa16.47■□□□□ 0.23
TM2D1-202ENST00000371177 PABPN1Q86U42 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
TM2D1-202ENST00000371177 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
TM2D1-202ENST00000371177 WIZO95785 1651 aa16.4■□□□□ 0.22
TM2D1-202ENST00000371177 DIEXFQ68CQ4 756 aaKnown RBP16.4■□□□□ 0.22
TM2D1-202ENST00000371177 GTF3C3Q9Y5Q9 886 aa16.39■□□□□ 0.21
TM2D1-202ENST00000371177 FAM9AQ8IZU1 332 aaPredicted RBP16.38■□□□□ 0.21
TM2D1-202ENST00000371177 CECR2Q9BXF3 1484 aa16.34■□□□□ 0.21
TM2D1-202ENST00000371177 EEA1Q15075 1411 aa16.33■□□□□ 0.2
TM2D1-202ENST00000371177 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
TM2D1-202ENST00000371177 TOP2AP11388 1531 aaKnown RBP16.3■□□□□ 0.2
TM2D1-202ENST00000371177 CCER1Q8TC90 406 aaPredicted RBP16.29■□□□□ 0.2
TM2D1-202ENST00000371177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.27■□□□□ 0.19
TM2D1-202ENST00000371177 CEP162Q5TB80 1403 aa16.25■□□□□ 0.19
TM2D1-202ENST00000371177 CLSPNQ9HAW4 1339 aa16.24■□□□□ 0.19
TM2D1-202ENST00000371177 ZNF316A6NFI3 1004 aaPredicted RBP16.23■□□□□ 0.19
TM2D1-202ENST00000371177 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
TM2D1-202ENST00000371177 KIF21BO75037 1637 aa16.17■□□□□ 0.18
TM2D1-202ENST00000371177 CCDC88BA6NC98 1476 aa16.15■□□□□ 0.18
TM2D1-202ENST00000371177 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
TM2D1-202ENST00000371177 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
TM2D1-202ENST00000371177 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
TM2D1-202ENST00000371177 TTBK1Q5TCY1 1321 aaPredicted RBP16.05■□□□□ 0.16
TM2D1-202ENST00000371177 BAZ1BQ9UIG0 1483 aaKnown RBP16.04■□□□□ 0.16
TM2D1-202ENST00000371177 PEG3Q9GZU2 1588 aa16.02■□□□□ 0.16
TM2D1-202ENST00000371177 SOGA1O94964 1423 aa16.01■□□□□ 0.15
TM2D1-202ENST00000371177 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
TM2D1-202ENST00000371177 MIER1Q8N108 512 aa15.95■□□□□ 0.14
TM2D1-202ENST00000371177 VPS8Q8N3P4 1428 aa15.93■□□□□ 0.14
TM2D1-202ENST00000371177 CUX2O14529 1486 aa15.93■□□□□ 0.14
TM2D1-202ENST00000371177 UNC13AQ9UPW8 1703 aa15.92■□□□□ 0.14
TM2D1-202ENST00000371177 RANGAP1P46060 587 aaPredicted RBP15.91■□□□□ 0.14
TM2D1-202ENST00000371177 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
TM2D1-202ENST00000371177 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
TM2D1-202ENST00000371177 CLIP1P30622 1438 aa15.86■□□□□ 0.13
TM2D1-202ENST00000371177 SYNJ1O43426 1573 aa15.83■□□□□ 0.13
TM2D1-202ENST00000371177 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
TM2D1-202ENST00000371177 SUPT16HQ9Y5B9 1047 aaKnown RBP15.8■□□□□ 0.12
TM2D1-202ENST00000371177 DHX57Q6P158 1386 aaKnown RBP15.77■□□□□ 0.12
TM2D1-202ENST00000371177 BIVM-ERCC5R4GMW8 1640 aa15.76■□□□□ 0.11
TM2D1-202ENST00000371177 RRBP1Q9P2E9 1410 aaKnown RBP15.76■□□□□ 0.11
TM2D1-202ENST00000371177 ANP32EQ9BTT0 268 aa15.73■□□□□ 0.11
TM2D1-202ENST00000371177 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
TM2D1-202ENST00000371177 TSHZ2Q9NRE2 1034 aa15.7■□□□□ 0.1
TM2D1-202ENST00000371177 YTHDC1Q96MU7 727 aaKnown RBP15.7■□□□□ 0.1
TM2D1-202ENST00000371177 RAPGEF2Q9Y4G8 1499 aa15.66■□□□□ 0.1
TM2D1-202ENST00000371177 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
TM2D1-202ENST00000371177 PRXQ9BXM0 1461 aa15.64■□□□□ 0.09
TM2D1-202ENST00000371177 MAP3K1Q13233 1512 aa15.63■□□□□ 0.09
TM2D1-202ENST00000371177 UBTFP17480 764 aaKnown RBP15.62■□□□□ 0.09
TM2D1-202ENST00000371177 BICRAQ9NZM4 1560 aa15.61■□□□□ 0.09
TM2D1-202ENST00000371177 MAPKBP1O60336 1514 aa15.57■□□□□ 0.08
TM2D1-202ENST00000371177 HNRNPUL2Q1KMD3 747 aaKnown RBP15.54■□□□□ 0.08
TM2D1-202ENST00000371177 BCL11AQ9H165 835 aa15.49■□□□□ 0.07
TM2D1-202ENST00000371177 ATAD2BQ9ULI0 1458 aa15.47■□□□□ 0.07
TM2D1-202ENST00000371177 TIMELESSQ9UNS1 1208 aa15.43■□□□□ 0.06
TM2D1-202ENST00000371177 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
TM2D1-202ENST00000371177 CFAP43Q8NDM7 1665 aa15.43■□□□□ 0.06
TM2D1-202ENST00000371177 APLP2Q06481 763 aa15.43■□□□□ 0.06
TM2D1-202ENST00000371177 TIAM1Q13009 1591 aa15.41■□□□□ 0.06
TM2D1-202ENST00000371177 PRDM2Q13029 1718 aa15.41■□□□□ 0.06
TM2D1-202ENST00000371177 CCER2I3L3R5 266 aa15.39■□□□□ 0.05
TM2D1-202ENST00000371177 ARHGAP35Q9NRY4 1499 aa15.39■□□□□ 0.05
TM2D1-202ENST00000371177 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
TM2D1-202ENST00000371177 WDR97A6NE52 1622 aa15.36■□□□□ 0.05
TM2D1-202ENST00000371177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.36■□□□□ 0.05
TM2D1-202ENST00000371177 PPP1R15AO75807 674 aaPredicted RBP15.35■□□□□ 0.05
TM2D1-202ENST00000371177 HMGXB3Q12766 1538 aa15.33■□□□□ 0.04
TM2D1-202ENST00000371177 KANK4Q5T7N3 995 aaPredicted RBP15.32■□□□□ 0.04
TM2D1-202ENST00000371177 FANCIQ9NVI1 1328 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 182.4 ms