RNA–Protein interactions for RNA: ENST00000369306.7

PEX11B-201, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX11B, Length 1,740 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-201ENST00000369306 NISCHQ9Y2I1 1504 aa34.11■■■■□ 3.05
PEX11B-201ENST00000369306 CCDC180Q9P1Z9 1646 aa29.54■■■□□ 2.32
PEX11B-201ENST00000369306 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
PEX11B-201ENST00000369306 DCAF1Q9Y4B6 1507 aa28.21■■■□□ 2.11
PEX11B-201ENST00000369306 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
PEX11B-201ENST00000369306 SHROOM4Q9ULL8 1493 aa28.04■■■□□ 2.08
PEX11B-201ENST00000369306 MYO15BQ96JP2 1530 aa27.76■■■□□ 2.03
PEX11B-201ENST00000369306 ABCC9O60706 1549 aa27.68■■■□□ 2.02
PEX11B-201ENST00000369306 NACADO15069 1562 aa27.47■■□□□ 1.99
PEX11B-201ENST00000369306 SCRIBQ14160 1630 aa27.22■■□□□ 1.95
PEX11B-201ENST00000369306 SUPT5HO00267 1087 aaKnown RBP27.14■■□□□ 1.94
PEX11B-201ENST00000369306 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.94
PEX11B-201ENST00000369306 RSF1Q96T23 1441 aaPredicted RBP26.61■■□□□ 1.85
PEX11B-201ENST00000369306 UNC13AQ9UPW8 1703 aa26.58■■□□□ 1.85
PEX11B-201ENST00000369306 CECR2Q9BXF3 1484 aa26.48■■□□□ 1.83
PEX11B-201ENST00000369306 MROH2BQ7Z745 1585 aa26.36■■□□□ 1.81
PEX11B-201ENST00000369306 BICRAQ9NZM4 1560 aa26.35■■□□□ 1.81
PEX11B-201ENST00000369306 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
PEX11B-201ENST00000369306 PABPN1Q86U42 306 aaKnown RBP eCLIP26.19■■□□□ 1.78
PEX11B-201ENST00000369306 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
PEX11B-201ENST00000369306 WIZO95785 1651 aa26.14■■□□□ 1.78
PEX11B-201ENST00000369306 SMARCA4P51532 1647 aa26.13■■□□□ 1.77
PEX11B-201ENST00000369306 TOP2AP11388 1531 aaKnown RBP25.89■■□□□ 1.73
PEX11B-201ENST00000369306 PEG3Q9GZU2 1588 aa25.82■■□□□ 1.72
PEX11B-201ENST00000369306 SMARCA2P51531 1590 aa25.66■■□□□ 1.7
PEX11B-201ENST00000369306 CCDC88BA6NC98 1476 aa25.65■■□□□ 1.7
PEX11B-201ENST00000369306 ATAD2BQ9ULI0 1458 aa25.65■■□□□ 1.7
PEX11B-201ENST00000369306 EIF4G1Q04637 1599 aaKnown RBP25.59■■□□□ 1.69
PEX11B-201ENST00000369306 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
PEX11B-201ENST00000369306 BAZ1BQ9UIG0 1483 aaKnown RBP25.5■■□□□ 1.67
PEX11B-201ENST00000369306 NCAPD3P42695 1498 aa25.38■■□□□ 1.65
PEX11B-201ENST00000369306 HMGXB3Q12766 1538 aa25.34■■□□□ 1.65
PEX11B-201ENST00000369306 ABCC8Q09428 1581 aa25.19■■□□□ 1.62
PEX11B-201ENST00000369306 LOC105371045A0A1W2PR82 267 aa25.19■■□□□ 1.62
PEX11B-201ENST00000369306 CC2D2AQ9P2K1 1620 aa25.05■■□□□ 1.6
PEX11B-201ENST00000369306 FAM9AQ8IZU1 332 aaPredicted RBP25.03■■□□□ 1.6
PEX11B-201ENST00000369306 WRNQ14191 1432 aaPredicted RBP eCLIP25.01■■□□□ 1.59
PEX11B-201ENST00000369306 CFTRP13569 1480 aa24.9■■□□□ 1.58
PEX11B-201ENST00000369306 SYNJ1O43426 1573 aa24.88■■□□□ 1.57
PEX11B-201ENST00000369306 SOGA1O94964 1423 aa24.82■■□□□ 1.56
PEX11B-201ENST00000369306 EEA1Q15075 1411 aa24.82■■□□□ 1.56
PEX11B-201ENST00000369306 TOP2BQ02880 1626 aa24.76■■□□□ 1.55
PEX11B-201ENST00000369306 CADPSQ9ULU8 1353 aa24.75■■□□□ 1.55
PEX11B-201ENST00000369306 BIVM-ERCC5R4GMW8 1640 aa24.71■■□□□ 1.55
PEX11B-201ENST00000369306 PRDM2Q13029 1718 aa24.71■■□□□ 1.55
PEX11B-201ENST00000369306 RUSC2Q8N2Y8 1516 aa24.7■■□□□ 1.54
PEX11B-201ENST00000369306 CSRNP3Q8WYN3 585 aa24.67■■□□□ 1.54
PEX11B-201ENST00000369306 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
PEX11B-201ENST00000369306 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.53
PEX11B-201ENST00000369306 CUX1P39880 1505 aa24.63■■□□□ 1.53
PEX11B-201ENST00000369306 TNIKQ9UKE5 1360 aa24.5■■□□□ 1.51
PEX11B-201ENST00000369306 GOLGA3Q08378 1498 aa24.48■■□□□ 1.51
PEX11B-201ENST00000369306 FANCD2Q9BXW9 1451 aa24.46■■□□□ 1.51
PEX11B-201ENST00000369306 KIF21BO75037 1637 aa24.46■■□□□ 1.51
PEX11B-201ENST00000369306 CEP164Q9UPV0 1460 aa24.46■■□□□ 1.51
PEX11B-201ENST00000369306 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
PEX11B-201ENST00000369306 NESP48681 1621 aa24.42■■□□□ 1.5
PEX11B-201ENST00000369306 CEP162Q5TB80 1403 aa24.38■■□□□ 1.49
PEX11B-201ENST00000369306 UBTFP17480 764 aaKnown RBP24.36■■□□□ 1.49
PEX11B-201ENST00000369306 PCGF6Q9BYE7 350 aa24.35■■□□□ 1.49
PEX11B-201ENST00000369306 KIF27Q86VH2 1401 aa24.35■■□□□ 1.49
PEX11B-201ENST00000369306 FGD5Q6ZNL6 1462 aa24.3■■□□□ 1.48
PEX11B-201ENST00000369306 DNMBPQ6XZF7 1577 aa24.29■■□□□ 1.48
PEX11B-201ENST00000369306 TRIM26Q12899 539 aaPredicted RBP24.29■■□□□ 1.48
PEX11B-201ENST00000369306 PRXQ9BXM0 1461 aa24.28■■□□□ 1.48
PEX11B-201ENST00000369306 RAPGEF2Q9Y4G8 1499 aa24.28■■□□□ 1.48
PEX11B-201ENST00000369306 ERICH3Q5RHP9 1530 aa24.26■■□□□ 1.47
PEX11B-201ENST00000369306 PDS5BQ9NTI5 1447 aa24.25■■□□□ 1.47
PEX11B-201ENST00000369306 TOPBP1Q92547 1522 aa24.24■■□□□ 1.47
PEX11B-201ENST00000369306 CUX2O14529 1486 aa24.2■■□□□ 1.46
PEX11B-201ENST00000369306 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
PEX11B-201ENST00000369306 POLA1P09884 1462 aaPredicted RBP24.14■■□□□ 1.46
PEX11B-201ENST00000369306 IGF1RP08069 1367 aa24.13■■□□□ 1.45
PEX11B-201ENST00000369306 CLIP1P30622 1438 aa24.11■■□□□ 1.45
PEX11B-201ENST00000369306 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
PEX11B-201ENST00000369306 KIF21AQ7Z4S6 1674 aa24.07■■□□□ 1.44
PEX11B-201ENST00000369306 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
PEX11B-201ENST00000369306 CARMIL1Q5VZK9 1371 aa23.99■■□□□ 1.43
PEX11B-201ENST00000369306 WDR97A6NE52 1622 aa23.96■■□□□ 1.43
PEX11B-201ENST00000369306 PPARGC1BQ86YN6 1023 aaKnown RBP23.96■■□□□ 1.43
PEX11B-201ENST00000369306 VPS8Q8N3P4 1428 aa23.95■■□□□ 1.42
PEX11B-201ENST00000369306 HRCP23327 699 aa23.94■■□□□ 1.42
PEX11B-201ENST00000369306 MRC2Q9UBG0 1479 aa23.91■■□□□ 1.42
PEX11B-201ENST00000369306 ABCA5Q8WWZ7 1642 aa23.86■■□□□ 1.41
PEX11B-201ENST00000369306 CUL7Q14999 1698 aa23.85■■□□□ 1.41
PEX11B-201ENST00000369306 TARBP1Q13395 1621 aaKnown RBP23.85■■□□□ 1.41
PEX11B-201ENST00000369306 RANGAP1P46060 587 aaPredicted RBP23.84■■□□□ 1.41
PEX11B-201ENST00000369306 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
PEX11B-201ENST00000369306 TDRD9Q8NDG6 1382 aaKnown RBP23.82■■□□□ 1.4
PEX11B-201ENST00000369306 GAPVD1Q14C86 1478 aa23.81■■□□□ 1.4
PEX11B-201ENST00000369306 ARHGAP35Q9NRY4 1499 aa23.77■■□□□ 1.4
PEX11B-201ENST00000369306 WDR62O43379 1518 aa23.77■■□□□ 1.4
PEX11B-201ENST00000369306 APLP2Q06481 763 aa23.69■■□□□ 1.38
PEX11B-201ENST00000369306 ERCC6Q03468 1493 aa23.68■■□□□ 1.38
PEX11B-201ENST00000369306 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
PEX11B-201ENST00000369306 TTBK1Q5TCY1 1321 aaPredicted RBP23.68■■□□□ 1.38
PEX11B-201ENST00000369306 THOC2Q8NI27 1593 aaKnown RBP23.62■■□□□ 1.37
PEX11B-201ENST00000369306 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.372e-7■■■■■ 48.2
PEX11B-201ENST00000369306 CTTNBP2Q8WZ74 1663 aa23.61■■□□□ 1.37
PEX11B-201ENST00000369306 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms