RNA–Protein interactions for RNA: ENST00000370197.5

PTBP2-201, Transcript of polypyrimidine tract binding protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP2-201ENST00000370197 NISCHQ9Y2I1 1504 aa19.57■□□□□ 0.72
PTBP2-201ENST00000370197 CCDC180Q9P1Z9 1646 aa16.98■□□□□ 0.31
PTBP2-201ENST00000370197 DCAF8L2P0C7V8 631 aa16.68■□□□□ 0.26
PTBP2-201ENST00000370197 ABCC9O60706 1549 aa16.66■□□□□ 0.26
PTBP2-201ENST00000370197 ZCCHC6Q5VYS8 1495 aaKnown RBP16.37■□□□□ 0.21
PTBP2-201ENST00000370197 SHROOM4Q9ULL8 1493 aa16.2■□□□□ 0.18
PTBP2-201ENST00000370197 DCAF1Q9Y4B6 1507 aa15.99■□□□□ 0.15
PTBP2-201ENST00000370197 NACADO15069 1562 aa15.95■□□□□ 0.14
PTBP2-201ENST00000370197 RB1CC1Q8TDY2 1594 aa15.91■□□□□ 0.14
PTBP2-201ENST00000370197 SCRIBQ14160 1630 aa15.89■□□□□ 0.13
PTBP2-201ENST00000370197 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
PTBP2-201ENST00000370197 PABPN1Q86U42 306 aaKnown RBP eCLIP15.79■□□□□ 0.12
PTBP2-201ENST00000370197 UNC13AQ9UPW8 1703 aa15.59■□□□□ 0.09
PTBP2-201ENST00000370197 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
PTBP2-201ENST00000370197 SUPT5HO00267 1087 aaKnown RBP15.47■□□□□ 0.07
PTBP2-201ENST00000370197 CECR2Q9BXF3 1484 aa15.38■□□□□ 0.05
PTBP2-201ENST00000370197 MROH2BQ7Z745 1585 aa15.2■□□□□ 0.02
PTBP2-201ENST00000370197 RSF1Q96T23 1441 aaPredicted RBP15.17■□□□□ 0.02
PTBP2-201ENST00000370197 BAZ1AQ9NRL2 1556 aaPredicted RBP15.09■□□□□ 0.01
PTBP2-201ENST00000370197 SMARCA4P51532 1647 aa15.08■□□□□ 0
PTBP2-201ENST00000370197 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
PTBP2-201ENST00000370197 WIZO95785 1651 aa15.06■□□□□ 0
PTBP2-201ENST00000370197 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
PTBP2-201ENST00000370197 ATAD2BQ9ULI0 1458 aa14.94□□□□□ -0.02
PTBP2-201ENST00000370197 CC2D2AQ9P2K1 1620 aa14.93□□□□□ -0.02
PTBP2-201ENST00000370197 BAZ1BQ9UIG0 1483 aaKnown RBP14.86□□□□□ -0.03
PTBP2-201ENST00000370197 SMARCA2P51531 1590 aa14.83□□□□□ -0.03
PTBP2-201ENST00000370197 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
PTBP2-201ENST00000370197 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
PTBP2-201ENST00000370197 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
PTBP2-201ENST00000370197 CCDC88BA6NC98 1476 aa14.74□□□□□ -0.05
PTBP2-201ENST00000370197 HMGXB3Q12766 1538 aa14.68□□□□□ -0.06
PTBP2-201ENST00000370197 HRCP23327 699 aa14.64□□□□□ -0.07
PTBP2-201ENST00000370197 NESP48681 1621 aa14.55□□□□□ -0.08
PTBP2-201ENST00000370197 CHIC1Q5VXU3 224 aa14.52□□□□□ -0.09
PTBP2-201ENST00000370197 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
PTBP2-201ENST00000370197 ABCC8Q09428 1581 aa14.44□□□□□ -0.1
PTBP2-201ENST00000370197 TRIM41Q8WV44 630 aa14.43□□□□□ -0.1
PTBP2-201ENST00000370197 CFTRP13569 1480 aa14.42□□□□□ -0.1
PTBP2-201ENST00000370197 FAM9AQ8IZU1 332 aaPredicted RBP14.35□□□□□ -0.11
PTBP2-201ENST00000370197 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
PTBP2-201ENST00000370197 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
PTBP2-201ENST00000370197 WRNQ14191 1432 aaPredicted RBP eCLIP14.29□□□□□ -0.12
PTBP2-201ENST00000370197 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
PTBP2-201ENST00000370197 PDS5BQ9NTI5 1447 aa14.27□□□□□ -0.13
PTBP2-201ENST00000370197 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
PTBP2-201ENST00000370197 PCGF6Q9BYE7 350 aa14.24□□□□□ -0.13
PTBP2-201ENST00000370197 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
PTBP2-201ENST00000370197 PPARGC1BQ86YN6 1023 aaKnown RBP14.23□□□□□ -0.13
PTBP2-201ENST00000370197 SYNJ1O43426 1573 aa14.23□□□□□ -0.13
PTBP2-201ENST00000370197 KIF21AQ7Z4S6 1674 aa14.22□□□□□ -0.13
PTBP2-201ENST00000370197 PELP1Q8IZL8 1130 aaKnown RBP14.2□□□□□ -0.14
PTBP2-201ENST00000370197 CUX1P39880 1505 aa14.2□□□□□ -0.14
PTBP2-201ENST00000370197 URB2Q14146 1524 aaKnown RBP14.16□□□□□ -0.14
PTBP2-201ENST00000370197 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
PTBP2-201ENST00000370197 SOGA1O94964 1423 aa14.14□□□□□ -0.15
PTBP2-201ENST00000370197 RUSC2Q8N2Y8 1516 aa14.12□□□□□ -0.15
PTBP2-201ENST00000370197 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
PTBP2-201ENST00000370197 LOC105371045A0A1W2PR82 267 aa14.12□□□□□ -0.15
PTBP2-201ENST00000370197 RAD54L2Q9Y4B4 1467 aa14.11□□□□□ -0.15
PTBP2-201ENST00000370197 FGD5Q6ZNL6 1462 aa14.11□□□□□ -0.15
PTBP2-201ENST00000370197 TOP2BQ02880 1626 aa14.09□□□□□ -0.15
PTBP2-201ENST00000370197 MRC2Q9UBG0 1479 aa14.09□□□□□ -0.15
PTBP2-201ENST00000370197 POLA1P09884 1462 aaPredicted RBP14.06□□□□□ -0.16
PTBP2-201ENST00000370197 DNMBPQ6XZF7 1577 aa14.06□□□□□ -0.16
PTBP2-201ENST00000370197 TDRD9Q8NDG6 1382 aaKnown RBP14.04□□□□□ -0.16
PTBP2-201ENST00000370197 BIVM-ERCC5R4GMW8 1640 aa14.03□□□□□ -0.16
PTBP2-201ENST00000370197 CUX2O14529 1486 aa14.01□□□□□ -0.17
PTBP2-201ENST00000370197 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
PTBP2-201ENST00000370197 CSRNP3Q8WYN3 585 aa13.97□□□□□ -0.17
PTBP2-201ENST00000370197 WDR62O43379 1518 aa13.97□□□□□ -0.17
PTBP2-201ENST00000370197 RANGAP1P46060 587 aaPredicted RBP13.96□□□□□ -0.17
PTBP2-201ENST00000370197 AQRO60306 1485 aaKnown RBP eCLIP13.96□□□□□ -0.181e-6■■■■□ 23.7
PTBP2-201ENST00000370197 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
PTBP2-201ENST00000370197 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
PTBP2-201ENST00000370197 UBTFP17480 764 aaKnown RBP13.9□□□□□ -0.18
PTBP2-201ENST00000370197 ABCA10Q8WWZ4 1543 aa13.88□□□□□ -0.19
PTBP2-201ENST00000370197 FBLN2P98095 1184 aa13.88□□□□□ -0.19
PTBP2-201ENST00000370197 IGF1RP08069 1367 aa13.87□□□□□ -0.19
PTBP2-201ENST00000370197 TARBP1Q13395 1621 aaKnown RBP13.87□□□□□ -0.19
PTBP2-201ENST00000370197 TRIM26Q12899 539 aaPredicted RBP13.86□□□□□ -0.19
PTBP2-201ENST00000370197 IFT140Q96RY7 1462 aa13.86□□□□□ -0.19
PTBP2-201ENST00000370197 GAPVD1Q14C86 1478 aa13.85□□□□□ -0.19
PTBP2-201ENST00000370197 SCAF1Q9H7N4 1312 aaKnown RBP13.83□□□□□ -0.2
PTBP2-201ENST00000370197 RAPGEF2Q9Y4G8 1499 aa13.82□□□□□ -0.2
PTBP2-201ENST00000370197 EEA1Q15075 1411 aa13.81□□□□□ -0.2
PTBP2-201ENST00000370197 CARMIL1Q5VZK9 1371 aa13.81□□□□□ -0.2
PTBP2-201ENST00000370197 ZEB1P37275 1124 aaPredicted RBP13.79□□□□□ -0.2
PTBP2-201ENST00000370197 WDR97A6NE52 1622 aa13.78□□□□□ -0.2
PTBP2-201ENST00000370197 EIF4G3O43432 1585 aaKnown RBP13.78□□□□□ -0.2
PTBP2-201ENST00000370197 ABCA5Q8WWZ7 1642 aa13.76□□□□□ -0.21
PTBP2-201ENST00000370197 SNAPC4Q5SXM2 1469 aa13.75□□□□□ -0.21
PTBP2-201ENST00000370197 CHMP7Q8WUX9 453 aaPredicted RBP13.75□□□□□ -0.21
PTBP2-201ENST00000370197 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
PTBP2-201ENST00000370197 PRXQ9BXM0 1461 aa13.73□□□□□ -0.21
PTBP2-201ENST00000370197 GOLGA3Q08378 1498 aa13.72□□□□□ -0.21
PTBP2-201ENST00000370197 P3H3Q8IVL6 736 aa13.7□□□□□ -0.22
PTBP2-201ENST00000370197 TTBK1Q5TCY1 1321 aaPredicted RBP13.69□□□□□ -0.22
PTBP2-201ENST00000370197 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
PTBP2-201ENST00000370197 ERICH3Q5RHP9 1530 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms