RNA–Protein interactions for RNA: ENST00000367500.8

SWT1-201, Transcript of SWT1, RNA endoribonuclease homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWT1, Length 3,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWT1-201ENST00000367500 NISCHQ9Y2I1 1504 aa20.6■□□□□ 0.89
SWT1-201ENST00000367500 CCDC180Q9P1Z9 1646 aa18.33■□□□□ 0.53
SWT1-201ENST00000367500 HRCP23327 699 aa17.85■□□□□ 0.45
SWT1-201ENST00000367500 PELP1Q8IZL8 1130 aaKnown RBP17.82■□□□□ 0.44
SWT1-201ENST00000367500 PPARGC1BQ86YN6 1023 aaKnown RBP17.71■□□□□ 0.43
SWT1-201ENST00000367500 PCGF6Q9BYE7 350 aa17.48■□□□□ 0.39
SWT1-201ENST00000367500 ZCCHC6Q5VYS8 1495 aaKnown RBP17.39■□□□□ 0.37
SWT1-201ENST00000367500 DCAF1Q9Y4B6 1507 aa17.31■□□□□ 0.36
SWT1-201ENST00000367500 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
SWT1-201ENST00000367500 MYT1Q01538 1121 aa17.2■□□□□ 0.34
SWT1-201ENST00000367500 MYO15BQ96JP2 1530 aa17.18■□□□□ 0.34
SWT1-201ENST00000367500 SUPT5HO00267 1087 aaKnown RBP17.03■□□□□ 0.32
SWT1-201ENST00000367500 DCAF8L2P0C7V8 631 aa16.96■□□□□ 0.31
SWT1-201ENST00000367500 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
SWT1-201ENST00000367500 NACADO15069 1562 aa16.85■□□□□ 0.29
SWT1-201ENST00000367500 UNC13AQ9UPW8 1703 aa16.72■□□□□ 0.27
SWT1-201ENST00000367500 ABCC9O60706 1549 aa16.7■□□□□ 0.26
SWT1-201ENST00000367500 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
SWT1-201ENST00000367500 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
SWT1-201ENST00000367500 NEUROD1Q13562 356 aa16.63■□□□□ 0.25
SWT1-201ENST00000367500 GTF3C3Q9Y5Q9 886 aa16.63■□□□□ 0.25
SWT1-201ENST00000367500 ACIN1Q9UKV3 1341 aaKnown RBP16.62■□□□□ 0.25
SWT1-201ENST00000367500 TRIM26Q12899 539 aaPredicted RBP16.57■□□□□ 0.24
SWT1-201ENST00000367500 LOC105371045A0A1W2PR82 267 aa16.54■□□□□ 0.24
SWT1-201ENST00000367500 ZEB1P37275 1124 aaPredicted RBP16.52■□□□□ 0.24
SWT1-201ENST00000367500 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
SWT1-201ENST00000367500 SCRIBQ14160 1630 aa16.38■□□□□ 0.21
SWT1-201ENST00000367500 CENPBP07199 599 aaPredicted RBP16.38■□□□□ 0.21
SWT1-201ENST00000367500 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
SWT1-201ENST00000367500 BCL11AQ9H165 835 aa16.29■□□□□ 0.2
SWT1-201ENST00000367500 YTHDC1Q96MU7 727 aaKnown RBP16.18■□□□□ 0.18
SWT1-201ENST00000367500 TTBK1Q5TCY1 1321 aaPredicted RBP16.18■□□□□ 0.18
SWT1-201ENST00000367500 FAM9AQ8IZU1 332 aaPredicted RBP16.17■□□□□ 0.18
SWT1-201ENST00000367500 DIEXFQ68CQ4 756 aaKnown RBP16.15■□□□□ 0.18
SWT1-201ENST00000367500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
SWT1-201ENST00000367500 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
SWT1-201ENST00000367500 PEG3Q9GZU2 1588 aa15.97■□□□□ 0.15
SWT1-201ENST00000367500 PRKCSHP14314 528 aaPredicted RBP15.95■□□□□ 0.14
SWT1-201ENST00000367500 SMARCA4P51532 1647 aa15.93■□□□□ 0.14
SWT1-201ENST00000367500 ANP32EQ9BTT0 268 aa15.92■□□□□ 0.14
SWT1-201ENST00000367500 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
SWT1-201ENST00000367500 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
SWT1-201ENST00000367500 CECR2Q9BXF3 1484 aa15.86■□□□□ 0.13
SWT1-201ENST00000367500 MROH2BQ7Z745 1585 aa15.85■□□□□ 0.13
SWT1-201ENST00000367500 RSF1Q96T23 1441 aaPredicted RBP15.82■□□□□ 0.12
SWT1-201ENST00000367500 WIZO95785 1651 aa15.77■□□□□ 0.11
SWT1-201ENST00000367500 MIER1Q8N108 512 aa15.71■□□□□ 0.11
SWT1-201ENST00000367500 EIF4G1Q04637 1599 aaKnown RBP15.69■□□□□ 0.1
SWT1-201ENST00000367500 TRIM41Q8WV44 630 aa15.68■□□□□ 0.1
SWT1-201ENST00000367500 TSHZ2Q9NRE2 1034 aa15.68■□□□□ 0.1
SWT1-201ENST00000367500 ZNF316A6NFI3 1004 aaPredicted RBP15.65■□□□□ 0.1
SWT1-201ENST00000367500 TOP2AP11388 1531 aaKnown RBP15.65■□□□□ 0.1
SWT1-201ENST00000367500 SUPT16HQ9Y5B9 1047 aaKnown RBP15.62■□□□□ 0.09
SWT1-201ENST00000367500 HMGXB3Q12766 1538 aa15.6■□□□□ 0.09
SWT1-201ENST00000367500 SMARCA2P51531 1590 aa15.6■□□□□ 0.09
SWT1-201ENST00000367500 ATAD2BQ9ULI0 1458 aa15.54■□□□□ 0.08
SWT1-201ENST00000367500 NCAPD3P42695 1498 aa15.49■□□□□ 0.07
SWT1-201ENST00000367500 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
SWT1-201ENST00000367500 BCANQ96GW7 911 aa15.48■□□□□ 0.07
SWT1-201ENST00000367500 ERICH6Q7L0X2 663 aa15.47■□□□□ 0.07
SWT1-201ENST00000367500 PRDM2Q13029 1718 aa15.47■□□□□ 0.07
SWT1-201ENST00000367500 CC2D2AQ9P2K1 1620 aa15.46■□□□□ 0.07
SWT1-201ENST00000367500 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
SWT1-201ENST00000367500 RANGAP1P46060 587 aaPredicted RBP15.31■□□□□ 0.04
SWT1-201ENST00000367500 ANO8Q9HCE9 1232 aaPredicted RBP15.31■□□□□ 0.04
SWT1-201ENST00000367500 CLSPNQ9HAW4 1339 aa15.3■□□□□ 0.04
SWT1-201ENST00000367500 BAZ1BQ9UIG0 1483 aaKnown RBP15.29■□□□□ 0.04
SWT1-201ENST00000367500 RBM19Q9Y4C8 960 aaKnown RBP15.29■□□□□ 0.04
SWT1-201ENST00000367500 FKBP8Q14318 412 aa15.22■□□□□ 0.03
SWT1-201ENST00000367500 APLP2Q06481 763 aa15.21■□□□□ 0.03
SWT1-201ENST00000367500 ITGAEP38570 1179 aa15.2■□□□□ 0.02
SWT1-201ENST00000367500 MSH5O43196 834 aa15.19■□□□□ 0.02
SWT1-201ENST00000367500 HNRNPUL2Q1KMD3 747 aaKnown RBP15.16■□□□□ 0.02
SWT1-201ENST00000367500 CCDC136Q96JN2 1154 aa15.13■□□□□ 0.01
SWT1-201ENST00000367500 CFTRP13569 1480 aa15.11■□□□□ 0.01
SWT1-201ENST00000367500 DEKP35659 375 aaKnown RBP15.11■□□□□ 0.01
SWT1-201ENST00000367500 BIVM-ERCC5R4GMW8 1640 aa15.1■□□□□ 0.01
SWT1-201ENST00000367500 SALL2Q9Y467 1007 aaPredicted RBP15.09■□□□□ 0.01
SWT1-201ENST00000367500 KCNH8Q96L42 1107 aa15.08■□□□□ 0
SWT1-201ENST00000367500 NEFLP07196 543 aa15.05■□□□□ -0
SWT1-201ENST00000367500 LAMC3Q9Y6N6 1575 aa15.03■□□□□ -0
SWT1-201ENST00000367500 TOP2BQ02880 1626 aa14.98□□□□□ -0.01
SWT1-201ENST00000367500 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.97□□□□□ -0.01
SWT1-201ENST00000367500 SYNJ1O43426 1573 aa14.96□□□□□ -0.01
SWT1-201ENST00000367500 NBR1Q14596 966 aa14.96□□□□□ -0.01
SWT1-201ENST00000367500 RTN4Q9NQC3 1192 aaKnown RBP14.96□□□□□ -0.01
SWT1-201ENST00000367500 KIF21AQ7Z4S6 1674 aa14.92□□□□□ -0.02
SWT1-201ENST00000367500 ABCC8Q09428 1581 aa14.92□□□□□ -0.02
SWT1-201ENST00000367500 WDR97A6NE52 1622 aa14.91□□□□□ -0.02
SWT1-201ENST00000367500 CADPSQ9ULU8 1353 aa14.88□□□□□ -0.03
SWT1-201ENST00000367500 TRIM52Q96A61 297 aa14.87□□□□□ -0.03
SWT1-201ENST00000367500 MYT1LQ9UL68 1186 aa14.87□□□□□ -0.03
SWT1-201ENST00000367500 FANCIQ9NVI1 1328 aa14.86□□□□□ -0.03
SWT1-201ENST00000367500 CUX1P39880 1505 aa14.86□□□□□ -0.03
SWT1-201ENST00000367500 CDK11AQ9UQ88 783 aaPredicted RBP14.85□□□□□ -0.03
SWT1-201ENST00000367500 UBTFP17480 764 aaKnown RBP14.84□□□□□ -0.03
SWT1-201ENST00000367500 IRX6P78412 446 aaPredicted RBP14.84□□□□□ -0.03
SWT1-201ENST00000367500 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
SWT1-201ENST00000367500 IL27Q8NEV9 243 aa14.83□□□□□ -0.03
SWT1-201ENST00000367500 UBE2Q2Q8WVN8 375 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms