RNA–Protein interactions for RNA: ENST00000369040.7

ATE1-202, Transcript of arginyltransferase 1, humanhuman

TSL 2 BASIC

Gene ATE1, Length 4,803 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATE1-202ENST00000369040 NISCHQ9Y2I1 1504 aa25.38■■□□□ 1.65
ATE1-202ENST00000369040 SUPT5HO00267 1087 aaKnown RBP24.25■■□□□ 1.47
ATE1-202ENST00000369040 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
ATE1-202ENST00000369040 DCAF8L2P0C7V8 631 aa23.82■■□□□ 1.4
ATE1-202ENST00000369040 PCGF6Q9BYE7 350 aa23.66■■□□□ 1.38
ATE1-202ENST00000369040 HRCP23327 699 aa23.32■■□□□ 1.32
ATE1-202ENST00000369040 PPARGC1BQ86YN6 1023 aaKnown RBP23.24■■□□□ 1.31
ATE1-202ENST00000369040 EHMT2Q96KQ7 1210 aa23.09■■□□□ 1.29
ATE1-202ENST00000369040 PELP1Q8IZL8 1130 aaKnown RBP22.79■■□□□ 1.24
ATE1-202ENST00000369040 CHIC1Q5VXU3 224 aa22.78■■□□□ 1.24
ATE1-202ENST00000369040 LOC105371045A0A1W2PR82 267 aa22.71■■□□□ 1.23
ATE1-202ENST00000369040 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
ATE1-202ENST00000369040 TRIM26Q12899 539 aaPredicted RBP22.47■■□□□ 1.19
ATE1-202ENST00000369040 TTBK1Q5TCY1 1321 aaPredicted RBP22.42■■□□□ 1.18
ATE1-202ENST00000369040 ZEB1P37275 1124 aaPredicted RBP22.41■■□□□ 1.18
ATE1-202ENST00000369040 CCER1Q8TC90 406 aaPredicted RBP22.22■■□□□ 1.15
ATE1-202ENST00000369040 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
ATE1-202ENST00000369040 MYO15BQ96JP2 1530 aa22.18■■□□□ 1.14
ATE1-202ENST00000369040 CENPBP07199 599 aaPredicted RBP22.16■■□□□ 1.14
ATE1-202ENST00000369040 YTHDC1Q96MU7 727 aaKnown RBP22.11■■□□□ 1.13
ATE1-202ENST00000369040 MYT1Q01538 1121 aa22.05■■□□□ 1.12
ATE1-202ENST00000369040 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
ATE1-202ENST00000369040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.94■■□□□ 1.1
ATE1-202ENST00000369040 GTF3C3Q9Y5Q9 886 aa21.85■■□□□ 1.09
ATE1-202ENST00000369040 DIEXFQ68CQ4 756 aaKnown RBP21.75■■□□□ 1.07
ATE1-202ENST00000369040 ACIN1Q9UKV3 1341 aaKnown RBP21.71■■□□□ 1.07
ATE1-202ENST00000369040 DCAF1Q9Y4B6 1507 aa21.7■■□□□ 1.06
ATE1-202ENST00000369040 NEUROD1Q13562 356 aa21.64■■□□□ 1.06
ATE1-202ENST00000369040 RANGAP1P46060 587 aaPredicted RBP21.56■■□□□ 1.04
ATE1-202ENST00000369040 UBTFP17480 764 aaKnown RBP21.46■■□□□ 1.03
ATE1-202ENST00000369040 APLP2Q06481 763 aa21.44■■□□□ 1.02
ATE1-202ENST00000369040 HNRNPUL2Q1KMD3 747 aaKnown RBP21.37■■□□□ 1.01
ATE1-202ENST00000369040 ZCCHC6Q5VYS8 1495 aaKnown RBP21.35■■□□□ 1.01
ATE1-202ENST00000369040 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
ATE1-202ENST00000369040 ZNF316A6NFI3 1004 aaPredicted RBP21.18■□□□□ 0.98
ATE1-202ENST00000369040 BCANQ96GW7 911 aa21.04■□□□□ 0.96
ATE1-202ENST00000369040 ERICH6Q7L0X2 663 aa20.98■□□□□ 0.95
ATE1-202ENST00000369040 MIER1Q8N108 512 aa20.98■□□□□ 0.95
ATE1-202ENST00000369040 ITGAEP38570 1179 aa20.94■□□□□ 0.94
ATE1-202ENST00000369040 NEFLP07196 543 aa20.93■□□□□ 0.94
ATE1-202ENST00000369040 ATP1B4Q9UN42 357 aaPredicted RBP20.72■□□□□ 0.91
ATE1-202ENST00000369040 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
ATE1-202ENST00000369040 SCRIBQ14160 1630 aa20.59■□□□□ 0.89
ATE1-202ENST00000369040 CSRNP3Q8WYN3 585 aa20.59■□□□□ 0.89
ATE1-202ENST00000369040 FKBP8Q14318 412 aa20.55■□□□□ 0.88
ATE1-202ENST00000369040 SUPT16HQ9Y5B9 1047 aaKnown RBP20.47■□□□□ 0.87
ATE1-202ENST00000369040 ANP32EQ9BTT0 268 aa20.44■□□□□ 0.86
ATE1-202ENST00000369040 CNGB1Q14028 1251 aaPredicted RBP20.43■□□□□ 0.86
ATE1-202ENST00000369040 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
ATE1-202ENST00000369040 BCL11AQ9H165 835 aa20.39■□□□□ 0.86
ATE1-202ENST00000369040 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
ATE1-202ENST00000369040 DDX10Q13206 875 aaKnown RBP20.36■□□□□ 0.85
ATE1-202ENST00000369040 TRIM52Q96A61 297 aa20.35■□□□□ 0.85
ATE1-202ENST00000369040 ABCC9O60706 1549 aa20.32■□□□□ 0.84
ATE1-202ENST00000369040 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
ATE1-202ENST00000369040 FAM50AQ14320 339 aaKnown RBP20.29■□□□□ 0.84
ATE1-202ENST00000369040 HIRIP3Q9BW71 556 aaPredicted RBP20.29■□□□□ 0.84
ATE1-202ENST00000369040 ANP32CO43423 234 aa20.25■□□□□ 0.83
ATE1-202ENST00000369040 TSHZ2Q9NRE2 1034 aa20.25■□□□□ 0.83
ATE1-202ENST00000369040 CDK11AQ9UQ88 783 aaPredicted RBP20.23■□□□□ 0.83
ATE1-202ENST00000369040 IRX6P78412 446 aaPredicted RBP20.22■□□□□ 0.83
ATE1-202ENST00000369040 PABPN1Q86U42 306 aaKnown RBP eCLIP20.19■□□□□ 0.82
ATE1-202ENST00000369040 POLR3GLQ9BT43 218 aa20.18■□□□□ 0.82
ATE1-202ENST00000369040 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
ATE1-202ENST00000369040 SOGA1O94964 1423 aa20.14■□□□□ 0.82
ATE1-202ENST00000369040 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
ATE1-202ENST00000369040 CLIP1P30622 1438 aa20.11■□□□□ 0.81
ATE1-202ENST00000369040 KCNH8Q96L42 1107 aa20.09■□□□□ 0.81
ATE1-202ENST00000369040 HNRNPUQ00839 825 aaKnown RBP eCLIP20.07■□□□□ 0.8
ATE1-202ENST00000369040 RTL5Q5HYW3 569 aaPredicted RBP20.05■□□□□ 0.8
ATE1-202ENST00000369040 RBM19Q9Y4C8 960 aaKnown RBP20.02■□□□□ 0.8
ATE1-202ENST00000369040 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.8
ATE1-202ENST00000369040 NBR1Q14596 966 aa20.02■□□□□ 0.8
ATE1-202ENST00000369040 ABCC8Q09428 1581 aa20.01■□□□□ 0.79
ATE1-202ENST00000369040 P3H3Q8IVL6 736 aa19.99■□□□□ 0.79
ATE1-202ENST00000369040 GOLGA3Q08378 1498 aa19.98■□□□□ 0.79
ATE1-202ENST00000369040 MROH2BQ7Z745 1585 aa19.96■□□□□ 0.79
ATE1-202ENST00000369040 SIN3AQ96ST3 1273 aa19.92■□□□□ 0.78
ATE1-202ENST00000369040 FAM9BQ8IZU0 186 aa19.88■□□□□ 0.77
ATE1-202ENST00000369040 WRNQ14191 1432 aaPredicted RBP eCLIP19.85■□□□□ 0.77
ATE1-202ENST00000369040 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
ATE1-202ENST00000369040 NPM2Q86SE8 214 aaKnown RBP19.84■□□□□ 0.77
ATE1-202ENST00000369040 SENP3-EIF4A1A0A087X0R7 540 aa19.83■□□□□ 0.76
ATE1-202ENST00000369040 EEA1Q15075 1411 aa19.82■□□□□ 0.76
ATE1-202ENST00000369040 KANK4Q5T7N3 995 aaPredicted RBP19.81■□□□□ 0.76
ATE1-202ENST00000369040 WIZO95785 1651 aa19.8■□□□□ 0.76
ATE1-202ENST00000369040 TONSLQ96HA7 1378 aa19.77■□□□□ 0.76
ATE1-202ENST00000369040 DAXXQ9UER7 740 aaPredicted RBP19.75■□□□□ 0.75
ATE1-202ENST00000369040 ANP32AP39687 249 aaKnown RBP19.75■□□□□ 0.75
ATE1-202ENST00000369040 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
ATE1-202ENST00000369040 ZNF326Q5BKZ1 582 aaKnown RBP19.72■□□□□ 0.75
ATE1-202ENST00000369040 VPS8Q8N3P4 1428 aa19.71■□□□□ 0.75
ATE1-202ENST00000369040 DHX57Q6P158 1386 aaKnown RBP19.7■□□□□ 0.74
ATE1-202ENST00000369040 B4GALNT3Q6L9W6 998 aa19.69■□□□□ 0.74
ATE1-202ENST00000369040 DEKP35659 375 aaKnown RBP19.66■□□□□ 0.74
ATE1-202ENST00000369040 RTN4Q9NQC3 1192 aaKnown RBP19.66■□□□□ 0.74
ATE1-202ENST00000369040 MRS2Q9HD23 443 aa19.65■□□□□ 0.74
ATE1-202ENST00000369040 CCDC136Q96JN2 1154 aa19.62■□□□□ 0.73
ATE1-202ENST00000369040 ZBTB47Q9UFB7 747 aaPredicted RBP19.61■□□□□ 0.73
ATE1-202ENST00000369040 ARID3CA6NKF2 412 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms